RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 FRAT1Q92837 279 aaPredicted RBP23.04■■□□□ 1.28
SNED1-204ENST00000401884 EFCAB2Q5VUJ9 269 aa23.03■■□□□ 1.28
SNED1-204ENST00000401884 PPM1GO15355 546 aaPredicted RBP23.03■■□□□ 1.28
SNED1-204ENST00000401884 ARXQ96QS3 562 aa23.02■■□□□ 1.28
SNED1-204ENST00000401884 RCAN3Q9UKA8 241 aa23.02■■□□□ 1.28
SNED1-204ENST00000401884 NUDCQ9Y266 331 aa23.02■■□□□ 1.28
SNED1-204ENST00000401884 BECN1Q14457 450 aa23.01■■□□□ 1.27
SNED1-204ENST00000401884 ST20-MTHFSA0A0A6YYL1 179 aa23.01■■□□□ 1.27
SNED1-204ENST00000401884 EIF5BO60841 1220 aaKnown RBP23■■□□□ 1.27
SNED1-204ENST00000401884 LAS1LQ9Y4W2 734 aaKnown RBP23■■□□□ 1.27
SNED1-204ENST00000401884 KANK1Q14678 1352 aa23■■□□□ 1.27
SNED1-204ENST00000401884 MYOM3Q5VTT5 1437 aa22.99■■□□□ 1.27
SNED1-204ENST00000401884 RSPH4AQ5TD94 716 aa22.99■■□□□ 1.27
SNED1-204ENST00000401884 UACAQ9BZF9 1416 aa22.98■■□□□ 1.27
SNED1-204ENST00000401884 FTSJ3Q8IY81 847 aaKnown RBP22.98■■□□□ 1.27
SNED1-204ENST00000401884 TOP2BQ02880 1626 aa22.98■■□□□ 1.27
SNED1-204ENST00000401884 NLRP13Q86W25 1043 aa22.98■■□□□ 1.27
SNED1-204ENST00000401884 ANP32BQ92688 251 aaKnown RBP22.97■■□□□ 1.27
SNED1-204ENST00000401884 MYH16Q9H6N6 1097 aa22.97■■□□□ 1.27
SNED1-204ENST00000401884 CASKIN1Q8WXD9 1431 aa22.96■■□□□ 1.27
SNED1-204ENST00000401884 POGKQ9P215 609 aa22.96■■□□□ 1.27
SNED1-204ENST00000401884 ZNF644Q9H582 1327 aaPredicted RBP22.96■■□□□ 1.27
SNED1-204ENST00000401884 MAPK8IP3Q9UPT6 1336 aa22.95■■□□□ 1.26
SNED1-204ENST00000401884 CUX1P39880 1505 aa22.93■■□□□ 1.26
SNED1-204ENST00000401884 U2SURPO15042 1029 aaKnown RBP22.93■■□□□ 1.26
SNED1-204ENST00000401884 GGT6Q6P531 493 aa22.93■■□□□ 1.26
SNED1-204ENST00000401884 MORC1Q86VD1 984 aa22.91■■□□□ 1.26
SNED1-204ENST00000401884 USP47Q96K76 1375 aa22.88■■□□□ 1.25
SNED1-204ENST00000401884 NCOA2Q15596 1464 aa22.88■■□□□ 1.25
SNED1-204ENST00000401884 ZBED9Q6R2W3 1325 aa22.87■■□□□ 1.25
SNED1-204ENST00000401884 KIF3BO15066 747 aa22.87■■□□□ 1.25
SNED1-204ENST00000401884 SAFB2Q14151 953 aaKnown RBP eCLIP22.87■■□□□ 1.25
SNED1-204ENST00000401884 KIF15Q9NS87 1388 aa22.84■■□□□ 1.25
SNED1-204ENST00000401884 PDE3BQ13370 1112 aa22.84■■□□□ 1.25
SNED1-204ENST00000401884 WASHC2AQ641Q2 1341 aa22.83■■□□□ 1.24
SNED1-204ENST00000401884 SRPK2P78362 688 aaKnown RBP22.83■■□□□ 1.24
SNED1-204ENST00000401884 MYBBP1AQ9BQG0 1328 aaKnown RBP22.82■■□□□ 1.24
SNED1-204ENST00000401884 AQRO60306 1485 aaKnown RBP eCLIP22.82■■□□□ 1.24
SNED1-204ENST00000401884 FYCO1Q9BQS8 1478 aa22.82■■□□□ 1.24
SNED1-204ENST00000401884 SPAG9O60271 1321 aaKnown RBP22.82■■□□□ 1.24
SNED1-204ENST00000401884 TCERG1O14776 1098 aaKnown RBP22.82■■□□□ 1.24
SNED1-204ENST00000401884 CCDC144AA2RUR9 1427 aa22.81■■□□□ 1.24
SNED1-204ENST00000401884 CCDC7Q96M83 1385 aa22.81■■□□□ 1.24
SNED1-204ENST00000401884 KIF7Q2M1P5 1343 aa22.81■■□□□ 1.24
SNED1-204ENST00000401884 HMGXB3Q12766 1538 aa22.8■■□□□ 1.24
SNED1-204ENST00000401884 PANK3Q9H999 370 aa22.79■■□□□ 1.24
SNED1-204ENST00000401884 PTPRGP23470 1445 aa22.79■■□□□ 1.24
SNED1-204ENST00000401884 MS4A1P11836 297 aa22.78■■□□□ 1.24
SNED1-204ENST00000401884 BICRAQ9NZM4 1560 aa22.77■■□□□ 1.24
SNED1-204ENST00000401884 GOLGA2Q08379 1002 aa22.77■■□□□ 1.24
SNED1-204ENST00000401884 STK26Q9P289 416 aa22.76■■□□□ 1.23
SNED1-204ENST00000401884 NESP48681 1621 aa22.76■■□□□ 1.23
SNED1-204ENST00000401884 C14orf37Q86TY3 774 aa22.75■■□□□ 1.23
SNED1-204ENST00000401884 DEKP35659 375 aaKnown RBP22.75■■□□□ 1.23
SNED1-204ENST00000401884 TIAM1Q13009 1591 aa22.74■■□□□ 1.23
SNED1-204ENST00000401884 ARID4BQ4LE39 1312 aaPredicted RBP22.74■■□□□ 1.23
SNED1-204ENST00000401884 U2AF1L5P0DN76 240 aaPredicted RBP22.73■■□□□ 1.23
SNED1-204ENST00000401884 U2AF1Q01081 240 aaKnown RBP eCLIP22.73■■□□□ 1.23
SNED1-204ENST00000401884 PLEKHG5O94827 1062 aa22.72■■□□□ 1.23
SNED1-204ENST00000401884 POLA1P09884 1462 aaPredicted RBP22.72■■□□□ 1.23
SNED1-204ENST00000401884 CCDC146Q8IYE0 955 aa22.71■■□□□ 1.23
SNED1-204ENST00000401884 PNNQ9H307 717 aaKnown RBP22.71■■□□□ 1.23
SNED1-204ENST00000401884 CNTLNQ9NXG0 1405 aa22.69■■□□□ 1.22
SNED1-204ENST00000401884 TOPBP1Q92547 1522 aa22.69■■□□□ 1.22
SNED1-204ENST00000401884 IPO9Q96P70 1041 aaKnown RBP22.69■■□□□ 1.22
SNED1-204ENST00000401884 HFM1A2PYH4 1435 aa22.69■■□□□ 1.22
SNED1-204ENST00000401884 EIF3AQ14152 1382 aaKnown RBP22.68■■□□□ 1.22
SNED1-204ENST00000401884 ZBTB7CA1YPR0 619 aa22.68■■□□□ 1.22
SNED1-204ENST00000401884 EFCAB5A4FU69 1503 aa22.68■■□□□ 1.22
SNED1-204ENST00000401884 ANKRD50Q9ULJ7 1429 aa22.67■■□□□ 1.22
SNED1-204ENST00000401884 MLECQ14165 292 aa22.66■■□□□ 1.22
SNED1-204ENST00000401884 EXOC6Q8TAG9 804 aa22.65■■□□□ 1.22
SNED1-204ENST00000401884 CHMP4BQ9H444 224 aaKnown RBP22.65■■□□□ 1.22
SNED1-204ENST00000401884 GOLGA6L22H0YM25 854 aa22.65■■□□□ 1.22
SNED1-204ENST00000401884 PLIN1O60240 522 aa22.65■■□□□ 1.22
SNED1-204ENST00000401884 NBPF8Q3BBV2 869 aa22.64■■□□□ 1.22
SNED1-204ENST00000401884 RRP1P56182 461 aaKnown RBP22.64■■□□□ 1.21
SNED1-204ENST00000401884 TRAK1Q9UPV9 953 aa22.63■■□□□ 1.21
SNED1-204ENST00000401884 WDR97A6NE52 1622 aa22.62■■□□□ 1.21
SNED1-204ENST00000401884 RTN4Q9NQC3 1192 aaKnown RBP22.62■■□□□ 1.21
SNED1-204ENST00000401884 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.61■■□□□ 1.21
SNED1-204ENST00000401884 GRIN2BQ13224 1484 aa22.61■■□□□ 1.21
SNED1-204ENST00000401884 HDGFL2Q7Z4V5 671 aaPredicted RBP22.6■■□□□ 1.21
SNED1-204ENST00000401884 NUTM2DQ5VT03 806 aaPredicted RBP22.59■■□□□ 1.21
SNED1-204ENST00000401884 WASHC2CQ9Y4E1 1318 aa22.59■■□□□ 1.21
SNED1-204ENST00000401884 CLUAP1Q96AJ1 413 aa22.58■■□□□ 1.21
SNED1-204ENST00000401884 PEG3Q9GZU2 1588 aa22.58■■□□□ 1.2
SNED1-204ENST00000401884 TRIM44Q96DX7 344 aaPredicted RBP22.57■■□□□ 1.2
SNED1-204ENST00000401884 NAIPQ13075 1403 aa22.57■■□□□ 1.2
SNED1-204ENST00000401884 MIA2Q96PC5 1412 aa22.56■■□□□ 1.2
SNED1-204ENST00000401884 SOX12O15370 315 aa22.56■■□□□ 1.2
SNED1-204ENST00000401884 FANCIQ9NVI1 1328 aa22.56■■□□□ 1.2
SNED1-204ENST00000401884 CASC1Q6TDU7 716 aa22.56■■□□□ 1.2
SNED1-204ENST00000401884 RWDD1Q9H446 243 aaPredicted RBP22.56■■□□□ 1.2
SNED1-204ENST00000401884 CENPJQ9HC77 1338 aaPredicted RBP22.55■■□□□ 1.2
SNED1-204ENST00000401884 IPO8O15397 1037 aaKnown RBP22.55■■□□□ 1.2
SNED1-204ENST00000401884 NCLP19338 710 aaKnown RBP22.55■■□□□ 1.2
SNED1-204ENST00000401884 PDE4AP27815 886 aa22.54■■□□□ 1.2
SNED1-204ENST00000401884 PRDM2Q13029 1718 aa22.53■■□□□ 1.2
SNED1-204ENST00000401884 APAF1O14727 1248 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms