RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 SCAPERQ9BY12 1400 aa20.65■□□□□ 0.9
SNORD88B-201ENST00000408454 ARHGAP5Q13017 1502 aa20.64■□□□□ 0.9
SNORD88B-201ENST00000408454 FRMPD1Q5SYB0 1578 aa20.63■□□□□ 0.89
SNORD88B-201ENST00000408454 PCF11O94913 1555 aaKnown RBP20.61■□□□□ 0.89
SNORD88B-201ENST00000408454 MYT1LQ9UL68 1186 aa20.58■□□□□ 0.89
SNORD88B-201ENST00000408454 BCORL1Q5H9F3 1711 aa20.57■□□□□ 0.88
SNORD88B-201ENST00000408454 ADAMTSL3P82987 1691 aa20.57■□□□□ 0.88
SNORD88B-201ENST00000408454 PTPRMP28827 1452 aa20.56■□□□□ 0.88
SNORD88B-201ENST00000408454 C9orf84Q5VXU9 1444 aa20.55■□□□□ 0.88
SNORD88B-201ENST00000408454 ATP10AO60312 1499 aa20.54■□□□□ 0.88
SNORD88B-201ENST00000408454 PREX2Q70Z35 1606 aa20.53■□□□□ 0.88
SNORD88B-201ENST00000408454 MTUS2Q5JR59 1369 aa20.53■□□□□ 0.88
SNORD88B-201ENST00000408454 HECW2Q9P2P5 1572 aa20.53■□□□□ 0.88
SNORD88B-201ENST00000408454 PLEKHH2Q8IVE3 1493 aa20.52■□□□□ 0.88
SNORD88B-201ENST00000408454 KDM5CP41229 1560 aa20.49■□□□□ 0.87
SNORD88B-201ENST00000408454 ESF1Q9H501 851 aaKnown RBP20.48■□□□□ 0.87
SNORD88B-201ENST00000408454 MADDQ8WXG6 1647 aa20.47■□□□□ 0.87
SNORD88B-201ENST00000408454 MLH3Q9UHC1 1453 aa20.47■□□□□ 0.87
SNORD88B-201ENST00000408454 CCNB3Q8WWL7 1395 aa20.46■□□□□ 0.87
SNORD88B-201ENST00000408454 CEP162Q5TB80 1403 aa20.46■□□□□ 0.87
SNORD88B-201ENST00000408454 YEATS2Q9ULM3 1422 aa20.46■□□□□ 0.87
SNORD88B-201ENST00000408454 LRRIQ1Q96JM4 1722 aa20.46■□□□□ 0.87
SNORD88B-201ENST00000408454 REREQ9P2R6 1566 aa20.46■□□□□ 0.87
SNORD88B-201ENST00000408454 ABCC1P33527 1531 aa20.45■□□□□ 0.86
SNORD88B-201ENST00000408454 EHBP1L1Q8N3D4 1523 aa20.43■□□□□ 0.86
SNORD88B-201ENST00000408454 CFDP1Q9UEE9 299 aaPredicted RBP20.43■□□□□ 0.86
SNORD88B-201ENST00000408454 CDC42BPBQ9Y5S2 1711 aa20.42■□□□□ 0.86
SNORD88B-201ENST00000408454 RIMS1Q86UR5 1692 aaKnown RBP20.42■□□□□ 0.86
SNORD88B-201ENST00000408454 AFAP1Q8N556 730 aa20.41■□□□□ 0.86
SNORD88B-201ENST00000408454 KIAA1107Q9UPP5 1409 aa20.41■□□□□ 0.86
SNORD88B-201ENST00000408454 ITSN2Q9NZM3 1697 aa20.39■□□□□ 0.86
SNORD88B-201ENST00000408454 ZNF777Q9ULD5 760 aaPredicted RBP20.39■□□□□ 0.85
SNORD88B-201ENST00000408454 FER1L4A9Z1Z3 1794 aa20.39■□□□□ 0.85
SNORD88B-201ENST00000408454 CDC42BPAQ5VT25 1732 aa20.39■□□□□ 0.85
SNORD88B-201ENST00000408454 MLECQ14165 292 aa20.38■□□□□ 0.85
SNORD88B-201ENST00000408454 AGLP35573 1532 aa20.37■□□□□ 0.85
SNORD88B-201ENST00000408454 ARHGEF12Q9NZN5 1544 aa20.37■□□□□ 0.85
SNORD88B-201ENST00000408454 GPATCH8Q9UKJ3 1502 aaKnown RBP20.37■□□□□ 0.85
SNORD88B-201ENST00000408454 CNTLNQ9NXG0 1405 aa20.37■□□□□ 0.85
SNORD88B-201ENST00000408454 SPAG9O60271 1321 aaKnown RBP20.37■□□□□ 0.85
SNORD88B-201ENST00000408454 DIP2CQ9Y2E4 1556 aa20.35■□□□□ 0.85
SNORD88B-201ENST00000408454 RSPH4AQ5TD94 716 aa20.35■□□□□ 0.85
SNORD88B-201ENST00000408454 TRAPPC8Q9Y2L5 1435 aa20.32■□□□□ 0.84
SNORD88B-201ENST00000408454 SYCP2Q9BX26 1530 aa20.31■□□□□ 0.84
SNORD88B-201ENST00000408454 APLP2Q06481 763 aa20.3■□□□□ 0.84
SNORD88B-201ENST00000408454 SUPT6HQ7KZ85 1726 aaKnown RBP20.3■□□□□ 0.84
SNORD88B-201ENST00000408454 SAMD9LQ8IVG5 1584 aa20.29■□□□□ 0.84
SNORD88B-201ENST00000408454 VPS8Q8N3P4 1428 aa20.29■□□□□ 0.84
SNORD88B-201ENST00000408454 LMTK3Q96Q04 1460 aa20.29■□□□□ 0.84
SNORD88B-201ENST00000408454 ABCA6Q8N139 1617 aa20.28■□□□□ 0.84
SNORD88B-201ENST00000408454 PPP6R1Q9UPN7 881 aa20.28■□□□□ 0.84
SNORD88B-201ENST00000408454 DMRT2Q9Y5R5 561 aa20.28■□□□□ 0.84
SNORD88B-201ENST00000408454 ATP7AQ04656 1500 aa20.27■□□□□ 0.83
SNORD88B-201ENST00000408454 UHRF1BP1Q6BDS2 1440 aa20.27■□□□□ 0.83
SNORD88B-201ENST00000408454 PLPPR3Q6T4P5 718 aa20.25■□□□□ 0.83
SNORD88B-201ENST00000408454 MAP3K1Q13233 1512 aa20.25■□□□□ 0.83
SNORD88B-201ENST00000408454 RTEL1-TNFRSF6BF6WH68 1400 aa20.25■□□□□ 0.83
SNORD88B-201ENST00000408454 PREX1Q8TCU6 1659 aa20.25■□□□□ 0.83
SNORD88B-201ENST00000408454 KIDINS220Q9ULH0 1771 aa20.24■□□□□ 0.83
SNORD88B-201ENST00000408454 HNRNPMP52272 730 aaKnown RBP eCLIP20.24■□□□□ 0.83
SNORD88B-201ENST00000408454 TIAM1Q13009 1591 aa20.24■□□□□ 0.83
SNORD88B-201ENST00000408454 A2MP01023 1474 aa20.22■□□□□ 0.83
SNORD88B-201ENST00000408454 INO80Q9ULG1 1556 aaPredicted RBP20.21■□□□□ 0.83
SNORD88B-201ENST00000408454 NCOA2Q15596 1464 aa20.21■□□□□ 0.83
SNORD88B-201ENST00000408454 ADGBQ8N7X0 1667 aa20.2■□□□□ 0.82
SNORD88B-201ENST00000408454 TSPY4P0CV99 314 aa20.2■□□□□ 0.82
SNORD88B-201ENST00000408454 TSPY10P0CW01 314 aa20.2■□□□□ 0.82
SNORD88B-201ENST00000408454 SIGLEC1Q9BZZ2 1709 aa20.19■□□□□ 0.82
SNORD88B-201ENST00000408454 CCDC141Q6ZP82 1450 aa20.19■□□□□ 0.82
SNORD88B-201ENST00000408454 SETD1BQ9UPS6 1966 aaKnown RBP20.18■□□□□ 0.82
SNORD88B-201ENST00000408454 MROH2AA6NES4 1674 aa20.18■□□□□ 0.82
SNORD88B-201ENST00000408454 NPATQ14207 1427 aa20.18■□□□□ 0.82
SNORD88B-201ENST00000408454 FAM135AQ9P2D6 1515 aa20.17■□□□□ 0.82
SNORD88B-201ENST00000408454 LRRC9Q6ZRR7 1453 aa20.17■□□□□ 0.82
SNORD88B-201ENST00000408454 PLXNC1O60486 1568 aa20.14■□□□□ 0.81
SNORD88B-201ENST00000408454 CAMSAP2Q08AD1 1489 aa20.13■□□□□ 0.81
SNORD88B-201ENST00000408454 MIA2Q96PC5 1412 aa20.13■□□□□ 0.81
SNORD88B-201ENST00000408454 FBXO41Q8TF61 875 aa20.13■□□□□ 0.81
SNORD88B-201ENST00000408454 MBD5Q9P267 1494 aa20.12■□□□□ 0.81
SNORD88B-201ENST00000408454 ILDR1Q86SU0 546 aaPredicted RBP20.12■□□□□ 0.81
SNORD88B-201ENST00000408454 ARHGEF5Q12774 1597 aa20.12■□□□□ 0.81
SNORD88B-201ENST00000408454 DHX29Q7Z478 1369 aaKnown RBP20.11■□□□□ 0.81
SNORD88B-201ENST00000408454 C3P01024 1663 aa20.1■□□□□ 0.81
SNORD88B-201ENST00000408454 CEBPAP49715 358 aaPredicted RBP20.1■□□□□ 0.81
SNORD88B-201ENST00000408454 HSPA2P54652 639 aa20.1■□□□□ 0.81
SNORD88B-201ENST00000408454 LOC105371045A0A1W2PR82 267 aa20.09■□□□□ 0.81
SNORD88B-201ENST00000408454 GGT6Q6P531 493 aa20.09■□□□□ 0.81
SNORD88B-201ENST00000408454 ZMYM3Q14202 1370 aa20.08■□□□□ 0.81
SNORD88B-201ENST00000408454 ZNF644Q9H582 1327 aaPredicted RBP20.06■□□□□ 0.8
SNORD88B-201ENST00000408454 MYOM3Q5VTT5 1437 aa20.06■□□□□ 0.8
SNORD88B-201ENST00000408454 PTPRTO14522 1441 aa20.02■□□□□ 0.8
SNORD88B-201ENST00000408454 KIF3BO15066 747 aa20.02■□□□□ 0.8
SNORD88B-201ENST00000408454 KDM5DQ9BY66 1539 aa20.01■□□□□ 0.79
SNORD88B-201ENST00000408454 CLTCQ00610 1675 aaKnown RBP20■□□□□ 0.79
SNORD88B-201ENST00000408454 MAST1Q9Y2H9 1570 aa20■□□□□ 0.79
SNORD88B-201ENST00000408454 WASHC2CQ9Y4E1 1318 aa20■□□□□ 0.79
SNORD88B-201ENST00000408454 PKD2Q13563 968 aa19.99■□□□□ 0.79
SNORD88B-201ENST00000408454 EIF2AK4Q9P2K8 1649 aaKnown RBP19.96■□□□□ 0.79
SNORD88B-201ENST00000408454 CERKQ8TCT0 537 aa19.96■□□□□ 0.79
SNORD88B-201ENST00000408454 PLA2R1Q13018 1463 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms