RNA–Protein interactions for RNA: ENST00000407142.5

PPM1F-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PPM1F, Length 5,587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-203ENST00000407142 TOP2AP11388 1531 aaKnown RBP19.61■□□□□ 0.73
PPM1F-203ENST00000407142 HSP90AB1P08238 724 aaKnown RBP19.61■□□□□ 0.73
PPM1F-203ENST00000407142 PKD2Q13563 968 aa19.61■□□□□ 0.73
PPM1F-203ENST00000407142 SOX12O15370 315 aa19.61■□□□□ 0.73
PPM1F-203ENST00000407142 STK26Q9P289 416 aa19.61■□□□□ 0.73
PPM1F-203ENST00000407142 MORC1Q86VD1 984 aa19.61■□□□□ 0.73
PPM1F-203ENST00000407142 GOLGA6L6A8MZA4 724 aa19.6■□□□□ 0.73
PPM1F-203ENST00000407142 OS9Q13438 667 aaPredicted RBP19.6■□□□□ 0.73
PPM1F-203ENST00000407142 VPS8Q8N3P4 1428 aa19.6■□□□□ 0.73
PPM1F-203ENST00000407142 EID1Q9Y6B2 187 aa19.6■□□□□ 0.73
PPM1F-203ENST00000407142 L1TD1Q5T7N2 865 aaKnown RBP19.59■□□□□ 0.73
PPM1F-203ENST00000407142 SETD5Q9C0A6 1442 aa19.58■□□□□ 0.72
PPM1F-203ENST00000407142 GOLGA2Q08379 1002 aa19.58■□□□□ 0.72
PPM1F-203ENST00000407142 RSPH4AQ5TD94 716 aa19.57■□□□□ 0.72
PPM1F-203ENST00000407142 ABCC8Q09428 1581 aa19.57■□□□□ 0.72
PPM1F-203ENST00000407142 B4GALNT3Q6L9W6 998 aa19.57■□□□□ 0.72
PPM1F-203ENST00000407142 RTF1Q92541 710 aaKnown RBP19.55■□□□□ 0.72
PPM1F-203ENST00000407142 KIF3BO15066 747 aa19.55■□□□□ 0.72
PPM1F-203ENST00000407142 PAK3O75914 559 aaPredicted RBP19.54■□□□□ 0.72
PPM1F-203ENST00000407142 SPAG9O60271 1321 aaKnown RBP19.54■□□□□ 0.72
PPM1F-203ENST00000407142 NUP155O75694 1391 aa19.54■□□□□ 0.72
PPM1F-203ENST00000407142 CHAF1AQ13111 956 aaPredicted RBP19.54■□□□□ 0.72
PPM1F-203ENST00000407142 MSNP26038 577 aaKnown RBP19.54■□□□□ 0.72
PPM1F-203ENST00000407142 RAPGEF2Q9Y4G8 1499 aa19.54■□□□□ 0.72
PPM1F-203ENST00000407142 CSB-PGBD3P0DP91 1061 aa19.53■□□□□ 0.72
PPM1F-203ENST00000407142 NRDCO43847 1150 aa19.53■□□□□ 0.72
PPM1F-203ENST00000407142 FRAT1Q92837 279 aaPredicted RBP19.53■□□□□ 0.72
PPM1F-203ENST00000407142 JPH4Q96JJ6 628 aa19.53■□□□□ 0.72
PPM1F-203ENST00000407142 EIF3AQ14152 1382 aaKnown RBP19.51■□□□□ 0.71
PPM1F-203ENST00000407142 HSCBQ8IWL3 235 aa19.51■□□□□ 0.71
PPM1F-203ENST00000407142 CCDC18Q5T9S5 1454 aa19.5■□□□□ 0.71
PPM1F-203ENST00000407142 WASHC2CQ9Y4E1 1318 aa19.5■□□□□ 0.71
PPM1F-203ENST00000407142 ATAD2BQ9ULI0 1458 aa19.49■□□□□ 0.71
PPM1F-203ENST00000407142 RBM19Q9Y4C8 960 aaKnown RBP19.49■□□□□ 0.71
PPM1F-203ENST00000407142 OSCARQ8IYS5 282 aa19.47■□□□□ 0.71
PPM1F-203ENST00000407142 HNRNPMP52272 730 aaKnown RBP eCLIP19.46■□□□□ 0.712e-6■□□□□ 8.9
PPM1F-203ENST00000407142 ROCK2O75116 1388 aaKnown RBP19.46■□□□□ 0.7
PPM1F-203ENST00000407142 FANCD2Q9BXW9 1451 aa19.44■□□□□ 0.7
PPM1F-203ENST00000407142 CFAP44Q96MT7 982 aa19.44■□□□□ 0.7
PPM1F-203ENST00000407142 CALD1Q05682 793 aaKnown RBP19.43■□□□□ 0.7
PPM1F-203ENST00000407142 MPHOSPH9Q99550 1183 aa19.43■□□□□ 0.7
PPM1F-203ENST00000407142 CCDC9Q9Y3X0 531 aaKnown RBP19.43■□□□□ 0.7
PPM1F-203ENST00000407142 KTN1Q86UP2 1357 aaKnown RBP19.43■□□□□ 0.7
PPM1F-203ENST00000407142 FGD1P98174 961 aa19.43■□□□□ 0.7
PPM1F-203ENST00000407142 CHMP4AQ9BY43 222 aa19.42■□□□□ 0.7
PPM1F-203ENST00000407142 WIZO95785 1651 aa19.42■□□□□ 0.7
PPM1F-203ENST00000407142 KCNJ4P48050 445 aa19.42■□□□□ 0.7
PPM1F-203ENST00000407142 GOLGA6L4A6NEF3 574 aa19.41■□□□□ 0.7
PPM1F-203ENST00000407142 KANK4Q5T7N3 995 aaPredicted RBP19.41■□□□□ 0.7
PPM1F-203ENST00000407142 FHOD3Q2V2M9 1422 aa19.41■□□□□ 0.7
PPM1F-203ENST00000407142 TERF2IPQ9NYB0 399 aa19.4■□□□□ 0.7
PPM1F-203ENST00000407142 PTPRGP23470 1445 aa19.4■□□□□ 0.7
PPM1F-203ENST00000407142 HSPA5P11021 654 aaKnown RBP19.39■□□□□ 0.69
PPM1F-203ENST00000407142 CYB5RLQ6IPT4 315 aa19.39■□□□□ 0.69
PPM1F-203ENST00000407142 FOXD1Q16676 465 aa19.38■□□□□ 0.69
PPM1F-203ENST00000407142 TULP1O00294 542 aaPredicted RBP19.38■□□□□ 0.69
PPM1F-203ENST00000407142 AMER1Q5JTC6 1135 aaPredicted RBP19.38■□□□□ 0.69
PPM1F-203ENST00000407142 TMX4Q9H1E5 349 aaPredicted RBP19.37■□□□□ 0.69
PPM1F-203ENST00000407142 SPRYD3Q8NCJ5 442 aa19.37■□□□□ 0.69
PPM1F-203ENST00000407142 TAOK2Q9UL54 1235 aa19.37■□□□□ 0.69
PPM1F-203ENST00000407142 NGDNQ8NEJ9 315 aaKnown RBP19.37■□□□□ 0.69
PPM1F-203ENST00000407142 SMARCA4P51532 1647 aa19.36■□□□□ 0.69
PPM1F-203ENST00000407142 DRC7Q8IY82 874 aa19.36■□□□□ 0.69
PPM1F-203ENST00000407142 CCER2I3L3R5 266 aa19.35■□□□□ 0.69
PPM1F-203ENST00000407142 IPO8O15397 1037 aaKnown RBP19.33■□□□□ 0.69
PPM1F-203ENST00000407142 U2AF1L5P0DN76 240 aaPredicted RBP19.33■□□□□ 0.68
PPM1F-203ENST00000407142 U2AF1Q01081 240 aaKnown RBP eCLIP19.33■□□□□ 0.68
PPM1F-203ENST00000407142 NAP1L2Q9ULW6 460 aaPredicted RBP19.33■□□□□ 0.68
PPM1F-203ENST00000407142 MCCP23508 829 aa19.33■□□□□ 0.68
PPM1F-203ENST00000407142 PTMSP20962 102 aa19.32■□□□□ 0.68
PPM1F-203ENST00000407142 ZNF330Q9Y3S2 320 aaPredicted RBP19.31■□□□□ 0.68
PPM1F-203ENST00000407142 RAB3GAP2Q9H2M9 1393 aa19.3■□□□□ 0.68
PPM1F-203ENST00000407142 RALBP1Q15311 655 aa19.3■□□□□ 0.68
PPM1F-203ENST00000407142 GBP4Q96PP9 640 aa19.29■□□□□ 0.68
PPM1F-203ENST00000407142 UACAQ9BZF9 1416 aa19.29■□□□□ 0.68
PPM1F-203ENST00000407142 NUTM2DQ5VT03 806 aaPredicted RBP19.27■□□□□ 0.68
PPM1F-203ENST00000407142 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.27■□□□□ 0.68
PPM1F-203ENST00000407142 KIAA2012Q0VF49 1180 aa19.27■□□□□ 0.68
PPM1F-203ENST00000407142 AMPHP49418 695 aa19.26■□□□□ 0.67
PPM1F-203ENST00000407142 STK31Q9BXU1 1019 aa19.25■□□□□ 0.67
PPM1F-203ENST00000407142 HDAC5Q9UQL6 1122 aa19.25■□□□□ 0.67
PPM1F-203ENST00000407142 ISY1Q9ULR0 285 aaKnown RBP19.24■□□□□ 0.67
PPM1F-203ENST00000407142 AEBP2Q6ZN18 517 aaPredicted RBP19.24■□□□□ 0.67
PPM1F-203ENST00000407142 GZF1Q9H116 711 aaPredicted RBP19.23■□□□□ 0.67
PPM1F-203ENST00000407142 TCERG1O14776 1098 aaKnown RBP19.22■□□□□ 0.67
PPM1F-203ENST00000407142 ARID3AQ99856 593 aa19.22■□□□□ 0.67
PPM1F-203ENST00000407142 VGFO15240 615 aaPredicted RBP19.22■□□□□ 0.67
PPM1F-203ENST00000407142 LMOD3Q0VAK6 560 aa19.21■□□□□ 0.67
PPM1F-203ENST00000407142 GAPVD1Q14C86 1478 aa19.2■□□□□ 0.66
PPM1F-203ENST00000407142 CCDC144AA2RUR9 1427 aa19.2■□□□□ 0.66
PPM1F-203ENST00000407142 TSHZ2Q9NRE2 1034 aa19.2■□□□□ 0.66
PPM1F-203ENST00000407142 SLKQ9H2G2 1235 aaPredicted RBP19.19■□□□□ 0.66
PPM1F-203ENST00000407142 GOLGA6L3A6NEY3 463 aa19.19■□□□□ 0.66
PPM1F-203ENST00000407142 FAM69CQ0P6D2 419 aa19.18■□□□□ 0.66
PPM1F-203ENST00000407142 TAF7LQ5H9L4 462 aa19.17■□□□□ 0.66
PPM1F-203ENST00000407142 TRAK1Q9UPV9 953 aa19.17■□□□□ 0.66
PPM1F-203ENST00000407142 KIAA1211Q6ZU35 1233 aa19.16■□□□□ 0.66
PPM1F-203ENST00000407142 IPO9Q96P70 1041 aaKnown RBP19.16■□□□□ 0.66
PPM1F-203ENST00000407142 TNNT3P45378 269 aaPredicted RBP19.16■□□□□ 0.66
PPM1F-203ENST00000407142 NUTM2FA1L443 756 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms