RNA–Protein interactions for RNA: ENST00000405025.5

HDAC11-206, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-206ENST00000405025 SCAPERQ9BY12 1400 aa42.17■■■■■ 4.34
HDAC11-206ENST00000405025 PREX2Q70Z35 1606 aa42.16■■■■■ 4.34
HDAC11-206ENST00000405025 ZMYM4Q5VZL5 1548 aa42.14■■■■■ 4.34
HDAC11-206ENST00000405025 POGZQ7Z3K3 1410 aa42.13■■■■■ 4.34
HDAC11-206ENST00000405025 ARHGEF40Q8TER5 1519 aa42.13■■■■■ 4.33
HDAC11-206ENST00000405025 CDC42BPAQ5VT25 1732 aa42.11■■■■■ 4.33
HDAC11-206ENST00000405025 YEATS2Q9ULM3 1422 aa42.03■■■■■ 4.32
HDAC11-206ENST00000405025 MTUS2Q5JR59 1369 aa42.02■■■■■ 4.32
HDAC11-206ENST00000405025 ZFYVE16Q7Z3T8 1539 aa42.02■■■■■ 4.32
HDAC11-206ENST00000405025 VPS8Q8N3P4 1428 aa41.99■■■■■ 4.31
HDAC11-206ENST00000405025 GPATCH8Q9UKJ3 1502 aaKnown RBP41.97■■■■■ 4.31
HDAC11-206ENST00000405025 MAGI2Q86UL8 1455 aa41.97■■■■■ 4.31
HDAC11-206ENST00000405025 ABCC1P33527 1531 aa41.96■■■■■ 4.31
HDAC11-206ENST00000405025 EHBP1L1Q8N3D4 1523 aa41.96■■■■■ 4.31
HDAC11-206ENST00000405025 ARHGEF12Q9NZN5 1544 aa41.94■■■■■ 4.3
HDAC11-206ENST00000405025 ZNF518AQ6AHZ1 1483 aa41.93■■■■■ 4.3
HDAC11-206ENST00000405025 SIGLEC1Q9BZZ2 1709 aa41.92■■■■■ 4.3
HDAC11-206ENST00000405025 KDM5CP41229 1560 aa41.92■■■■■ 4.3
HDAC11-206ENST00000405025 ITSN2Q9NZM3 1697 aa41.91■■■■■ 4.3
HDAC11-206ENST00000405025 AFAP1Q8N556 730 aa41.9■■■■■ 4.3
HDAC11-206ENST00000405025 ADAMTSL3P82987 1691 aa41.9■■■■■ 4.3
HDAC11-206ENST00000405025 BCORL1Q5H9F3 1711 aa41.89■■■■■ 4.3
HDAC11-206ENST00000405025 TIAM1Q13009 1591 aa41.88■■■■■ 4.3
HDAC11-206ENST00000405025 SAMD9LQ8IVG5 1584 aa41.88■■■■■ 4.3
HDAC11-206ENST00000405025 ARID4BQ4LE39 1312 aaPredicted RBP41.88■■■■■ 4.29
HDAC11-206ENST00000405025 TRAPPC8Q9Y2L5 1435 aa41.86■■■■■ 4.29
HDAC11-206ENST00000405025 CCNB3Q8WWL7 1395 aa41.86■■■■■ 4.29
HDAC11-206ENST00000405025 ZNF777Q9ULD5 760 aaPredicted RBP41.83■■■■■ 4.29
HDAC11-206ENST00000405025 HECW2Q9P2P5 1572 aa41.81■■■■■ 4.28
HDAC11-206ENST00000405025 SYCP2Q9BX26 1530 aa41.78■■■■■ 4.28
HDAC11-206ENST00000405025 ATP10AO60312 1499 aa41.77■■■■■ 4.28
HDAC11-206ENST00000405025 MADDQ8WXG6 1647 aa41.77■■■■■ 4.28
HDAC11-206ENST00000405025 CFDP1Q9UEE9 299 aaPredicted RBP41.76■■■■■ 4.28
HDAC11-206ENST00000405025 SUPT6HQ7KZ85 1726 aaKnown RBP41.74■■■■■ 4.27
HDAC11-206ENST00000405025 C9orf84Q5VXU9 1444 aa41.73■■■■■ 4.27
HDAC11-206ENST00000405025 MLH3Q9UHC1 1453 aa41.72■■■■■ 4.27
HDAC11-206ENST00000405025 DIP2CQ9Y2E4 1556 aa41.72■■■■■ 4.27
HDAC11-206ENST00000405025 ABCA6Q8N139 1617 aa41.72■■■■■ 4.27
HDAC11-206ENST00000405025 NCOA2Q15596 1464 aa41.72■■■■■ 4.27
HDAC11-206ENST00000405025 LRRC9Q6ZRR7 1453 aa41.69■■■■■ 4.26
HDAC11-206ENST00000405025 PTPRMP28827 1452 aa41.68■■■■■ 4.26
HDAC11-206ENST00000405025 MYT1LQ9UL68 1186 aa41.68■■■■■ 4.26
HDAC11-206ENST00000405025 HNRNPMP52272 730 aaKnown RBP eCLIP41.67■■■■■ 4.26
HDAC11-206ENST00000405025 KIDINS220Q9ULH0 1771 aa41.65■■■■■ 4.26
HDAC11-206ENST00000405025 KIAA1107Q9UPP5 1409 aa41.65■■■■■ 4.26
HDAC11-206ENST00000405025 PLEKHH2Q8IVE3 1493 aa41.65■■■■■ 4.26
HDAC11-206ENST00000405025 MAP3K1Q13233 1512 aa41.64■■■■■ 4.26
HDAC11-206ENST00000405025 RIMS1Q86UR5 1692 aaKnown RBP41.64■■■■■ 4.26
HDAC11-206ENST00000405025 ZNF644Q9H582 1327 aaPredicted RBP41.63■■■■■ 4.25
HDAC11-206ENST00000405025 MLECQ14165 292 aa41.6■■■■■ 4.25
HDAC11-206ENST00000405025 KANK4Q5T7N3 995 aaPredicted RBP41.6■■■■■ 4.25
HDAC11-206ENST00000405025 REREQ9P2R6 1566 aa41.58■■■■■ 4.25
HDAC11-206ENST00000405025 FER1L4A9Z1Z3 1794 aa41.53■■■■■ 4.24
HDAC11-206ENST00000405025 INO80Q9ULG1 1556 aaPredicted RBP41.51■■■■■ 4.24
HDAC11-206ENST00000405025 SPAG9O60271 1321 aaKnown RBP41.51■■■■■ 4.24
HDAC11-206ENST00000405025 MBD5Q9P267 1494 aa41.51■■■■■ 4.24
HDAC11-206ENST00000405025 ATP7AQ04656 1500 aa41.49■■■■■ 4.23
HDAC11-206ENST00000405025 CAMSAP2Q08AD1 1489 aa41.47■■■■■ 4.23
HDAC11-206ENST00000405025 AGLP35573 1532 aa41.44■■■■■ 4.22
HDAC11-206ENST00000405025 PLPPR3Q6T4P5 718 aa41.37■■■■■ 4.21
HDAC11-206ENST00000405025 APLP2Q06481 763 aa41.36■■■■■ 4.21
HDAC11-206ENST00000405025 CCDC141Q6ZP82 1450 aa41.33■■■■■ 4.21
HDAC11-206ENST00000405025 MYOM3Q5VTT5 1437 aa41.32■■■■■ 4.21
HDAC11-206ENST00000405025 PLXNC1O60486 1568 aa41.32■■■■■ 4.2
HDAC11-206ENST00000405025 A2MP01023 1474 aa41.29■■■■■ 4.2
HDAC11-206ENST00000405025 ARHGEF5Q12774 1597 aa41.28■■■■■ 4.2
HDAC11-206ENST00000405025 ADGBQ8N7X0 1667 aa41.27■■■■■ 4.2
HDAC11-206ENST00000405025 RTEL1-TNFRSF6BF6WH68 1400 aa41.26■■■■■ 4.19
HDAC11-206ENST00000405025 MIA2Q96PC5 1412 aa41.23■■■■■ 4.19
HDAC11-206ENST00000405025 LMTK3Q96Q04 1460 aa41.21■■■■■ 4.19
HDAC11-206ENST00000405025 CEBPAP49715 358 aaPredicted RBP41.2■■■■■ 4.19
HDAC11-206ENST00000405025 RSPH4AQ5TD94 716 aa41.18■■■■■ 4.18
HDAC11-206ENST00000405025 C3P01024 1663 aa41.13■■■■■ 4.18
HDAC11-206ENST00000405025 PTPN23Q9H3S7 1636 aa41.1■■■■■ 4.17
HDAC11-206ENST00000405025 DHX29Q7Z478 1369 aaKnown RBP41.08■■■■■ 4.17
HDAC11-206ENST00000405025 MAST1Q9Y2H9 1570 aa41.08■■■■■ 4.17
HDAC11-206ENST00000405025 ESF1Q9H501 851 aaKnown RBP41.07■■■■■ 4.17
HDAC11-206ENST00000405025 CNTLNQ9NXG0 1405 aa41.06■■■■■ 4.16
HDAC11-206ENST00000405025 TSPY4P0CV99 314 aa41.05■■■■■ 4.16
HDAC11-206ENST00000405025 TSPY10P0CW01 314 aa41.05■■■■■ 4.16
HDAC11-206ENST00000405025 FGD6Q6ZV73 1430 aa41.04■■■■■ 4.16
HDAC11-206ENST00000405025 MROH2AA6NES4 1674 aa41.02■■■■■ 4.16
HDAC11-206ENST00000405025 CLTCQ00610 1675 aaKnown RBP41.02■■■■■ 4.16
HDAC11-206ENST00000405025 PREX1Q8TCU6 1659 aa41.02■■■■■ 4.16
HDAC11-206ENST00000405025 GGT6Q6P531 493 aa41.02■■■■■ 4.16
HDAC11-206ENST00000405025 HSPA2P54652 639 aa40.99■■■■■ 4.15
HDAC11-206ENST00000405025 TCOF1Q13428 1488 aaKnown RBP40.98■■■■■ 4.15
HDAC11-206ENST00000405025 CROCC2H7BZ55 1655 aa40.97■■■■■ 4.15
HDAC11-206ENST00000405025 ABCC5O15440 1437 aa40.94■■■■■ 4.14
HDAC11-206ENST00000405025 ZMYM3Q14202 1370 aa40.92■■■■■ 4.14
HDAC11-206ENST00000405025 KIF3BO15066 747 aa40.92■■■■■ 4.14
HDAC11-206ENST00000405025 DNMT1P26358 1616 aaKnown RBP40.9■■■■■ 4.14
HDAC11-206ENST00000405025 SETD1BQ9UPS6 1966 aaKnown RBP40.9■■■■■ 4.14
HDAC11-206ENST00000405025 DAPK1P53355 1430 aa40.88■■■■■ 4.13
HDAC11-206ENST00000405025 SHANK2Q9UPX8 1470 aa40.88■■■■■ 4.13
HDAC11-206ENST00000405025 UHRF1BP1Q6BDS2 1440 aa40.86■■■■■ 4.13
HDAC11-206ENST00000405025 PPP6R1Q9UPN7 881 aa40.84■■■■■ 4.13
HDAC11-206ENST00000405025 NPATQ14207 1427 aa40.8■■■■■ 4.12
HDAC11-206ENST00000405025 RNF17Q9BXT8 1623 aaKnown RBP40.78■■■■■ 4.12
HDAC11-206ENST00000405025 EIF2AK4Q9P2K8 1649 aaKnown RBP40.78■■■■■ 4.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms