RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 NBR1Q14596 966 aa14.85□□□□□ -0.03
PTPN12-202ENST00000407343 E2F4Q16254 413 aa14.84□□□□□ -0.03
PTPN12-202ENST00000407343 GPHNQ9NQX3 736 aaPredicted RBP14.84□□□□□ -0.03
PTPN12-202ENST00000407343 C7P10643 843 aa14.83□□□□□ -0.04
PTPN12-202ENST00000407343 DDX27Q96GQ7 796 aaKnown RBP14.83□□□□□ -0.04
PTPN12-202ENST00000407343 METRNQ9UJH8 293 aa14.83□□□□□ -0.04
PTPN12-202ENST00000407343 CAMK2BQ13554 666 aa14.81□□□□□ -0.04
PTPN12-202ENST00000407343 KIF3CO14782 793 aa14.8□□□□□ -0.04
PTPN12-202ENST00000407343 SEC24BO95487 1268 aa14.79□□□□□ -0.04
PTPN12-202ENST00000407343 TMEM92Q6UXU6 159 aa14.78□□□□□ -0.04
PTPN12-202ENST00000407343 ARHGEF1Q92888 912 aaKnown RBP14.78□□□□□ -0.04
PTPN12-202ENST00000407343 DSG2Q14126 1118 aa14.76□□□□□ -0.05
PTPN12-202ENST00000407343 PPP1R15BQ5SWA1 713 aa14.76□□□□□ -0.05
PTPN12-202ENST00000407343 L3MBTL3Q96JM7 780 aaPredicted RBP14.76□□□□□ -0.05
PTPN12-202ENST00000407343 PRKCSHP14314 528 aaPredicted RBP14.75□□□□□ -0.05
PTPN12-202ENST00000407343 ARIH1Q9Y4X5 557 aaPredicted RBP14.75□□□□□ -0.05
PTPN12-202ENST00000407343 C2orf72A6NCS6 295 aa14.73□□□□□ -0.05
PTPN12-202ENST00000407343 FOXK1P85037 733 aa14.73□□□□□ -0.05
PTPN12-202ENST00000407343 TMC2Q8TDI7 906 aa14.69□□□□□ -0.06
PTPN12-202ENST00000407343 EMILIN3Q9NT22 766 aa14.68□□□□□ -0.06
PTPN12-202ENST00000407343 G3V3G9 751 aa14.66□□□□□ -0.06
PTPN12-202ENST00000407343 TPRNQ4KMQ1 711 aa14.66□□□□□ -0.06
PTPN12-202ENST00000407343 PLPP6Q8IY26 295 aa14.64□□□□□ -0.07
PTPN12-202ENST00000407343 SEMA3EO15041 775 aa14.62□□□□□ -0.07
PTPN12-202ENST00000407343 TESPA1A2RU30 521 aaPredicted RBP14.61□□□□□ -0.07
PTPN12-202ENST00000407343 POTEJP0CG39 1038 aa14.6□□□□□ -0.07
PTPN12-202ENST00000407343 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.58□□□□□ -0.08
PTPN12-202ENST00000407343 POTEB2H3BUK9 544 aa14.57□□□□□ -0.08
PTPN12-202ENST00000407343 DPYSL4O14531 572 aa14.55□□□□□ -0.08
PTPN12-202ENST00000407343 C3orf67Q6ZVT6 689 aa14.53□□□□□ -0.08
PTPN12-202ENST00000407343 PDIA6Q15084 440 aa14.51□□□□□ -0.09
PTPN12-202ENST00000407343 LMOD2Q6P5Q4 547 aa14.5□□□□□ -0.09
PTPN12-202ENST00000407343 OXER1Q8TDS5 423 aa14.5□□□□□ -0.09
PTPN12-202ENST00000407343 MLLT3P42568 568 aaPredicted RBP14.47□□□□□ -0.09
PTPN12-202ENST00000407343 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.45□□□□□ -0.1
PTPN12-202ENST00000407343 SPDYE16A6NNV3 312 aaPredicted RBP14.44□□□□□ -0.1
PTPN12-202ENST00000407343 UPF1Q92900 1129 aaKnown RBP eCLIP14.43□□□□□ -0.1
PTPN12-202ENST00000407343 SLC34A2O95436 690 aa14.41□□□□□ -0.1
PTPN12-202ENST00000407343 PTCD2Q8WV60 388 aaKnown RBP14.41□□□□□ -0.1
PTPN12-202ENST00000407343 MAP3K9P80192 1104 aa14.37□□□□□ -0.11
PTPN12-202ENST00000407343 TULP1O00294 542 aaPredicted RBP14.33□□□□□ -0.12
PTPN12-202ENST00000407343 PTGER2P43116 358 aa14.33□□□□□ -0.12
PTPN12-202ENST00000407343 SMYD5Q6GMV2 418 aa14.33□□□□□ -0.12
PTPN12-202ENST00000407343 ZC3H15Q8WU90 426 aaKnown RBP14.33□□□□□ -0.12
PTPN12-202ENST00000407343 RBM26Q5T8P6 1007 aaKnown RBP14.32□□□□□ -0.12
PTPN12-202ENST00000407343 KDM4FA0A1W2PPD8 638 aa14.3□□□□□ -0.12
PTPN12-202ENST00000407343 EVI5O60447 810 aa14.3□□□□□ -0.12
PTPN12-202ENST00000407343 HOXB3P14651 431 aaPredicted RBP14.3□□□□□ -0.12
PTPN12-202ENST00000407343 ANO8Q9HCE9 1232 aaPredicted RBP14.29□□□□□ -0.12
PTPN12-202ENST00000407343 PCDHGA4Q9Y5G9 962 aa14.27□□□□□ -0.13
PTPN12-202ENST00000407343 OSBPP22059 807 aa14.26□□□□□ -0.13
PTPN12-202ENST00000407343 SLAIN1Q8ND83 568 aa14.26□□□□□ -0.13
PTPN12-202ENST00000407343 TBC1D12O60347 775 aa14.25□□□□□ -0.13
PTPN12-202ENST00000407343 PRIM1P49642 420 aaKnown RBP14.25□□□□□ -0.13
PTPN12-202ENST00000407343 MAMSTRQ6ZN01 415 aa14.24□□□□□ -0.13
PTPN12-202ENST00000407343 SCUBE2Q9NQ36 999 aa14.24□□□□□ -0.13
PTPN12-202ENST00000407343 GPR37O15354 613 aa14.23□□□□□ -0.13
PTPN12-202ENST00000407343 GRXCR2A6NFK2 248 aa14.22□□□□□ -0.13
PTPN12-202ENST00000407343 ZMYND10O75800 440 aa14.22□□□□□ -0.13
PTPN12-202ENST00000407343 DDX12PQ92771 950 aa14.22□□□□□ -0.13
PTPN12-202ENST00000407343 OTUD5Q96G74 571 aa14.19□□□□□ -0.14
PTPN12-202ENST00000407343 GPIHBP1Q8IV16 184 aa14.18□□□□□ -0.14
PTPN12-202ENST00000407343 GPR153Q6NV75 609 aa14.16□□□□□ -0.14
PTPN12-202ENST00000407343 KHSRPQ92945 711 aaKnown RBP eCLIP14.16□□□□□ -0.149e-7■■■■□ 26.2
PTPN12-202ENST00000407343 DOK7Q18PE1 504 aa14.15□□□□□ -0.14
PTPN12-202ENST00000407343 BARGINQ6ZT62 677 aa14.15□□□□□ -0.14
PTPN12-202ENST00000407343 ARSIQ5FYB1 569 aa14.12□□□□□ -0.15
PTPN12-202ENST00000407343 PCDHGA10Q9Y5H3 936 aa14.12□□□□□ -0.15
PTPN12-202ENST00000407343 PHF14O94880 888 aa14.11□□□□□ -0.15
PTPN12-202ENST00000407343 SLC24A3Q9HC58 644 aa14.11□□□□□ -0.15
PTPN12-202ENST00000407343 ZSWIM6Q9HCJ5 1215 aa14.11□□□□□ -0.15
PTPN12-202ENST00000407343 ZNF316A6NFI3 1004 aaPredicted RBP14.1□□□□□ -0.15
PTPN12-202ENST00000407343 NUDT7P0C024 238 aa14.09□□□□□ -0.15
PTPN12-202ENST00000407343 FOSBP53539 338 aa14.07□□□□□ -0.16
PTPN12-202ENST00000407343 EN1Q05925 392 aaPredicted RBP14.07□□□□□ -0.16
PTPN12-202ENST00000407343 LHX8Q68G74 356 aa14.07□□□□□ -0.16
PTPN12-202ENST00000407343 JPH4Q96JJ6 628 aa14.07□□□□□ -0.16
PTPN12-202ENST00000407343 EPAS1Q99814 870 aa14.06□□□□□ -0.16
PTPN12-202ENST00000407343 NUTM2FA1L443 756 aa14.04□□□□□ -0.16
PTPN12-202ENST00000407343 CDHR5Q9HBB8 845 aa14.04□□□□□ -0.16
PTPN12-202ENST00000407343 RIMBP2O15034 1052 aa14.03□□□□□ -0.16
PTPN12-202ENST00000407343 NPDC1Q9NQX5 325 aaPredicted RBP14.03□□□□□ -0.16
PTPN12-202ENST00000407343 PTGDRQ13258 359 aa14.02□□□□□ -0.17
PTPN12-202ENST00000407343 TYW1BQ6NUM6 668 aa14.01□□□□□ -0.17
PTPN12-202ENST00000407343 FECHP22830 423 aa14□□□□□ -0.17
PTPN12-202ENST00000407343 ZNF710Q8N1W2 664 aa14□□□□□ -0.17
PTPN12-202ENST00000407343 HOXB1P14653 301 aaPredicted RBP13.99□□□□□ -0.17
PTPN12-202ENST00000407343 TSR1Q2NL82 804 aaKnown RBP13.99□□□□□ -0.17
PTPN12-202ENST00000407343 FCHSD2O94868 740 aa13.98□□□□□ -0.17
PTPN12-202ENST00000407343 BRPF1P55201 1214 aaPredicted RBP13.98□□□□□ -0.17
PTPN12-202ENST00000407343 LHX6Q9UPM6 363 aa13.98□□□□□ -0.17
PTPN12-202ENST00000407343 SNPHO15079 494 aa13.97□□□□□ -0.17
PTPN12-202ENST00000407343 GNPATO15228 680 aa13.97□□□□□ -0.17
PTPN12-202ENST00000407343 HIC1Q14526 733 aa13.97□□□□□ -0.17
PTPN12-202ENST00000407343 FBXW7Q969H0 707 aa13.97□□□□□ -0.17
PTPN12-202ENST00000407343 RBM33Q96EV2 1170 aaKnown RBP13.97□□□□□ -0.17
PTPN12-202ENST00000407343 MAP3K7O43318 606 aa13.96□□□□□ -0.17
PTPN12-202ENST00000407343 ZNF454Q8N9F8 522 aa13.96□□□□□ -0.17
PTPN12-202ENST00000407343 AK7Q96M32 723 aa13.95□□□□□ -0.18
PTPN12-202ENST00000407343 ADAM33Q9BZ11 813 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms