RNA–Protein interactions for RNA: ENST00000399581.4

CHMP1B2P-201, Transcript of charged multivesicular body protein 1B2, pseudogene, humanhuman

BASIC

Gene CHMP1B2P, Length 597 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B2P-201ENST00000399581 AEBP2Q6ZN18 517 aaPredicted RBP24.77■■□□□ 1.56
CHMP1B2P-201ENST00000399581 CHIC1Q5VXU3 224 aa23.78■■□□□ 1.4
CHMP1B2P-201ENST00000399581 PHF23Q9BUL5 403 aaPredicted RBP20.95■□□□□ 0.94
CHMP1B2P-201ENST00000399581 SENP3Q9H4L4 574 aaPredicted RBP20.93■□□□□ 0.94
CHMP1B2P-201ENST00000399581 FOXD1Q16676 465 aa19.57■□□□□ 0.72
CHMP1B2P-201ENST00000399581 PLPPR3Q6T4P5 718 aa19.11■□□□□ 0.65
CHMP1B2P-201ENST00000399581 POTEDQ86YR6 584 aa18.67■□□□□ 0.58
CHMP1B2P-201ENST00000399581 PPP6R1Q9UPN7 881 aa18.61■□□□□ 0.57
CHMP1B2P-201ENST00000399581 ADRA2BP18089 450 aa18.56■□□□□ 0.56
CHMP1B2P-201ENST00000399581 PIAS4Q8N2W9 510 aaPredicted RBP18.33■□□□□ 0.52
CHMP1B2P-201ENST00000399581 MSH5O43196 834 aa18.06■□□□□ 0.48
CHMP1B2P-201ENST00000399581 MAPK8IP2Q13387 824 aaPredicted RBP16.97■□□□□ 0.31
CHMP1B2P-201ENST00000399581 PPP4R3CPQ6ZMV5 832 aa16.85■□□□□ 0.29
CHMP1B2P-201ENST00000399581 SCAF1Q9H7N4 1312 aaKnown RBP16.82■□□□□ 0.28
CHMP1B2P-201ENST00000399581 DMRT2Q9Y5R5 561 aa16.69■□□□□ 0.26
CHMP1B2P-201ENST00000399581 CNKSR2Q8WXI2 1034 aa16.41■□□□□ 0.22
CHMP1B2P-201ENST00000399581 HOXD11P31277 338 aaPredicted RBP16.21■□□□□ 0.19
CHMP1B2P-201ENST00000399581 NCBP3Q53F19 620 aaKnown RBP16.21■□□□□ 0.19
CHMP1B2P-201ENST00000399581 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
CHMP1B2P-201ENST00000399581 KCNA4P22459 653 aa16.13■□□□□ 0.17
CHMP1B2P-201ENST00000399581 NPM3O75607 178 aaKnown RBP16.09■□□□□ 0.17
CHMP1B2P-201ENST00000399581 DCAF8L1A6NGE4 600 aa16.01■□□□□ 0.15
CHMP1B2P-201ENST00000399581 CACNB1Q02641 598 aaPredicted RBP15.6■□□□□ 0.09
CHMP1B2P-201ENST00000399581 DNAJC5BQ9UF47 199 aa15.56■□□□□ 0.08
CHMP1B2P-201ENST00000399581 RNF39Q9H2S5 420 aa15.5■□□□□ 0.07
CHMP1B2P-201ENST00000399581 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.44■□□□□ 0.06
CHMP1B2P-201ENST00000399581 SLC4A2P04920 1241 aa15.3■□□□□ 0.04
CHMP1B2P-201ENST00000399581 C1QBPQ07021 282 aaKnown RBP15.24■□□□□ 0.03
CHMP1B2P-201ENST00000399581 SLC4A1APQ9BWU0 796 aaKnown RBP15.24■□□□□ 0.03
CHMP1B2P-201ENST00000399581 U3KPZ7 1027 aaPredicted RBP15.21■□□□□ 0.03
CHMP1B2P-201ENST00000399581 SPINK5Q9NQ38 1064 aaPredicted RBP14.91□□□□□ -0.02
CHMP1B2P-201ENST00000399581 ZBTB22O15209 634 aa14.87□□□□□ -0.03
CHMP1B2P-201ENST00000399581 FOXD4L1Q9NU39 408 aa14.86□□□□□ -0.03
CHMP1B2P-201ENST00000399581 CAPN15O75808 1086 aa14.81□□□□□ -0.04
CHMP1B2P-201ENST00000399581 MYCNP04198 464 aaPredicted RBP14.81□□□□□ -0.04
CHMP1B2P-201ENST00000399581 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.75□□□□□ -0.05
CHMP1B2P-201ENST00000399581 HNRNPUL2Q1KMD3 747 aaKnown RBP14.75□□□□□ -0.05
CHMP1B2P-201ENST00000399581 SAMD1Q6SPF0 538 aaPredicted RBP14.72□□□□□ -0.05
CHMP1B2P-201ENST00000399581 TRHP20396 242 aaPredicted RBP14.68□□□□□ -0.06
CHMP1B2P-201ENST00000399581 DSG3P32926 999 aa14.66□□□□□ -0.06
CHMP1B2P-201ENST00000399581 APLP2Q06481 763 aa14.65□□□□□ -0.06
CHMP1B2P-201ENST00000399581 ZNF219Q9P2Y4 722 aaPredicted RBP14.58□□□□□ -0.08
CHMP1B2P-201ENST00000399581 ATF5Q9Y2D1 282 aaPredicted RBP14.57□□□□□ -0.08
CHMP1B2P-201ENST00000399581 ABCB7O75027 752 aa14.56□□□□□ -0.08
CHMP1B2P-201ENST00000399581 EHMT2Q96KQ7 1210 aa14.48□□□□□ -0.09
CHMP1B2P-201ENST00000399581 CSRNP3Q8WYN3 585 aa14.46□□□□□ -0.09
CHMP1B2P-201ENST00000399581 POTEHQ6S545 545 aa14.44□□□□□ -0.1
CHMP1B2P-201ENST00000399581 POLA2Q14181 598 aa14.35□□□□□ -0.11
CHMP1B2P-201ENST00000399581 ATXN8OSP0DMR3 200 aa14.32□□□□□ -0.12
CHMP1B2P-201ENST00000399581 ZBTB12Q9Y330 459 aaPredicted RBP13.97□□□□□ -0.17
CHMP1B2P-201ENST00000399581 OSCARQ8IYS5 282 aa13.91□□□□□ -0.18
CHMP1B2P-201ENST00000399581 MKRN4PQ13434 485 aaPredicted RBP13.89□□□□□ -0.19
CHMP1B2P-201ENST00000399581 RBM42Q9BTD8 480 aaKnown RBP13.87□□□□□ -0.19
CHMP1B2P-201ENST00000399581 FBLN2P98095 1184 aa13.82□□□□□ -0.2
CHMP1B2P-201ENST00000399581 AKT1S1Q96B36 256 aa13.67□□□□□ -0.22
CHMP1B2P-201ENST00000399581 SPDYE2BA6NHP3 402 aa13.62□□□□□ -0.23
CHMP1B2P-201ENST00000399581 SPDYE6P0CI01 402 aa13.62□□□□□ -0.23
CHMP1B2P-201ENST00000399581 SPDYE2Q495Y8 402 aa13.62□□□□□ -0.23
CHMP1B2P-201ENST00000399581 REM2Q8IYK8 340 aaPredicted RBP13.59□□□□□ -0.23
CHMP1B2P-201ENST00000399581 ZNF692Q9BU19 519 aaPredicted RBP13.55□□□□□ -0.24
CHMP1B2P-201ENST00000399581 SSUH2Q9Y2M2 353 aa13.52□□□□□ -0.25
CHMP1B2P-201ENST00000399581 CHRDL2Q6WN34 429 aa13.5□□□□□ -0.25
CHMP1B2P-201ENST00000399581 PITPNM1O00562 1244 aa13.46□□□□□ -0.25
CHMP1B2P-201ENST00000399581 PABPN1Q86U42 306 aaKnown RBP eCLIP13.39□□□□□ -0.27
CHMP1B2P-201ENST00000399581 SPDYE4A6NLX3 237 aa13.35□□□□□ -0.27
CHMP1B2P-201ENST00000399581 CLEC11AQ9Y240 323 aa13.32□□□□□ -0.28
CHMP1B2P-201ENST00000399581 SPDYE1Q8NFV5 336 aaPredicted RBP13.3□□□□□ -0.28
CHMP1B2P-201ENST00000399581 PIP4P2Q8N4L2 257 aa13.29□□□□□ -0.28
CHMP1B2P-201ENST00000399581 FXR2P51116 673 aaKnown RBP eCLIP13.24□□□□□ -0.29
CHMP1B2P-201ENST00000399581 SP7Q8TDD2 431 aaPredicted RBP13.13□□□□□ -0.31
CHMP1B2P-201ENST00000399581 PRR29P0C7W0 189 aa13.11□□□□□ -0.31
CHMP1B2P-201ENST00000399581 PRKAR2AP13861 404 aaKnown RBP13.1□□□□□ -0.31
CHMP1B2P-201ENST00000399581 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
CHMP1B2P-201ENST00000399581 FKBP8Q14318 412 aa13.08□□□□□ -0.32
CHMP1B2P-201ENST00000399581 PROM2Q8N271 834 aa13.08□□□□□ -0.32
CHMP1B2P-201ENST00000399581 STAG3Q9UJ98 1225 aa12.99□□□□□ -0.33
CHMP1B2P-201ENST00000399581 HAX1O00165 279 aa12.93□□□□□ -0.34
CHMP1B2P-201ENST00000399581 CREBZFQ9NS37 354 aa12.93□□□□□ -0.34
CHMP1B2P-201ENST00000399581 EVX2Q03828 476 aa12.9□□□□□ -0.34
CHMP1B2P-201ENST00000399581 FARP1Q9Y4F1 1045 aaPredicted RBP12.86□□□□□ -0.35
CHMP1B2P-201ENST00000399581 C19orf67A6NJJ6 358 aa12.81□□□□□ -0.36
CHMP1B2P-201ENST00000399581 MNX1P50219 401 aaPredicted RBP12.76□□□□□ -0.37
CHMP1B2P-201ENST00000399581 CD44P16070 742 aaKnown RBP12.7□□□□□ -0.38
CHMP1B2P-201ENST00000399581 MIER1Q8N108 512 aa12.68□□□□□ -0.38
CHMP1B2P-201ENST00000399581 PLCD3Q8N3E9 789 aa12.62□□□□□ -0.39
CHMP1B2P-201ENST00000399581 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
CHMP1B2P-201ENST00000399581 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
CHMP1B2P-201ENST00000399581 ZRANB1Q9UGI0 708 aa12.58□□□□□ -0.4
CHMP1B2P-201ENST00000399581 NISCHQ9Y2I1 1504 aa12.56□□□□□ -0.4
CHMP1B2P-201ENST00000399581 GABBR2O75899 941 aa12.55□□□□□ -0.4
CHMP1B2P-201ENST00000399581 PLEKHG5O94827 1062 aa12.55□□□□□ -0.4
CHMP1B2P-201ENST00000399581 VASPP50552 380 aaPredicted RBP12.51□□□□□ -0.41
CHMP1B2P-201ENST00000399581 ZNF579Q8NAF0 562 aaKnown RBP12.5□□□□□ -0.41
CHMP1B2P-201ENST00000399581 RASEFQ8IZ41 740 aa12.48□□□□□ -0.41
CHMP1B2P-201ENST00000399581 PHF12Q96QT6 1004 aa12.48□□□□□ -0.41
CHMP1B2P-201ENST00000399581 TSPYL2Q9H2G4 693 aaPredicted RBP12.48□□□□□ -0.41
CHMP1B2P-201ENST00000399581 PAK3O75914 559 aaPredicted RBP12.47□□□□□ -0.41
CHMP1B2P-201ENST00000399581 NUBP1P53384 320 aa12.43□□□□□ -0.42
CHMP1B2P-201ENST00000399581 ZBTB47Q9UFB7 747 aaPredicted RBP12.41□□□□□ -0.42
CHMP1B2P-201ENST00000399581 RTN4Q9NQC3 1192 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms