RNA–Protein interactions for RNA: ENST00000399581.4

CHMP1B2P-201, Transcript of charged multivesicular body protein 1B2, pseudogene, humanhuman

BASIC

Gene CHMP1B2P, Length 597 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B2P-201ENST00000399581 NKX1-1Q15270 411 aaPredicted RBP11.31□□□□□ -0.6
CHMP1B2P-201ENST00000399581 ST18O60284 1047 aa11.28□□□□□ -0.6
CHMP1B2P-201ENST00000399581 HAP1P54257 671 aaPredicted RBP11.25□□□□□ -0.61
CHMP1B2P-201ENST00000399581 DNAJC5Q9H3Z4 198 aa11.25□□□□□ -0.61
CHMP1B2P-201ENST00000399581 SNPHO15079 494 aa11.21□□□□□ -0.61
CHMP1B2P-201ENST00000399581 HOXB3P14651 431 aaPredicted RBP11.21□□□□□ -0.61
CHMP1B2P-201ENST00000399581 CCDC180Q9P1Z9 1646 aa11.2□□□□□ -0.62
CHMP1B2P-201ENST00000399581 MARVELD3Q96A59 401 aa11.16□□□□□ -0.62
CHMP1B2P-201ENST00000399581 C2orf72A6NCS6 295 aa11.15□□□□□ -0.62
CHMP1B2P-201ENST00000399581 KIF3CO14782 793 aa11.14□□□□□ -0.63
CHMP1B2P-201ENST00000399581 GTPBP6O43824 516 aaPredicted RBP11.14□□□□□ -0.63
CHMP1B2P-201ENST00000399581 PRKCSHP14314 528 aaPredicted RBP11.11□□□□□ -0.63
CHMP1B2P-201ENST00000399581 DOK7Q18PE1 504 aa11.09□□□□□ -0.63
CHMP1B2P-201ENST00000399581 ZNF710Q8N1W2 664 aa11.08□□□□□ -0.64
CHMP1B2P-201ENST00000399581 TMC2Q8TDI7 906 aa11.07□□□□□ -0.64
CHMP1B2P-201ENST00000399581 EMP3P54852 163 aa11.06□□□□□ -0.64
CHMP1B2P-201ENST00000399581 POTEB3A0JP26 581 aa11.05□□□□□ -0.64
CHMP1B2P-201ENST00000399581 POTEBQ6S5H4 581 aa11.05□□□□□ -0.64
CHMP1B2P-201ENST00000399581 BCANQ96GW7 911 aa11.05□□□□□ -0.64
CHMP1B2P-201ENST00000399581 RYDENQ9NUL5 291 aaKnown RBP11.05□□□□□ -0.64
CHMP1B2P-201ENST00000399581 HOXB1P14653 301 aaPredicted RBP11.04□□□□□ -0.64
CHMP1B2P-201ENST00000399581 CDAN1Q8IWY9 1227 aa11.03□□□□□ -0.64
CHMP1B2P-201ENST00000399581 KHSRPQ92945 711 aaKnown RBP eCLIP11.03□□□□□ -0.64
CHMP1B2P-201ENST00000399581 FAM205CA6NFA0 338 aa11.02□□□□□ -0.65
CHMP1B2P-201ENST00000399581 GPR153Q6NV75 609 aa11.02□□□□□ -0.65
CHMP1B2P-201ENST00000399581 VSIG10Q8N0Z9 540 aa11.02□□□□□ -0.65
CHMP1B2P-201ENST00000399581 ARSIQ5FYB1 569 aa11.01□□□□□ -0.65
CHMP1B2P-201ENST00000399581 BBXQ8WY36 941 aaPredicted RBP11.01□□□□□ -0.65
CHMP1B2P-201ENST00000399581 RIMBP2O15034 1052 aa11□□□□□ -0.65
CHMP1B2P-201ENST00000399581 GPHNQ9NQX3 736 aaPredicted RBP11□□□□□ -0.65
CHMP1B2P-201ENST00000399581 DSG2Q14126 1118 aa10.99□□□□□ -0.65
CHMP1B2P-201ENST00000399581 HS3ST6Q96QI5 342 aa10.99□□□□□ -0.65
CHMP1B2P-201ENST00000399581 FOXK1P85037 733 aa10.97□□□□□ -0.65
CHMP1B2P-201ENST00000399581 PLPP6Q8IY26 295 aa10.97□□□□□ -0.65
CHMP1B2P-201ENST00000399581 CRISPLD2Q9H0B8 497 aa10.97□□□□□ -0.65
CHMP1B2P-201ENST00000399581 ZSWIM6Q9HCJ5 1215 aa10.97□□□□□ -0.65
CHMP1B2P-201ENST00000399581 NCKAP5LQ9HCH0 1330 aa10.97□□□□□ -0.65
CHMP1B2P-201ENST00000399581 CADPS2Q86UW7 1296 aa10.96□□□□□ -0.65
CHMP1B2P-201ENST00000399581 KDM2AQ9Y2K7 1162 aa10.95□□□□□ -0.66
CHMP1B2P-201ENST00000399581 ERBB3P21860 1342 aa10.93□□□□□ -0.66
CHMP1B2P-201ENST00000399581 SLC34A2O95436 690 aa10.93□□□□□ -0.66
CHMP1B2P-201ENST00000399581 PCDHGA4Q9Y5G9 962 aa10.93□□□□□ -0.66
CHMP1B2P-201ENST00000399581 NUDT7P0C024 238 aa10.91□□□□□ -0.66
CHMP1B2P-201ENST00000399581 VARS2Q5ST30 1063 aaKnown RBP10.91□□□□□ -0.66
CHMP1B2P-201ENST00000399581 PAXIP1Q6ZW49 1069 aaPredicted RBP10.91□□□□□ -0.66
CHMP1B2P-201ENST00000399581 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.9□□□□□ -0.66
CHMP1B2P-201ENST00000399581 CFAP44Q96MT7 982 aa10.89□□□□□ -0.67
CHMP1B2P-201ENST00000399581 PDE4AP27815 886 aa10.88□□□□□ -0.67
CHMP1B2P-201ENST00000399581 PPP1R15BQ5SWA1 713 aa10.88□□□□□ -0.67
CHMP1B2P-201ENST00000399581 SPRYD3Q8NCJ5 442 aa10.88□□□□□ -0.67
CHMP1B2P-201ENST00000399581 LARP6Q9BRS8 491 aaKnown RBP10.88□□□□□ -0.67
CHMP1B2P-201ENST00000399581 KRTAP3-3Q9BYR6 98 aa10.88□□□□□ -0.67
CHMP1B2P-201ENST00000399581 KRTAP3-2Q9BYR7 98 aa10.88□□□□□ -0.67
CHMP1B2P-201ENST00000399581 PTCD2Q8WV60 388 aaKnown RBP10.87□□□□□ -0.67
CHMP1B2P-201ENST00000399581 ZNF316A6NFI3 1004 aaPredicted RBP10.85□□□□□ -0.67
CHMP1B2P-201ENST00000399581 TPRNQ4KMQ1 711 aa10.85□□□□□ -0.67
CHMP1B2P-201ENST00000399581 UPF1Q92900 1129 aaKnown RBP eCLIP10.84□□□□□ -0.67
CHMP1B2P-201ENST00000399581 LHX6Q9UPM6 363 aa10.84□□□□□ -0.67
CHMP1B2P-201ENST00000399581 KDM4FA0A1W2PPD8 638 aa10.83□□□□□ -0.68
CHMP1B2P-201ENST00000399581 MFSD10Q14728 455 aa10.83□□□□□ -0.68
CHMP1B2P-201ENST00000399581 DDX27Q96GQ7 796 aaKnown RBP10.83□□□□□ -0.68
CHMP1B2P-201ENST00000399581 OXER1Q8TDS5 423 aa10.81□□□□□ -0.68
CHMP1B2P-201ENST00000399581 MMRN1Q13201 1228 aa10.8□□□□□ -0.68
CHMP1B2P-201ENST00000399581 ZNF687Q8N1G0 1237 aa10.79□□□□□ -0.68
CHMP1B2P-201ENST00000399581 RB1CC1Q8TDY2 1594 aa10.77□□□□□ -0.68
CHMP1B2P-201ENST00000399581 TSHZ2Q9NRE2 1034 aa10.77□□□□□ -0.69
CHMP1B2P-201ENST00000399581 EMILIN3Q9NT22 766 aa10.77□□□□□ -0.69
CHMP1B2P-201ENST00000399581 SPNS2Q8IVW8 549 aa10.76□□□□□ -0.69
CHMP1B2P-201ENST00000399581 TBC1D12O60347 775 aa10.75□□□□□ -0.69
CHMP1B2P-201ENST00000399581 POTEEQ6S8J3 1075 aa10.74□□□□□ -0.69
CHMP1B2P-201ENST00000399581 AXIN2Q9Y2T1 843 aa10.71□□□□□ -0.69
CHMP1B2P-201ENST00000399581 NACADO15069 1562 aa10.7□□□□□ -0.7
CHMP1B2P-201ENST00000399581 EVI5O60447 810 aa10.68□□□□□ -0.7
CHMP1B2P-201ENST00000399581 CAMK2BQ13554 666 aa10.68□□□□□ -0.7
CHMP1B2P-201ENST00000399581 MAP3K9P80192 1104 aa10.67□□□□□ -0.7
CHMP1B2P-201ENST00000399581 ANKRD13DQ6ZTN6 518 aa10.64□□□□□ -0.71
CHMP1B2P-201ENST00000399581 ANO8Q9HCE9 1232 aaPredicted RBP10.64□□□□□ -0.71
CHMP1B2P-201ENST00000399581 PSDA5PKW4 1024 aaPredicted RBP10.63□□□□□ -0.71
CHMP1B2P-201ENST00000399581 DPYSL4O14531 572 aa10.63□□□□□ -0.71
CHMP1B2P-201ENST00000399581 LSM11P83369 360 aaKnown RBP eCLIP10.63□□□□□ -0.71
CHMP1B2P-201ENST00000399581 PPP4R3BQ5MIZ7 849 aa10.63□□□□□ -0.71
CHMP1B2P-201ENST00000399581 ZNF454Q8N9F8 522 aa10.63□□□□□ -0.71
CHMP1B2P-201ENST00000399581 PSEN2P49810 448 aa10.62□□□□□ -0.71
CHMP1B2P-201ENST00000399581 PBX2P40425 430 aa10.61□□□□□ -0.71
CHMP1B2P-201ENST00000399581 FOSBP53539 338 aa10.61□□□□□ -0.71
CHMP1B2P-201ENST00000399581 DMRTA1Q5VZB9 504 aa10.6□□□□□ -0.71
CHMP1B2P-201ENST00000399581 ARHGAP33O14559 1287 aa10.59□□□□□ -0.71
CHMP1B2P-201ENST00000399581 MYO15BQ96JP2 1530 aa10.58□□□□□ -0.72
CHMP1B2P-201ENST00000399581 JPH4Q96JJ6 628 aa10.57□□□□□ -0.72
CHMP1B2P-201ENST00000399581 E2F4Q16254 413 aa10.56□□□□□ -0.72
CHMP1B2P-201ENST00000399581 KCNK17Q96T54 332 aa10.56□□□□□ -0.72
CHMP1B2P-201ENST00000399581 WDR70Q9NW82 654 aa10.56□□□□□ -0.72
CHMP1B2P-201ENST00000399581 ADAM33Q9BZ11 813 aa10.55□□□□□ -0.72
CHMP1B2P-201ENST00000399581 PCDHGA10Q9Y5H3 936 aa10.55□□□□□ -0.72
CHMP1B2P-201ENST00000399581 BCL2L12Q9HB09 334 aa10.53□□□□□ -0.72
CHMP1B2P-201ENST00000399581 ADGRD1Q6QNK2 874 aa10.52□□□□□ -0.73
CHMP1B2P-201ENST00000399581 ZDHHC16Q969W1 377 aa10.52□□□□□ -0.73
CHMP1B2P-201ENST00000399581 MYT1LQ9UL68 1186 aa10.52□□□□□ -0.73
CHMP1B2P-201ENST00000399581 NBR1Q14596 966 aa10.5□□□□□ -0.73
CHMP1B2P-201ENST00000399581 DDX12PQ92771 950 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms