RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.04■■□□□ 1.12
LIMK2-204ENST00000406516 EHBP1L1Q8N3D4 1523 aa22.04■■□□□ 1.12
LIMK2-204ENST00000406516 KIF13AQ9H1H9 1805 aa22.03■■□□□ 1.12
LIMK2-204ENST00000406516 GLI2P10070 1586 aa22.02■■□□□ 1.12
LIMK2-204ENST00000406516 FAM50AQ14320 339 aaKnown RBP22.02■■□□□ 1.12
LIMK2-204ENST00000406516 CD109Q6YHK3 1445 aa22.01■■□□□ 1.11
LIMK2-204ENST00000406516 TTC37Q6PGP7 1564 aa22■■□□□ 1.11
LIMK2-204ENST00000406516 SETD5Q9C0A6 1442 aa21.99■■□□□ 1.11
LIMK2-204ENST00000406516 ABCA9Q8IUA7 1624 aa21.98■■□□□ 1.11
LIMK2-204ENST00000406516 NCOA2Q15596 1464 aa21.98■■□□□ 1.11
LIMK2-204ENST00000406516 MAP3K4Q9Y6R4 1608 aa21.95■■□□□ 1.1
LIMK2-204ENST00000406516 SUPT6HQ7KZ85 1726 aaKnown RBP21.93■■□□□ 1.1
LIMK2-204ENST00000406516 GPATCH8Q9UKJ3 1502 aaKnown RBP21.93■■□□□ 1.1
LIMK2-204ENST00000406516 PLCH2O75038 1416 aa21.92■■□□□ 1.1
LIMK2-204ENST00000406516 TSPOAP1O95153 1857 aa21.92■■□□□ 1.1
LIMK2-204ENST00000406516 CFDP1Q9UEE9 299 aaPredicted RBP21.89■■□□□ 1.09
LIMK2-204ENST00000406516 ZNF777Q9ULD5 760 aaPredicted RBP21.88■■□□□ 1.09
LIMK2-204ENST00000406516 PPRC1Q5VV67 1664 aaKnown RBP21.87■■□□□ 1.09
LIMK2-204ENST00000406516 EFCAB2Q5VUJ9 269 aa21.86■■□□□ 1.09
LIMK2-204ENST00000406516 SIN3AQ96ST3 1273 aa21.86■■□□□ 1.09
LIMK2-204ENST00000406516 ZNF644Q9H582 1327 aaPredicted RBP21.85■■□□□ 1.09
LIMK2-204ENST00000406516 CDC42BPAQ5VT25 1732 aa21.85■■□□□ 1.09
LIMK2-204ENST00000406516 ARHGAP5Q13017 1502 aa21.85■■□□□ 1.09
LIMK2-204ENST00000406516 FANCAO15360 1455 aa21.84■■□□□ 1.09
LIMK2-204ENST00000406516 MYO5CQ9NQX4 1742 aa21.84■■□□□ 1.09
LIMK2-204ENST00000406516 MYOM3Q5VTT5 1437 aa21.83■■□□□ 1.09
LIMK2-204ENST00000406516 CDC42BPBQ9Y5S2 1711 aa21.83■■□□□ 1.08
LIMK2-204ENST00000406516 PREX2Q70Z35 1606 aa21.82■■□□□ 1.08
LIMK2-204ENST00000406516 TEX14Q8IWB6 1497 aa21.81■■□□□ 1.08
LIMK2-204ENST00000406516 AKNAQ7Z591 1439 aa21.8■■□□□ 1.08
LIMK2-204ENST00000406516 ARAP3Q8WWN8 1544 aa21.79■■□□□ 1.08
LIMK2-204ENST00000406516 NEO1Q92859 1461 aa21.77■■□□□ 1.08
LIMK2-204ENST00000406516 COL17A1Q9UMD9 1497 aaPredicted RBP21.76■■□□□ 1.07
LIMK2-204ENST00000406516 HNRNPMP52272 730 aaKnown RBP eCLIP21.76■■□□□ 1.071e-7■■■□□ 16.7
LIMK2-204ENST00000406516 FGD6Q6ZV73 1430 aa21.76■■□□□ 1.07
LIMK2-204ENST00000406516 ITSN2Q9NZM3 1697 aa21.75■■□□□ 1.07
LIMK2-204ENST00000406516 MIA2Q96PC5 1412 aa21.75■■□□□ 1.07
LIMK2-204ENST00000406516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.75■■□□□ 1.07
LIMK2-204ENST00000406516 RAPGEF3O95398 923 aa21.74■■□□□ 1.07
LIMK2-204ENST00000406516 SCAPERQ9BY12 1400 aa21.74■■□□□ 1.07
LIMK2-204ENST00000406516 SAMD9LQ8IVG5 1584 aa21.73■■□□□ 1.07
LIMK2-204ENST00000406516 ADGRL1O94910 1474 aa21.73■■□□□ 1.07
LIMK2-204ENST00000406516 ARHGEF12Q9NZN5 1544 aa21.73■■□□□ 1.07
LIMK2-204ENST00000406516 AFAP1Q8N556 730 aa21.71■■□□□ 1.07
LIMK2-204ENST00000406516 CAMSAP2Q08AD1 1489 aa21.7■■□□□ 1.07
LIMK2-204ENST00000406516 CFAP74Q9C0B2 1584 aa21.69■■□□□ 1.06
LIMK2-204ENST00000406516 ABCC1P33527 1531 aa21.68■■□□□ 1.06
LIMK2-204ENST00000406516 DDX10Q13206 875 aaKnown RBP21.68■■□□□ 1.06
LIMK2-204ENST00000406516 TRAPPC8Q9Y2L5 1435 aa21.68■■□□□ 1.06
LIMK2-204ENST00000406516 PTPN23Q9H3S7 1636 aa21.67■■□□□ 1.06
LIMK2-204ENST00000406516 SYCP2Q9BX26 1530 aa21.67■■□□□ 1.06
LIMK2-204ENST00000406516 KIAA1107Q9UPP5 1409 aa21.67■■□□□ 1.06
LIMK2-204ENST00000406516 DENND4BO75064 1496 aaPredicted RBP21.67■■□□□ 1.06
LIMK2-204ENST00000406516 MBD5Q9P267 1494 aa21.66■■□□□ 1.06
LIMK2-204ENST00000406516 TIMELESSQ9UNS1 1208 aa21.66■■□□□ 1.06
LIMK2-204ENST00000406516 TCOF1Q13428 1488 aaKnown RBP21.65■■□□□ 1.06
LIMK2-204ENST00000406516 PTPRKQ15262 1439 aa21.64■■□□□ 1.06
LIMK2-204ENST00000406516 PLEKHH2Q8IVE3 1493 aa21.64■■□□□ 1.06
LIMK2-204ENST00000406516 HIRIP3Q9BW71 556 aaPredicted RBP21.64■■□□□ 1.05
LIMK2-204ENST00000406516 SUPT16HQ9Y5B9 1047 aaKnown RBP21.63■■□□□ 1.05
LIMK2-204ENST00000406516 KDM6BO15054 1643 aa21.63■■□□□ 1.05
LIMK2-204ENST00000406516 PPP1R15AO75807 674 aaPredicted RBP21.63■■□□□ 1.05
LIMK2-204ENST00000406516 POGZQ7Z3K3 1410 aa21.62■■□□□ 1.05
LIMK2-204ENST00000406516 HFM1A2PYH4 1435 aa21.6■■□□□ 1.05
LIMK2-204ENST00000406516 FRMPD1Q5SYB0 1578 aa21.58■■□□□ 1.05
LIMK2-204ENST00000406516 ZNF518AQ6AHZ1 1483 aa21.58■■□□□ 1.05
LIMK2-204ENST00000406516 RSPH4AQ5TD94 716 aa21.58■■□□□ 1.04
LIMK2-204ENST00000406516 TONSLQ96HA7 1378 aa21.58■■□□□ 1.04
LIMK2-204ENST00000406516 ABCC5O15440 1437 aa21.57■■□□□ 1.04
LIMK2-204ENST00000406516 MYT1LQ9UL68 1186 aa21.57■■□□□ 1.04
LIMK2-204ENST00000406516 RICTORQ6R327 1708 aa21.56■■□□□ 1.04
LIMK2-204ENST00000406516 TSPY4P0CV99 314 aa21.56■■□□□ 1.04
LIMK2-204ENST00000406516 TSPY10P0CW01 314 aa21.56■■□□□ 1.04
LIMK2-204ENST00000406516 CCDC141Q6ZP82 1450 aa21.56■■□□□ 1.04
LIMK2-204ENST00000406516 CHIC2Q9UKJ5 165 aa21.55■■□□□ 1.04
LIMK2-204ENST00000406516 SPAG9O60271 1321 aaKnown RBP21.55■■□□□ 1.04
LIMK2-204ENST00000406516 DAPK1P53355 1430 aa21.54■■□□□ 1.04
LIMK2-204ENST00000406516 NAIPQ13075 1403 aa21.54■■□□□ 1.04
LIMK2-204ENST00000406516 ARHGEF5Q12774 1597 aa21.53■■□□□ 1.04
LIMK2-204ENST00000406516 KDM5CP41229 1560 aa21.52■■□□□ 1.04
LIMK2-204ENST00000406516 YEATS2Q9ULM3 1422 aa21.51■■□□□ 1.03
LIMK2-204ENST00000406516 DNMT1P26358 1616 aaKnown RBP21.5■■□□□ 1.03
LIMK2-204ENST00000406516 MLH3Q9UHC1 1453 aa21.49■■□□□ 1.03
LIMK2-204ENST00000406516 C9orf84Q5VXU9 1444 aa21.48■■□□□ 1.03
LIMK2-204ENST00000406516 ZMYM4Q5VZL5 1548 aa21.48■■□□□ 1.03
LIMK2-204ENST00000406516 RRP7BPQ9NSQ0 103 aa21.46■■□□□ 1.03
LIMK2-204ENST00000406516 RTEL1-TNFRSF6BF6WH68 1400 aa21.45■■□□□ 1.02
LIMK2-204ENST00000406516 HECW2Q9P2P5 1572 aa21.45■■□□□ 1.02
LIMK2-204ENST00000406516 MAGI2Q86UL8 1455 aa21.45■■□□□ 1.02
LIMK2-204ENST00000406516 ATP7AQ04656 1500 aa21.44■■□□□ 1.02
LIMK2-204ENST00000406516 KIDINS220Q9ULH0 1771 aa21.44■■□□□ 1.02
LIMK2-204ENST00000406516 ZFYVE16Q7Z3T8 1539 aa21.44■■□□□ 1.02
LIMK2-204ENST00000406516 ANP32CO43423 234 aa21.43■■□□□ 1.02
LIMK2-204ENST00000406516 SHANK2Q9UPX8 1470 aa21.42■■□□□ 1.02
LIMK2-204ENST00000406516 INO80Q9ULG1 1556 aaPredicted RBP21.42■■□□□ 1.02
LIMK2-204ENST00000406516 CROCC2H7BZ55 1655 aa21.41■■□□□ 1.02
LIMK2-204ENST00000406516 NCOA1Q15788 1441 aa21.4■■□□□ 1.02
LIMK2-204ENST00000406516 MAST1Q9Y2H9 1570 aa21.4■■□□□ 1.02
LIMK2-204ENST00000406516 ANKRD30AQ9BXX3 1397 aa21.39■■□□□ 1.01
LIMK2-204ENST00000406516 ABCA6Q8N139 1617 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms