RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 NUP153P49790 1475 aaKnown RBP23.36■■□□□ 1.33
COL23A1-202ENST00000407622 FOXD1Q16676 465 aa23.35■■□□□ 1.33
COL23A1-202ENST00000407622 MPHOSPH9Q99550 1183 aa23.34■■□□□ 1.33
COL23A1-202ENST00000407622 ZNF644Q9H582 1327 aaPredicted RBP23.33■■□□□ 1.33
COL23A1-202ENST00000407622 SHROOM2Q13796 1616 aa23.33■■□□□ 1.32
COL23A1-202ENST00000407622 DAPK1P53355 1430 aa23.32■■□□□ 1.32
COL23A1-202ENST00000407622 RAPGEF6Q8TEU7 1601 aa23.31■■□□□ 1.32
COL23A1-202ENST00000407622 PLB1Q6P1J6 1458 aa23.3■■□□□ 1.32
COL23A1-202ENST00000407622 CLASP1Q7Z460 1538 aa23.3■■□□□ 1.32
COL23A1-202ENST00000407622 ABCC5O15440 1437 aa23.29■■□□□ 1.32
COL23A1-202ENST00000407622 HSPA5P11021 654 aaKnown RBP23.28■■□□□ 1.32
COL23A1-202ENST00000407622 DNMT1P26358 1616 aaKnown RBP23.28■■□□□ 1.32
COL23A1-202ENST00000407622 WASHC2AQ641Q2 1341 aa23.26■■□□□ 1.31
COL23A1-202ENST00000407622 L3MBTL2Q969R5 705 aa23.25■■□□□ 1.31
COL23A1-202ENST00000407622 BCANQ96GW7 911 aa23.25■■□□□ 1.31
COL23A1-202ENST00000407622 ROCK1Q13464 1354 aa23.24■■□□□ 1.31
COL23A1-202ENST00000407622 PTPRGP23470 1445 aa23.24■■□□□ 1.31
COL23A1-202ENST00000407622 FKBP8Q14318 412 aa23.22■■□□□ 1.31
COL23A1-202ENST00000407622 ABCA8O94911 1581 aa23.21■■□□□ 1.31
COL23A1-202ENST00000407622 ERCC6L2Q5T890 1561 aa23.21■■□□□ 1.31
COL23A1-202ENST00000407622 ANKRD30BQ9BXX2 1392 aa23.2■■□□□ 1.3
COL23A1-202ENST00000407622 EIF4G2P78344 907 aaKnown RBP eCLIP23.17■■□□□ 1.3
COL23A1-202ENST00000407622 TSHZ2Q9NRE2 1034 aa23.17■■□□□ 1.3
COL23A1-202ENST00000407622 CDK11AQ9UQ88 783 aaPredicted RBP23.17■■□□□ 1.3
COL23A1-202ENST00000407622 TROQ12816 1431 aaPredicted RBP23.16■■□□□ 1.3
COL23A1-202ENST00000407622 RPRD2Q5VT52 1461 aaKnown RBP23.16■■□□□ 1.3
COL23A1-202ENST00000407622 KIF14Q15058 1648 aa23.15■■□□□ 1.3
COL23A1-202ENST00000407622 NBPF8Q3BBV2 869 aa23.15■■□□□ 1.3
COL23A1-202ENST00000407622 CAMSAP2Q08AD1 1489 aa23.15■■□□□ 1.3
COL23A1-202ENST00000407622 TEX14Q8IWB6 1497 aa23.15■■□□□ 1.3
COL23A1-202ENST00000407622 C11orf95C9JLR9 678 aaPredicted RBP23.14■■□□□ 1.3
COL23A1-202ENST00000407622 OSCARQ8IYS5 282 aa23.14■■□□□ 1.29
COL23A1-202ENST00000407622 MYT1Q01538 1121 aa23.13■■□□□ 1.29
COL23A1-202ENST00000407622 SLC4A1APQ9BWU0 796 aaKnown RBP23.13■■□□□ 1.29
COL23A1-202ENST00000407622 CFDP1Q9UEE9 299 aaPredicted RBP23.11■■□□□ 1.29
COL23A1-202ENST00000407622 GPATCH8Q9UKJ3 1502 aaKnown RBP23.11■■□□□ 1.29
COL23A1-202ENST00000407622 ATP10BO94823 1461 aa23.1■■□□□ 1.29
COL23A1-202ENST00000407622 PZPP20742 1482 aa23.09■■□□□ 1.29
COL23A1-202ENST00000407622 ITSN2Q9NZM3 1697 aa23.09■■□□□ 1.29
COL23A1-202ENST00000407622 ZNF777Q9ULD5 760 aaPredicted RBP23.09■■□□□ 1.29
COL23A1-202ENST00000407622 CNTLNQ9NXG0 1405 aa23.08■■□□□ 1.29
COL23A1-202ENST00000407622 NCOA1Q15788 1441 aa23.08■■□□□ 1.28
COL23A1-202ENST00000407622 ADCY10Q96PN6 1610 aa23.07■■□□□ 1.28
COL23A1-202ENST00000407622 ADGBQ8N7X0 1667 aa23.06■■□□□ 1.28
COL23A1-202ENST00000407622 CCDC7Q96M83 1385 aa23.06■■□□□ 1.28
COL23A1-202ENST00000407622 HNRNPUQ00839 825 aaKnown RBP eCLIP23.05■■□□□ 1.28
COL23A1-202ENST00000407622 CCDC184Q52MB2 194 aa23.05■■□□□ 1.28
COL23A1-202ENST00000407622 CROCC2H7BZ55 1655 aa23.04■■□□□ 1.28
COL23A1-202ENST00000407622 NEFLP07196 543 aa23.04■■□□□ 1.28
COL23A1-202ENST00000407622 PLEKHD1A6NEE1 506 aa23.02■■□□□ 1.28
COL23A1-202ENST00000407622 SPATA31E1Q6ZUB1 1445 aa23.01■■□□□ 1.27
COL23A1-202ENST00000407622 ABCC2Q92887 1545 aa23■■□□□ 1.27
COL23A1-202ENST00000407622 ADGRL2O95490 1459 aa23■■□□□ 1.27
COL23A1-202ENST00000407622 CDC42BPAQ5VT25 1732 aa22.97■■□□□ 1.27
COL23A1-202ENST00000407622 KIF7Q2M1P5 1343 aa22.97■■□□□ 1.27
COL23A1-202ENST00000407622 PRKRIP1Q9H875 184 aaPredicted RBP22.96■■□□□ 1.27
COL23A1-202ENST00000407622 KIAA1107Q9UPP5 1409 aa22.95■■□□□ 1.26
COL23A1-202ENST00000407622 UHRF1BP1LA0JNW5 1464 aa22.95■■□□□ 1.26
COL23A1-202ENST00000407622 MBD5Q9P267 1494 aa22.94■■□□□ 1.26
COL23A1-202ENST00000407622 POLR1AO95602 1720 aaPredicted RBP22.93■■□□□ 1.26
COL23A1-202ENST00000407622 PKD2Q13563 968 aa22.93■■□□□ 1.26
COL23A1-202ENST00000407622 ABCC10Q5T3U5 1492 aa22.93■■□□□ 1.26
COL23A1-202ENST00000407622 ANKRD30AQ9BXX3 1397 aa22.93■■□□□ 1.26
COL23A1-202ENST00000407622 ANKRD50Q9ULJ7 1429 aa22.92■■□□□ 1.26
COL23A1-202ENST00000407622 ZNF326Q5BKZ1 582 aaKnown RBP22.89■■□□□ 1.25
COL23A1-202ENST00000407622 C9orf84Q5VXU9 1444 aa22.87■■□□□ 1.25
COL23A1-202ENST00000407622 IRX6P78412 446 aaPredicted RBP22.87■■□□□ 1.25
COL23A1-202ENST00000407622 FAM9BQ8IZU0 186 aa22.86■■□□□ 1.25
COL23A1-202ENST00000407622 BCORL1Q5H9F3 1711 aa22.86■■□□□ 1.25
COL23A1-202ENST00000407622 MRS2Q9HD23 443 aa22.85■■□□□ 1.25
COL23A1-202ENST00000407622 SHANK2Q9UPX8 1470 aa22.83■■□□□ 1.25
COL23A1-202ENST00000407622 NUP155O75694 1391 aa22.83■■□□□ 1.25
COL23A1-202ENST00000407622 USP47Q96K76 1375 aa22.83■■□□□ 1.25
COL23A1-202ENST00000407622 ZCCHC11Q5TAX3 1644 aaKnown RBP22.83■■□□□ 1.24
COL23A1-202ENST00000407622 HNRNPMP52272 730 aaKnown RBP eCLIP22.81■■□□□ 1.24
COL23A1-202ENST00000407622 KDM5CP41229 1560 aa22.8■■□□□ 1.24
COL23A1-202ENST00000407622 DHX29Q7Z478 1369 aaKnown RBP22.78■■□□□ 1.24
COL23A1-202ENST00000407622 POLR3GLQ9BT43 218 aa22.77■■□□□ 1.24
COL23A1-202ENST00000407622 CNGB1Q14028 1251 aaPredicted RBP22.77■■□□□ 1.24
COL23A1-202ENST00000407622 KIF15Q9NS87 1388 aa22.77■■□□□ 1.23
COL23A1-202ENST00000407622 TSPY4P0CV99 314 aa22.76■■□□□ 1.23
COL23A1-202ENST00000407622 TSPY10P0CW01 314 aa22.76■■□□□ 1.23
COL23A1-202ENST00000407622 KDM5DQ9BY66 1539 aa22.75■■□□□ 1.23
COL23A1-202ENST00000407622 UHRF1BP1Q6BDS2 1440 aa22.74■■□□□ 1.23
COL23A1-202ENST00000407622 CDC42BPBQ9Y5S2 1711 aa22.73■■□□□ 1.23
COL23A1-202ENST00000407622 SAMD9LQ8IVG5 1584 aa22.73■■□□□ 1.23
COL23A1-202ENST00000407622 ARHGEF5Q12774 1597 aa22.73■■□□□ 1.23
COL23A1-202ENST00000407622 RBM19Q9Y4C8 960 aaKnown RBP22.73■■□□□ 1.23
COL23A1-202ENST00000407622 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.72■■□□□ 1.23
COL23A1-202ENST00000407622 ZBED9Q6R2W3 1325 aa22.72■■□□□ 1.23
COL23A1-202ENST00000407622 RALGAPBQ86X10 1494 aa22.72■■□□□ 1.23
COL23A1-202ENST00000407622 TTC37Q6PGP7 1564 aa22.7■■□□□ 1.22
COL23A1-202ENST00000407622 KDM2AQ9Y2K7 1162 aa22.7■■□□□ 1.22
COL23A1-202ENST00000407622 PREX2Q70Z35 1606 aa22.69■■□□□ 1.22
COL23A1-202ENST00000407622 ARHGEF12Q9NZN5 1544 aa22.69■■□□□ 1.22
COL23A1-202ENST00000407622 CARD11Q9BXL7 1154 aa22.68■■□□□ 1.22
COL23A1-202ENST00000407622 CCDC141Q6ZP82 1450 aa22.67■■□□□ 1.22
COL23A1-202ENST00000407622 WDR7Q9Y4E6 1490 aa22.65■■□□□ 1.22
COL23A1-202ENST00000407622 DCAF11Q8TEB1 546 aa22.65■■□□□ 1.22
COL23A1-202ENST00000407622 FAM135AQ9P2D6 1515 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms