RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 CIZ1Q9ULV3 898 aaPredicted RBP9.27□□□□□ -0.93
MIR548I3-201ENST00000408378 POTEEQ6S8J3 1075 aa9.25□□□□□ -0.93
MIR548I3-201ENST00000408378 FBXO3Q9UK99 471 aa9.25□□□□□ -0.93
MIR548I3-201ENST00000408378 NUDT7P0C024 238 aa9.24□□□□□ -0.93
MIR548I3-201ENST00000408378 PBX2P40425 430 aa9.23□□□□□ -0.93
MIR548I3-201ENST00000408378 IRX2Q9BZI1 471 aaPredicted RBP9.23□□□□□ -0.93
MIR548I3-201ENST00000408378 VASPP50552 380 aaPredicted RBP9.21□□□□□ -0.94
MIR548I3-201ENST00000408378 ADGRD1Q6QNK2 874 aa9.19□□□□□ -0.94
MIR548I3-201ENST00000408378 LHX6Q9UPM6 363 aa9.19□□□□□ -0.94
MIR548I3-201ENST00000408378 KCTD12Q96CX2 325 aaKnown RBP9.18□□□□□ -0.94
MIR548I3-201ENST00000408378 MS4A4AQ96JQ5 239 aa9.17□□□□□ -0.94
MIR548I3-201ENST00000408378 PHF8Q9UPP1 1060 aa9.14□□□□□ -0.95
MIR548I3-201ENST00000408378 ARHGAP33O14559 1287 aa9.1□□□□□ -0.95
MIR548I3-201ENST00000408378 PTPN5P54829 565 aa9.1□□□□□ -0.95
MIR548I3-201ENST00000408378 SOX12O15370 315 aa9.09□□□□□ -0.95
MIR548I3-201ENST00000408378 SPOCK2Q92563 424 aa9.09□□□□□ -0.95
MIR548I3-201ENST00000408378 STAC3Q96MF2 364 aa9.09□□□□□ -0.95
MIR548I3-201ENST00000408378 DMRTA1Q5VZB9 504 aa9.08□□□□□ -0.96
MIR548I3-201ENST00000408378 PCDHGA4Q9Y5G9 962 aa9.08□□□□□ -0.96
MIR548I3-201ENST00000408378 PSEN2P49810 448 aa9.07□□□□□ -0.96
MIR548I3-201ENST00000408378 HRO43593 1189 aa9.06□□□□□ -0.96
MIR548I3-201ENST00000408378 C2orf72A6NCS6 295 aa9.04□□□□□ -0.96
MIR548I3-201ENST00000408378 RGS20O76081 388 aa9.04□□□□□ -0.96
MIR548I3-201ENST00000408378 Q6ZNB5 142 aa9.04□□□□□ -0.96
MIR548I3-201ENST00000408378 TK2O00142 265 aa9.02□□□□□ -0.97
MIR548I3-201ENST00000408378 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9□□□□□ -0.97
MIR548I3-201ENST00000408378 A0A0G2JS52 829 aa9□□□□□ -0.97
MIR548I3-201ENST00000408378 ZFP91Q96JP5 570 aaPredicted RBP9□□□□□ -0.97
MIR548I3-201ENST00000408378 IFNLR1Q8IU57 520 aaPredicted RBP8.99□□□□□ -0.97
MIR548I3-201ENST00000408378 KIF3CO14782 793 aa8.97□□□□□ -0.97
MIR548I3-201ENST00000408378 PSDA5PKW4 1024 aaPredicted RBP8.95□□□□□ -0.98
MIR548I3-201ENST00000408378 NLRP6P59044 892 aa8.95□□□□□ -0.98
MIR548I3-201ENST00000408378 SLC34A2O95436 690 aa8.94□□□□□ -0.98
MIR548I3-201ENST00000408378 RIOK3O14730 519 aaKnown RBP8.93□□□□□ -0.98
MIR548I3-201ENST00000408378 IFFO2Q5TF58 517 aa8.93□□□□□ -0.98
MIR548I3-201ENST00000408378 KCNK17Q96T54 332 aa8.92□□□□□ -0.98
MIR548I3-201ENST00000408378 FBXO22Q8NEZ5 403 aa8.91□□□□□ -0.98
MIR548I3-201ENST00000408378 TRIM41Q8WV44 630 aa8.91□□□□□ -0.98
MIR548I3-201ENST00000408378 PPP4R3BQ5MIZ7 849 aa8.9□□□□□ -0.98
MIR548I3-201ENST00000408378 TMC2Q8TDI7 906 aa8.9□□□□□ -0.98
MIR548I3-201ENST00000408378 RNF25Q96BH1 459 aaPredicted RBP8.89□□□□□ -0.99
MIR548I3-201ENST00000408378 VGFO15240 615 aaPredicted RBP8.88□□□□□ -0.99
MIR548I3-201ENST00000408378 THSD4Q6ZMP0 1018 aa8.88□□□□□ -0.99
MIR548I3-201ENST00000408378 KCNH8Q96L42 1107 aa8.87□□□□□ -0.99
MIR548I3-201ENST00000408378 GOLGA8CPA6NN73 597 aa8.86□□□□□ -0.99
MIR548I3-201ENST00000408378 VPS9D1Q9Y2B5 631 aa8.86□□□□□ -0.99
MIR548I3-201ENST00000408378 WNT2BQ93097 391 aa8.84□□□□□ -0.99
MIR548I3-201ENST00000408378 MFRPQ9BY79 579 aa8.83□□□□□ -1
MIR548I3-201ENST00000408378 BCL11BQ9C0K0 894 aaPredicted RBP8.83□□□□□ -1
MIR548I3-201ENST00000408378 KDM4FA0A1W2PPD8 638 aa8.82□□□□□ -1
MIR548I3-201ENST00000408378 STK24Q9Y6E0 443 aa8.81□□□□□ -1
MIR548I3-201ENST00000408378 LCE2BO14633 110 aa8.79□□□□□ -1
MIR548I3-201ENST00000408378 TRAF7Q6Q0C0 670 aa8.77□□□□□ -1.01
MIR548I3-201ENST00000408378 MRPL50Q8N5N7 158 aaKnown RBP8.77□□□□□ -1.01
MIR548I3-201ENST00000408378 PTCD2Q8WV60 388 aaKnown RBP8.76□□□□□ -1.01
MIR548I3-201ENST00000408378 BHMG1C9JSJ3 638 aaPredicted RBP8.73□□□□□ -1.01
MIR548I3-201ENST00000408378 GFRA3O60609 400 aa8.72□□□□□ -1.01
MIR548I3-201ENST00000408378 ZNF454Q8N9F8 522 aa8.72□□□□□ -1.01
MIR548I3-201ENST00000408378 TBC1D12O60347 775 aa8.71□□□□□ -1.02
MIR548I3-201ENST00000408378 PLPP6Q8IY26 295 aa8.71□□□□□ -1.02
MIR548I3-201ENST00000408378 LAPTM4AQ15012 233 aa8.7□□□□□ -1.02
MIR548I3-201ENST00000408378 STK25O00506 426 aa8.69□□□□□ -1.02
MIR548I3-201ENST00000408378 ITGBL1O95965 494 aaPredicted RBP8.68□□□□□ -1.02
MIR548I3-201ENST00000408378 SLC4A5Q9BY07 1137 aa8.68□□□□□ -1.02
MIR548I3-201ENST00000408378 ZBED2Q9BTP6 218 aa8.67□□□□□ -1.02
MIR548I3-201ENST00000408378 PPP1R37O75864 691 aa8.66□□□□□ -1.02
MIR548I3-201ENST00000408378 PTPREP23469 700 aa8.66□□□□□ -1.02
MIR548I3-201ENST00000408378 NBPF3Q9H094 633 aa8.66□□□□□ -1.02
MIR548I3-201ENST00000408378 BCL2L12Q9HB09 334 aa8.66□□□□□ -1.02
MIR548I3-201ENST00000408378 ZNF787Q6DD87 383 aa8.65□□□□□ -1.02
MIR548I3-201ENST00000408378 UPF1Q92900 1129 aaKnown RBP eCLIP8.65□□□□□ -1.02
MIR548I3-201ENST00000408378 BCAMP50895 628 aa8.64□□□□□ -1.03
MIR548I3-201ENST00000408378 TAOK2Q9UL54 1235 aa8.64□□□□□ -1.03
MIR548I3-201ENST00000408378 FOXK1P85037 733 aa8.63□□□□□ -1.03
MIR548I3-201ENST00000408378 ANKK1Q8NFD2 765 aa8.63□□□□□ -1.03
MIR548I3-201ENST00000408378 KCNC4Q03721 635 aa8.62□□□□□ -1.03
MIR548I3-201ENST00000408378 DSG2Q14126 1118 aa8.62□□□□□ -1.03
MIR548I3-201ENST00000408378 ZNF775Q96BV0 537 aaPredicted RBP8.61□□□□□ -1.03
MIR548I3-201ENST00000408378 NRG2O14511 850 aaPredicted RBP8.56□□□□□ -1.04
MIR548I3-201ENST00000408378 FOSBP53539 338 aa8.56□□□□□ -1.04
MIR548I3-201ENST00000408378 GPHNQ9NQX3 736 aaPredicted RBP8.56□□□□□ -1.04
MIR548I3-201ENST00000408378 WBP1LQ9NX94 342 aa8.56□□□□□ -1.04
MIR548I3-201ENST00000408378 PROX2Q3B8N5 592 aa8.54□□□□□ -1.04
MIR548I3-201ENST00000408378 ADAM33Q9BZ11 813 aa8.54□□□□□ -1.04
MIR548I3-201ENST00000408378 PRKD2Q9BZL6 878 aa8.54□□□□□ -1.04
MIR548I3-201ENST00000408378 OXER1Q8TDS5 423 aa8.53□□□□□ -1.04
MIR548I3-201ENST00000408378 SOWAHBA6NEL2 793 aa8.52□□□□□ -1.05
MIR548I3-201ENST00000408378 ZDHHC16Q969W1 377 aa8.51□□□□□ -1.05
MIR548I3-201ENST00000408378 NYAP1Q6ZVC0 841 aa8.49□□□□□ -1.05
MIR548I3-201ENST00000408378 RABGEF1Q9UJ41 708 aa8.49□□□□□ -1.05
MIR548I3-201ENST00000408378 JPH4Q96JJ6 628 aa8.48□□□□□ -1.05
MIR548I3-201ENST00000408378 ZFRQ96KR1 1074 aaKnown RBP8.47□□□□□ -1.05
MIR548I3-201ENST00000408378 SEPT9Q9UHD8 586 aaPredicted RBP8.46□□□□□ -1.06
MIR548I3-201ENST00000408378 PPP1R3GB7ZBB8 358 aa8.45□□□□□ -1.06
MIR548I3-201ENST00000408378 PDZRN3Q9UPQ7 1066 aa8.45□□□□□ -1.06
MIR548I3-201ENST00000408378 COL9A1P20849 921 aa8.44□□□□□ -1.06
MIR548I3-201ENST00000408378 HPS5Q9UPZ3 1129 aa8.44□□□□□ -1.06
MIR548I3-201ENST00000408378 EVI5O60447 810 aa8.43□□□□□ -1.06
MIR548I3-201ENST00000408378 KIAA1468Q9P260 1216 aa8.43□□□□□ -1.06
MIR548I3-201ENST00000408378 ECM2O94769 699 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms