RNA–Protein interactions for RNA: ENST00000399581.4

CHMP1B2P-201, Transcript of charged multivesicular body protein 1B2, pseudogene, humanhuman

BASIC

Gene CHMP1B2P, Length 597 nt, Biotype transcribed unitary pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B2P-201ENST00000399581 NKX1-1Q15270 411 aaPredicted RBP11.31□□□□□ -0.6
CHMP1B2P-201ENST00000399581 ST18O60284 1047 aa11.28□□□□□ -0.6
CHMP1B2P-201ENST00000399581 HAP1P54257 671 aaPredicted RBP11.25□□□□□ -0.61
CHMP1B2P-201ENST00000399581 DNAJC5Q9H3Z4 198 aa11.25□□□□□ -0.61
CHMP1B2P-201ENST00000399581 SNPHO15079 494 aa11.21□□□□□ -0.61
CHMP1B2P-201ENST00000399581 HOXB3P14651 431 aaPredicted RBP11.21□□□□□ -0.61
CHMP1B2P-201ENST00000399581 CCDC180Q9P1Z9 1646 aa11.2□□□□□ -0.62
CHMP1B2P-201ENST00000399581 MARVELD3Q96A59 401 aa11.16□□□□□ -0.62
CHMP1B2P-201ENST00000399581 C2orf72A6NCS6 295 aa11.15□□□□□ -0.62
CHMP1B2P-201ENST00000399581 KIF3CO14782 793 aa11.14□□□□□ -0.63
CHMP1B2P-201ENST00000399581 GTPBP6O43824 516 aaPredicted RBP11.14□□□□□ -0.63
CHMP1B2P-201ENST00000399581 PRKCSHP14314 528 aaPredicted RBP11.11□□□□□ -0.63
CHMP1B2P-201ENST00000399581 DOK7Q18PE1 504 aa11.09□□□□□ -0.63
CHMP1B2P-201ENST00000399581 ZNF710Q8N1W2 664 aa11.08□□□□□ -0.64
CHMP1B2P-201ENST00000399581 TMC2Q8TDI7 906 aa11.07□□□□□ -0.64
CHMP1B2P-201ENST00000399581 EMP3P54852 163 aa11.06□□□□□ -0.64
CHMP1B2P-201ENST00000399581 POTEB3A0JP26 581 aa11.05□□□□□ -0.64
CHMP1B2P-201ENST00000399581 POTEBQ6S5H4 581 aa11.05□□□□□ -0.64
CHMP1B2P-201ENST00000399581 BCANQ96GW7 911 aa11.05□□□□□ -0.64
CHMP1B2P-201ENST00000399581 RYDENQ9NUL5 291 aaKnown RBP11.05□□□□□ -0.64
CHMP1B2P-201ENST00000399581 HOXB1P14653 301 aaPredicted RBP11.04□□□□□ -0.64
CHMP1B2P-201ENST00000399581 CDAN1Q8IWY9 1227 aa11.03□□□□□ -0.64
CHMP1B2P-201ENST00000399581 KHSRPQ92945 711 aaKnown RBP eCLIP11.03□□□□□ -0.64
CHMP1B2P-201ENST00000399581 FAM205CA6NFA0 338 aa11.02□□□□□ -0.65
CHMP1B2P-201ENST00000399581 GPR153Q6NV75 609 aa11.02□□□□□ -0.65
CHMP1B2P-201ENST00000399581 VSIG10Q8N0Z9 540 aa11.02□□□□□ -0.65
CHMP1B2P-201ENST00000399581 ARSIQ5FYB1 569 aa11.01□□□□□ -0.65
CHMP1B2P-201ENST00000399581 BBXQ8WY36 941 aaPredicted RBP11.01□□□□□ -0.65
CHMP1B2P-201ENST00000399581 RIMBP2O15034 1052 aa11□□□□□ -0.65
CHMP1B2P-201ENST00000399581 GPHNQ9NQX3 736 aaPredicted RBP11□□□□□ -0.65
CHMP1B2P-201ENST00000399581 DSG2Q14126 1118 aa10.99□□□□□ -0.65
CHMP1B2P-201ENST00000399581 HS3ST6Q96QI5 342 aa10.99□□□□□ -0.65
CHMP1B2P-201ENST00000399581 FOXK1P85037 733 aa10.97□□□□□ -0.65
CHMP1B2P-201ENST00000399581 PLPP6Q8IY26 295 aa10.97□□□□□ -0.65
CHMP1B2P-201ENST00000399581 CRISPLD2Q9H0B8 497 aa10.97□□□□□ -0.65
CHMP1B2P-201ENST00000399581 ZSWIM6Q9HCJ5 1215 aa10.97□□□□□ -0.65
CHMP1B2P-201ENST00000399581 NCKAP5LQ9HCH0 1330 aa10.97□□□□□ -0.65
CHMP1B2P-201ENST00000399581 CADPS2Q86UW7 1296 aa10.96□□□□□ -0.65
CHMP1B2P-201ENST00000399581 KDM2AQ9Y2K7 1162 aa10.95□□□□□ -0.66
CHMP1B2P-201ENST00000399581 ERBB3P21860 1342 aa10.93□□□□□ -0.66
CHMP1B2P-201ENST00000399581 SLC34A2O95436 690 aa10.93□□□□□ -0.66
CHMP1B2P-201ENST00000399581 PCDHGA4Q9Y5G9 962 aa10.93□□□□□ -0.66
CHMP1B2P-201ENST00000399581 NUDT7P0C024 238 aa10.91□□□□□ -0.66
CHMP1B2P-201ENST00000399581 VARS2Q5ST30 1063 aaKnown RBP10.91□□□□□ -0.66
CHMP1B2P-201ENST00000399581 PAXIP1Q6ZW49 1069 aaPredicted RBP10.91□□□□□ -0.66
CHMP1B2P-201ENST00000399581 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.9□□□□□ -0.66
CHMP1B2P-201ENST00000399581 CFAP44Q96MT7 982 aa10.89□□□□□ -0.67
CHMP1B2P-201ENST00000399581 PDE4AP27815 886 aa10.88□□□□□ -0.67
CHMP1B2P-201ENST00000399581 PPP1R15BQ5SWA1 713 aa10.88□□□□□ -0.67
CHMP1B2P-201ENST00000399581 SPRYD3Q8NCJ5 442 aa10.88□□□□□ -0.67
CHMP1B2P-201ENST00000399581 LARP6Q9BRS8 491 aaKnown RBP10.88□□□□□ -0.67
CHMP1B2P-201ENST00000399581 KRTAP3-3Q9BYR6 98 aa10.88□□□□□ -0.67
CHMP1B2P-201ENST00000399581 KRTAP3-2Q9BYR7 98 aa10.88□□□□□ -0.67
CHMP1B2P-201ENST00000399581 PTCD2Q8WV60 388 aaKnown RBP10.87□□□□□ -0.67
CHMP1B2P-201ENST00000399581 ZNF316A6NFI3 1004 aaPredicted RBP10.85□□□□□ -0.67
CHMP1B2P-201ENST00000399581 TPRNQ4KMQ1 711 aa10.85□□□□□ -0.67
CHMP1B2P-201ENST00000399581 UPF1Q92900 1129 aaKnown RBP eCLIP10.84□□□□□ -0.67
CHMP1B2P-201ENST00000399581 LHX6Q9UPM6 363 aa10.84□□□□□ -0.67
CHMP1B2P-201ENST00000399581 KDM4FA0A1W2PPD8 638 aa10.83□□□□□ -0.68
CHMP1B2P-201ENST00000399581 MFSD10Q14728 455 aa10.83□□□□□ -0.68
CHMP1B2P-201ENST00000399581 DDX27Q96GQ7 796 aaKnown RBP10.83□□□□□ -0.68
CHMP1B2P-201ENST00000399581 OXER1Q8TDS5 423 aa10.81□□□□□ -0.68
CHMP1B2P-201ENST00000399581 MMRN1Q13201 1228 aa10.8□□□□□ -0.68
CHMP1B2P-201ENST00000399581 ZNF687Q8N1G0 1237 aa10.79□□□□□ -0.68
CHMP1B2P-201ENST00000399581 RB1CC1Q8TDY2 1594 aa10.77□□□□□ -0.68
CHMP1B2P-201ENST00000399581 TSHZ2Q9NRE2 1034 aa10.77□□□□□ -0.69
CHMP1B2P-201ENST00000399581 EMILIN3Q9NT22 766 aa10.77□□□□□ -0.69
CHMP1B2P-201ENST00000399581 SPNS2Q8IVW8 549 aa10.76□□□□□ -0.69
CHMP1B2P-201ENST00000399581 TBC1D12O60347 775 aa10.75□□□□□ -0.69
CHMP1B2P-201ENST00000399581 POTEEQ6S8J3 1075 aa10.74□□□□□ -0.69
CHMP1B2P-201ENST00000399581 AXIN2Q9Y2T1 843 aa10.71□□□□□ -0.69
CHMP1B2P-201ENST00000399581 NACADO15069 1562 aa10.7□□□□□ -0.7
CHMP1B2P-201ENST00000399581 EVI5O60447 810 aa10.68□□□□□ -0.7
CHMP1B2P-201ENST00000399581 CAMK2BQ13554 666 aa10.68□□□□□ -0.7
CHMP1B2P-201ENST00000399581 MAP3K9P80192 1104 aa10.67□□□□□ -0.7
CHMP1B2P-201ENST00000399581 ANKRD13DQ6ZTN6 518 aa10.64□□□□□ -0.71
CHMP1B2P-201ENST00000399581 ANO8Q9HCE9 1232 aaPredicted RBP10.64□□□□□ -0.71
CHMP1B2P-201ENST00000399581 PSDA5PKW4 1024 aaPredicted RBP10.63□□□□□ -0.71
CHMP1B2P-201ENST00000399581 DPYSL4O14531 572 aa10.63□□□□□ -0.71
CHMP1B2P-201ENST00000399581 LSM11P83369 360 aaKnown RBP eCLIP10.63□□□□□ -0.71
CHMP1B2P-201ENST00000399581 PPP4R3BQ5MIZ7 849 aa10.63□□□□□ -0.71
CHMP1B2P-201ENST00000399581 ZNF454Q8N9F8 522 aa10.63□□□□□ -0.71
CHMP1B2P-201ENST00000399581 PSEN2P49810 448 aa10.62□□□□□ -0.71
CHMP1B2P-201ENST00000399581 PBX2P40425 430 aa10.61□□□□□ -0.71
CHMP1B2P-201ENST00000399581 FOSBP53539 338 aa10.61□□□□□ -0.71
CHMP1B2P-201ENST00000399581 DMRTA1Q5VZB9 504 aa10.6□□□□□ -0.71
CHMP1B2P-201ENST00000399581 ARHGAP33O14559 1287 aa10.59□□□□□ -0.71
CHMP1B2P-201ENST00000399581 MYO15BQ96JP2 1530 aa10.58□□□□□ -0.72
CHMP1B2P-201ENST00000399581 JPH4Q96JJ6 628 aa10.57□□□□□ -0.72
CHMP1B2P-201ENST00000399581 E2F4Q16254 413 aa10.56□□□□□ -0.72
CHMP1B2P-201ENST00000399581 KCNK17Q96T54 332 aa10.56□□□□□ -0.72
CHMP1B2P-201ENST00000399581 WDR70Q9NW82 654 aa10.56□□□□□ -0.72
CHMP1B2P-201ENST00000399581 ADAM33Q9BZ11 813 aa10.55□□□□□ -0.72
CHMP1B2P-201ENST00000399581 PCDHGA10Q9Y5H3 936 aa10.55□□□□□ -0.72
CHMP1B2P-201ENST00000399581 BCL2L12Q9HB09 334 aa10.53□□□□□ -0.72
CHMP1B2P-201ENST00000399581 ADGRD1Q6QNK2 874 aa10.52□□□□□ -0.73
CHMP1B2P-201ENST00000399581 ZDHHC16Q969W1 377 aa10.52□□□□□ -0.73
CHMP1B2P-201ENST00000399581 MYT1LQ9UL68 1186 aa10.52□□□□□ -0.73
CHMP1B2P-201ENST00000399581 NBR1Q14596 966 aa10.5□□□□□ -0.73
CHMP1B2P-201ENST00000399581 DDX12PQ92771 950 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 388.2 ms