RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 NISCHQ9Y2I1 1504 aa31.5■■■□□ 2.63
SNORD88B-201ENST00000408454 CCDC180Q9P1Z9 1646 aa28.31■■■□□ 2.12
SNORD88B-201ENST00000408454 ABCC9O60706 1549 aa27.88■■■□□ 2.05
SNORD88B-201ENST00000408454 RB1CC1Q8TDY2 1594 aa26.87■■□□□ 1.89
SNORD88B-201ENST00000408454 NACADO15069 1562 aa26.74■■□□□ 1.87
SNORD88B-201ENST00000408454 MYO15BQ96JP2 1530 aa26.49■■□□□ 1.83
SNORD88B-201ENST00000408454 DCAF8L2P0C7V8 631 aa26.49■■□□□ 1.83
SNORD88B-201ENST00000408454 DCAF1Q9Y4B6 1507 aa26.19■■□□□ 1.78
SNORD88B-201ENST00000408454 ZCCHC6Q5VYS8 1495 aaKnown RBP26.16■■□□□ 1.78
SNORD88B-201ENST00000408454 UNC13AQ9UPW8 1703 aa25.93■■□□□ 1.74
SNORD88B-201ENST00000408454 SHROOM4Q9ULL8 1493 aa25.92■■□□□ 1.74
SNORD88B-201ENST00000408454 PABPN1Q86U42 306 aaKnown RBP eCLIP25.91■■□□□ 1.74
SNORD88B-201ENST00000408454 BICRAQ9NZM4 1560 aa25.78■■□□□ 1.72
SNORD88B-201ENST00000408454 DNAJC5BQ9UF47 199 aa25.71■■□□□ 1.71
SNORD88B-201ENST00000408454 SCRIBQ14160 1630 aa25.61■■□□□ 1.69
SNORD88B-201ENST00000408454 EIF4G1Q04637 1599 aaKnown RBP25.27■■□□□ 1.64
SNORD88B-201ENST00000408454 CC2D2AQ9P2K1 1620 aa25.23■■□□□ 1.63
SNORD88B-201ENST00000408454 CECR2Q9BXF3 1484 aa25.2■■□□□ 1.62
SNORD88B-201ENST00000408454 SMARCA2P51531 1590 aa24.6■■□□□ 1.53
SNORD88B-201ENST00000408454 NCAPD3P42695 1498 aa24.6■■□□□ 1.53
SNORD88B-201ENST00000408454 BAZ1AQ9NRL2 1556 aaPredicted RBP24.56■■□□□ 1.52
SNORD88B-201ENST00000408454 SMARCA4P51532 1647 aa24.52■■□□□ 1.52
SNORD88B-201ENST00000408454 ATAD2BQ9ULI0 1458 aa24.49■■□□□ 1.51
SNORD88B-201ENST00000408454 HMGXB3Q12766 1538 aa24.49■■□□□ 1.51
SNORD88B-201ENST00000408454 BAZ1BQ9UIG0 1483 aaKnown RBP24.36■■□□□ 1.49
SNORD88B-201ENST00000408454 PEG3Q9GZU2 1588 aa24.34■■□□□ 1.49
SNORD88B-201ENST00000408454 ERCC6Q03468 1493 aa24.27■■□□□ 1.48
SNORD88B-201ENST00000408454 CUX2O14529 1486 aa24.18■■□□□ 1.46
SNORD88B-201ENST00000408454 MROH2BQ7Z745 1585 aa24.15■■□□□ 1.46
SNORD88B-201ENST00000408454 LAMC3Q9Y6N6 1575 aa24.08■■□□□ 1.45
SNORD88B-201ENST00000408454 PDS5BQ9NTI5 1447 aa24■■□□□ 1.43
SNORD88B-201ENST00000408454 NESP48681 1621 aa23.91■■□□□ 1.42
SNORD88B-201ENST00000408454 CADPSQ9ULU8 1353 aa23.87■■□□□ 1.41
SNORD88B-201ENST00000408454 WIZO95785 1651 aa23.85■■□□□ 1.41
SNORD88B-201ENST00000408454 RSF1Q96T23 1441 aaPredicted RBP23.78■■□□□ 1.4
SNORD88B-201ENST00000408454 DNAJC5Q9H3Z4 198 aa23.77■■□□□ 1.4
SNORD88B-201ENST00000408454 TOP2AP11388 1531 aaKnown RBP23.74■■□□□ 1.39
SNORD88B-201ENST00000408454 THOC2Q8NI27 1593 aaKnown RBP23.74■■□□□ 1.39
SNORD88B-201ENST00000408454 KIF21AQ7Z4S6 1674 aa23.68■■□□□ 1.38
SNORD88B-201ENST00000408454 MRC2Q9UBG0 1479 aa23.67■■□□□ 1.38
SNORD88B-201ENST00000408454 CEP164Q9UPV0 1460 aa23.66■■□□□ 1.38
SNORD88B-201ENST00000408454 CFTRP13569 1480 aa23.62■■□□□ 1.37
SNORD88B-201ENST00000408454 FANCD2Q9BXW9 1451 aa23.57■■□□□ 1.36
SNORD88B-201ENST00000408454 WDR62O43379 1518 aa23.56■■□□□ 1.36
SNORD88B-201ENST00000408454 PRDM2Q13029 1718 aa23.42■■□□□ 1.34
SNORD88B-201ENST00000408454 CCDC88BA6NC98 1476 aa23.36■■□□□ 1.33
SNORD88B-201ENST00000408454 ABCC8Q09428 1581 aa23.34■■□□□ 1.33
SNORD88B-201ENST00000408454 URB2Q14146 1524 aaKnown RBP23.24■■□□□ 1.31
SNORD88B-201ENST00000408454 IFT140Q96RY7 1462 aa23.18■■□□□ 1.3
SNORD88B-201ENST00000408454 DNMBPQ6XZF7 1577 aa23.11■■□□□ 1.29
SNORD88B-201ENST00000408454 TOPBP1Q92547 1522 aa23.11■■□□□ 1.29
SNORD88B-201ENST00000408454 OSCARQ8IYS5 282 aa23.08■■□□□ 1.29
SNORD88B-201ENST00000408454 WDR97A6NE52 1622 aa22.93■■□□□ 1.26
SNORD88B-201ENST00000408454 SUPT5HO00267 1087 aaKnown RBP22.89■■□□□ 1.25
SNORD88B-201ENST00000408454 POLA1P09884 1462 aaPredicted RBP22.88■■□□□ 1.25
SNORD88B-201ENST00000408454 EIF4G3O43432 1585 aaKnown RBP22.88■■□□□ 1.25
SNORD88B-201ENST00000408454 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
SNORD88B-201ENST00000408454 SOGA1O94964 1423 aa22.84■■□□□ 1.25
SNORD88B-201ENST00000408454 TARBP1Q13395 1621 aaKnown RBP22.83■■□□□ 1.25
SNORD88B-201ENST00000408454 TRIM41Q8WV44 630 aa22.78■■□□□ 1.24
SNORD88B-201ENST00000408454 FGD5Q6ZNL6 1462 aa22.77■■□□□ 1.24
SNORD88B-201ENST00000408454 AQRO60306 1485 aaKnown RBP eCLIP22.73■■□□□ 1.231e-12■■■■□ 22
SNORD88B-201ENST00000408454 CUX1P39880 1505 aa22.71■■□□□ 1.23
SNORD88B-201ENST00000408454 MAGI1Q96QZ7 1491 aaPredicted RBP22.69■■□□□ 1.22
SNORD88B-201ENST00000408454 GRIN2BQ13224 1484 aa22.68■■□□□ 1.22
SNORD88B-201ENST00000408454 FBLN2P98095 1184 aa22.68■■□□□ 1.22
SNORD88B-201ENST00000408454 RAD54L2Q9Y4B4 1467 aa22.67■■□□□ 1.22
SNORD88B-201ENST00000408454 TDRD9Q8NDG6 1382 aaKnown RBP22.66■■□□□ 1.22
SNORD88B-201ENST00000408454 CHMP7Q8WUX9 453 aaPredicted RBP22.63■■□□□ 1.21
SNORD88B-201ENST00000408454 WRNQ14191 1432 aaPredicted RBP eCLIP22.63■■□□□ 1.21
SNORD88B-201ENST00000408454 CHD1O14646 1710 aa22.6■■□□□ 1.21
SNORD88B-201ENST00000408454 SNAPC4Q5SXM2 1469 aa22.6■■□□□ 1.21
SNORD88B-201ENST00000408454 ARHGEF11O15085 1522 aa22.59■■□□□ 1.21
SNORD88B-201ENST00000408454 SYNJ1O43426 1573 aa22.59■■□□□ 1.21
SNORD88B-201ENST00000408454 ABCA10Q8WWZ4 1543 aa22.58■■□□□ 1.21
SNORD88B-201ENST00000408454 RIMBP3CA6NJZ7 1639 aa22.58■■□□□ 1.21
SNORD88B-201ENST00000408454 RIMBP3BA6NNM3 1639 aa22.58■■□□□ 1.21
SNORD88B-201ENST00000408454 RIMBP3Q9UFD9 1639 aa22.58■■□□□ 1.21
SNORD88B-201ENST00000408454 GAPVD1Q14C86 1478 aa22.58■■□□□ 1.2
SNORD88B-201ENST00000408454 SYNJ2O15056 1496 aa22.57■■□□□ 1.2
SNORD88B-201ENST00000408454 TOP2BQ02880 1626 aa22.52■■□□□ 1.2
SNORD88B-201ENST00000408454 BIVM-ERCC5R4GMW8 1640 aa22.49■■□□□ 1.19
SNORD88B-201ENST00000408454 PBRM1Q86U86 1689 aa22.49■■□□□ 1.19
SNORD88B-201ENST00000408454 ABCA5Q8WWZ7 1642 aa22.47■■□□□ 1.19
SNORD88B-201ENST00000408454 CLASP1Q7Z460 1538 aa22.41■■□□□ 1.18
SNORD88B-201ENST00000408454 CYB5RLQ6IPT4 315 aa22.4■■□□□ 1.18
SNORD88B-201ENST00000408454 ERICH3Q5RHP9 1530 aa22.37■■□□□ 1.17
SNORD88B-201ENST00000408454 FHAD1B1AJZ9 1412 aa22.35■■□□□ 1.17
SNORD88B-201ENST00000408454 GRIN2AQ12879 1464 aa22.33■■□□□ 1.16
SNORD88B-201ENST00000408454 ARAP1Q96P48 1450 aa22.32■■□□□ 1.16
SNORD88B-201ENST00000408454 ADAMTS12P58397 1594 aa22.3■■□□□ 1.16
SNORD88B-201ENST00000408454 NUP160Q12769 1436 aa22.23■■□□□ 1.15
SNORD88B-201ENST00000408454 KIF27Q86VH2 1401 aa22.21■■□□□ 1.15
SNORD88B-201ENST00000408454 TRHP20396 242 aaPredicted RBP22.19■■□□□ 1.14
SNORD88B-201ENST00000408454 CEP170Q5SW79 1584 aa22.12■■□□□ 1.13
SNORD88B-201ENST00000408454 CUL7Q14999 1698 aa22.11■■□□□ 1.13
SNORD88B-201ENST00000408454 SHROOM2Q13796 1616 aa22.07■■□□□ 1.12
SNORD88B-201ENST00000408454 JPH4Q96JJ6 628 aa22.02■■□□□ 1.12
SNORD88B-201ENST00000408454 PRG4Q92954 1404 aaPredicted RBP21.99■■□□□ 1.11
SNORD88B-201ENST00000408454 IGF1RP08069 1367 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms