RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 FRAT1Q92837 279 aaPredicted RBP23.04■■□□□ 1.28
SNED1-204ENST00000401884 EFCAB2Q5VUJ9 269 aa23.03■■□□□ 1.28
SNED1-204ENST00000401884 PPM1GO15355 546 aaPredicted RBP23.03■■□□□ 1.28
SNED1-204ENST00000401884 ARXQ96QS3 562 aa23.02■■□□□ 1.28
SNED1-204ENST00000401884 RCAN3Q9UKA8 241 aa23.02■■□□□ 1.28
SNED1-204ENST00000401884 NUDCQ9Y266 331 aa23.02■■□□□ 1.28
SNED1-204ENST00000401884 BECN1Q14457 450 aa23.01■■□□□ 1.27
SNED1-204ENST00000401884 ST20-MTHFSA0A0A6YYL1 179 aa23.01■■□□□ 1.27
SNED1-204ENST00000401884 EIF5BO60841 1220 aaKnown RBP23■■□□□ 1.27
SNED1-204ENST00000401884 LAS1LQ9Y4W2 734 aaKnown RBP23■■□□□ 1.27
SNED1-204ENST00000401884 KANK1Q14678 1352 aa23■■□□□ 1.27
SNED1-204ENST00000401884 MYOM3Q5VTT5 1437 aa22.99■■□□□ 1.27
SNED1-204ENST00000401884 RSPH4AQ5TD94 716 aa22.99■■□□□ 1.27
SNED1-204ENST00000401884 UACAQ9BZF9 1416 aa22.98■■□□□ 1.27
SNED1-204ENST00000401884 FTSJ3Q8IY81 847 aaKnown RBP22.98■■□□□ 1.27
SNED1-204ENST00000401884 TOP2BQ02880 1626 aa22.98■■□□□ 1.27
SNED1-204ENST00000401884 NLRP13Q86W25 1043 aa22.98■■□□□ 1.27
SNED1-204ENST00000401884 ANP32BQ92688 251 aaKnown RBP22.97■■□□□ 1.27
SNED1-204ENST00000401884 MYH16Q9H6N6 1097 aa22.97■■□□□ 1.27
SNED1-204ENST00000401884 CASKIN1Q8WXD9 1431 aa22.96■■□□□ 1.27
SNED1-204ENST00000401884 POGKQ9P215 609 aa22.96■■□□□ 1.27
SNED1-204ENST00000401884 ZNF644Q9H582 1327 aaPredicted RBP22.96■■□□□ 1.27
SNED1-204ENST00000401884 MAPK8IP3Q9UPT6 1336 aa22.95■■□□□ 1.26
SNED1-204ENST00000401884 CUX1P39880 1505 aa22.93■■□□□ 1.26
SNED1-204ENST00000401884 U2SURPO15042 1029 aaKnown RBP22.93■■□□□ 1.26
SNED1-204ENST00000401884 GGT6Q6P531 493 aa22.93■■□□□ 1.26
SNED1-204ENST00000401884 MORC1Q86VD1 984 aa22.91■■□□□ 1.26
SNED1-204ENST00000401884 USP47Q96K76 1375 aa22.88■■□□□ 1.25
SNED1-204ENST00000401884 NCOA2Q15596 1464 aa22.88■■□□□ 1.25
SNED1-204ENST00000401884 ZBED9Q6R2W3 1325 aa22.87■■□□□ 1.25
SNED1-204ENST00000401884 KIF3BO15066 747 aa22.87■■□□□ 1.25
SNED1-204ENST00000401884 SAFB2Q14151 953 aaKnown RBP eCLIP22.87■■□□□ 1.25
SNED1-204ENST00000401884 KIF15Q9NS87 1388 aa22.84■■□□□ 1.25
SNED1-204ENST00000401884 PDE3BQ13370 1112 aa22.84■■□□□ 1.25
SNED1-204ENST00000401884 WASHC2AQ641Q2 1341 aa22.83■■□□□ 1.24
SNED1-204ENST00000401884 SRPK2P78362 688 aaKnown RBP22.83■■□□□ 1.24
SNED1-204ENST00000401884 MYBBP1AQ9BQG0 1328 aaKnown RBP22.82■■□□□ 1.24
SNED1-204ENST00000401884 AQRO60306 1485 aaKnown RBP eCLIP22.82■■□□□ 1.24
SNED1-204ENST00000401884 FYCO1Q9BQS8 1478 aa22.82■■□□□ 1.24
SNED1-204ENST00000401884 SPAG9O60271 1321 aaKnown RBP22.82■■□□□ 1.24
SNED1-204ENST00000401884 TCERG1O14776 1098 aaKnown RBP22.82■■□□□ 1.24
SNED1-204ENST00000401884 CCDC144AA2RUR9 1427 aa22.81■■□□□ 1.24
SNED1-204ENST00000401884 CCDC7Q96M83 1385 aa22.81■■□□□ 1.24
SNED1-204ENST00000401884 KIF7Q2M1P5 1343 aa22.81■■□□□ 1.24
SNED1-204ENST00000401884 HMGXB3Q12766 1538 aa22.8■■□□□ 1.24
SNED1-204ENST00000401884 PANK3Q9H999 370 aa22.79■■□□□ 1.24
SNED1-204ENST00000401884 PTPRGP23470 1445 aa22.79■■□□□ 1.24
SNED1-204ENST00000401884 MS4A1P11836 297 aa22.78■■□□□ 1.24
SNED1-204ENST00000401884 BICRAQ9NZM4 1560 aa22.77■■□□□ 1.24
SNED1-204ENST00000401884 GOLGA2Q08379 1002 aa22.77■■□□□ 1.24
SNED1-204ENST00000401884 STK26Q9P289 416 aa22.76■■□□□ 1.23
SNED1-204ENST00000401884 NESP48681 1621 aa22.76■■□□□ 1.23
SNED1-204ENST00000401884 C14orf37Q86TY3 774 aa22.75■■□□□ 1.23
SNED1-204ENST00000401884 DEKP35659 375 aaKnown RBP22.75■■□□□ 1.23
SNED1-204ENST00000401884 TIAM1Q13009 1591 aa22.74■■□□□ 1.23
SNED1-204ENST00000401884 ARID4BQ4LE39 1312 aaPredicted RBP22.74■■□□□ 1.23
SNED1-204ENST00000401884 U2AF1L5P0DN76 240 aaPredicted RBP22.73■■□□□ 1.23
SNED1-204ENST00000401884 U2AF1Q01081 240 aaKnown RBP eCLIP22.73■■□□□ 1.23
SNED1-204ENST00000401884 PLEKHG5O94827 1062 aa22.72■■□□□ 1.23
SNED1-204ENST00000401884 POLA1P09884 1462 aaPredicted RBP22.72■■□□□ 1.23
SNED1-204ENST00000401884 CCDC146Q8IYE0 955 aa22.71■■□□□ 1.23
SNED1-204ENST00000401884 PNNQ9H307 717 aaKnown RBP22.71■■□□□ 1.23
SNED1-204ENST00000401884 CNTLNQ9NXG0 1405 aa22.69■■□□□ 1.22
SNED1-204ENST00000401884 TOPBP1Q92547 1522 aa22.69■■□□□ 1.22
SNED1-204ENST00000401884 IPO9Q96P70 1041 aaKnown RBP22.69■■□□□ 1.22
SNED1-204ENST00000401884 HFM1A2PYH4 1435 aa22.69■■□□□ 1.22
SNED1-204ENST00000401884 EIF3AQ14152 1382 aaKnown RBP22.68■■□□□ 1.22
SNED1-204ENST00000401884 ZBTB7CA1YPR0 619 aa22.68■■□□□ 1.22
SNED1-204ENST00000401884 EFCAB5A4FU69 1503 aa22.68■■□□□ 1.22
SNED1-204ENST00000401884 ANKRD50Q9ULJ7 1429 aa22.67■■□□□ 1.22
SNED1-204ENST00000401884 MLECQ14165 292 aa22.66■■□□□ 1.22
SNED1-204ENST00000401884 EXOC6Q8TAG9 804 aa22.65■■□□□ 1.22
SNED1-204ENST00000401884 CHMP4BQ9H444 224 aaKnown RBP22.65■■□□□ 1.22
SNED1-204ENST00000401884 GOLGA6L22H0YM25 854 aa22.65■■□□□ 1.22
SNED1-204ENST00000401884 PLIN1O60240 522 aa22.65■■□□□ 1.22
SNED1-204ENST00000401884 NBPF8Q3BBV2 869 aa22.64■■□□□ 1.22
SNED1-204ENST00000401884 RRP1P56182 461 aaKnown RBP22.64■■□□□ 1.21
SNED1-204ENST00000401884 TRAK1Q9UPV9 953 aa22.63■■□□□ 1.21
SNED1-204ENST00000401884 WDR97A6NE52 1622 aa22.62■■□□□ 1.21
SNED1-204ENST00000401884 RTN4Q9NQC3 1192 aaKnown RBP22.62■■□□□ 1.21
SNED1-204ENST00000401884 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.61■■□□□ 1.21
SNED1-204ENST00000401884 GRIN2BQ13224 1484 aa22.61■■□□□ 1.21
SNED1-204ENST00000401884 HDGFL2Q7Z4V5 671 aaPredicted RBP22.6■■□□□ 1.21
SNED1-204ENST00000401884 NUTM2DQ5VT03 806 aaPredicted RBP22.59■■□□□ 1.21
SNED1-204ENST00000401884 WASHC2CQ9Y4E1 1318 aa22.59■■□□□ 1.21
SNED1-204ENST00000401884 CLUAP1Q96AJ1 413 aa22.58■■□□□ 1.21
SNED1-204ENST00000401884 PEG3Q9GZU2 1588 aa22.58■■□□□ 1.2
SNED1-204ENST00000401884 TRIM44Q96DX7 344 aaPredicted RBP22.57■■□□□ 1.2
SNED1-204ENST00000401884 NAIPQ13075 1403 aa22.57■■□□□ 1.2
SNED1-204ENST00000401884 MIA2Q96PC5 1412 aa22.56■■□□□ 1.2
SNED1-204ENST00000401884 SOX12O15370 315 aa22.56■■□□□ 1.2
SNED1-204ENST00000401884 FANCIQ9NVI1 1328 aa22.56■■□□□ 1.2
SNED1-204ENST00000401884 CASC1Q6TDU7 716 aa22.56■■□□□ 1.2
SNED1-204ENST00000401884 RWDD1Q9H446 243 aaPredicted RBP22.56■■□□□ 1.2
SNED1-204ENST00000401884 CENPJQ9HC77 1338 aaPredicted RBP22.55■■□□□ 1.2
SNED1-204ENST00000401884 IPO8O15397 1037 aaKnown RBP22.55■■□□□ 1.2
SNED1-204ENST00000401884 NCLP19338 710 aaKnown RBP22.55■■□□□ 1.2
SNED1-204ENST00000401884 PDE4AP27815 886 aa22.54■■□□□ 1.2
SNED1-204ENST00000401884 PRDM2Q13029 1718 aa22.53■■□□□ 1.2
SNED1-204ENST00000401884 APAF1O14727 1248 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms