RNA–Protein interactions for RNA: ENST00000399543.1

AC025171.2-203, humanhuman

TSL 1 (best)

Gene AC025171.2, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025171.2-203ENST00000399543 NUP153P49790 1475 aaKnown RBP18.25■□□□□ 0.51
AC025171.2-203ENST00000399543 ROCK1Q13464 1354 aa18.24■□□□□ 0.51
AC025171.2-203ENST00000399543 NEFLP07196 543 aa18.23■□□□□ 0.51
AC025171.2-203ENST00000399543 L3MBTL2Q969R5 705 aa18.23■□□□□ 0.51
AC025171.2-203ENST00000399543 ABCC5O15440 1437 aa18.22■□□□□ 0.51
AC025171.2-203ENST00000399543 FOXD1Q16676 465 aa18.22■□□□□ 0.51
AC025171.2-203ENST00000399543 EIF4G2P78344 907 aaKnown RBP eCLIP18.22■□□□□ 0.51
AC025171.2-203ENST00000399543 RAPGEF6Q8TEU7 1601 aa18.21■□□□□ 0.51
AC025171.2-203ENST00000399543 ANKRD30BQ9BXX2 1392 aa18.2■□□□□ 0.5
AC025171.2-203ENST00000399543 RPRD2Q5VT52 1461 aaKnown RBP18.2■□□□□ 0.5
AC025171.2-203ENST00000399543 ZNF644Q9H582 1327 aaPredicted RBP18.19■□□□□ 0.5
AC025171.2-203ENST00000399543 GRIN2AQ12879 1464 aa18.19■□□□□ 0.5
AC025171.2-203ENST00000399543 TEX14Q8IWB6 1497 aa18.18■□□□□ 0.5
AC025171.2-203ENST00000399543 CNTLNQ9NXG0 1405 aa18.17■□□□□ 0.5
AC025171.2-203ENST00000399543 EIF4G3O43432 1585 aaKnown RBP18.17■□□□□ 0.5
AC025171.2-203ENST00000399543 NCOA1Q15788 1441 aa18.16■□□□□ 0.5
AC025171.2-203ENST00000399543 HNRNPUQ00839 825 aaKnown RBP eCLIP18.15■□□□□ 0.5
AC025171.2-203ENST00000399543 C11orf95C9JLR9 678 aaPredicted RBP18.14■□□□□ 0.5
AC025171.2-203ENST00000399543 NBPF8Q3BBV2 869 aa18.13■□□□□ 0.49
AC025171.2-203ENST00000399543 CDK11AQ9UQ88 783 aaPredicted RBP18.13■□□□□ 0.49
AC025171.2-203ENST00000399543 CCDC7Q96M83 1385 aa18.13■□□□□ 0.49
AC025171.2-203ENST00000399543 PRG4Q92954 1404 aaPredicted RBP18.12■□□□□ 0.49
AC025171.2-203ENST00000399543 SLC4A1APQ9BWU0 796 aaKnown RBP18.11■□□□□ 0.49
AC025171.2-203ENST00000399543 TROQ12816 1431 aaPredicted RBP18.11■□□□□ 0.49
AC025171.2-203ENST00000399543 CAMSAP2Q08AD1 1489 aa18.1■□□□□ 0.49
AC025171.2-203ENST00000399543 POLR1AO95602 1720 aaPredicted RBP18.1■□□□□ 0.49
AC025171.2-203ENST00000399543 SPATA31E1Q6ZUB1 1445 aa18.1■□□□□ 0.49
AC025171.2-203ENST00000399543 ITSN2Q9NZM3 1697 aa18.09■□□□□ 0.49
AC025171.2-203ENST00000399543 PZPP20742 1482 aa18.09■□□□□ 0.49
AC025171.2-203ENST00000399543 CCDC184Q52MB2 194 aa18.09■□□□□ 0.49
AC025171.2-203ENST00000399543 ADGBQ8N7X0 1667 aa18.08■□□□□ 0.49
AC025171.2-203ENST00000399543 PLB1Q6P1J6 1458 aa18.08■□□□□ 0.48
AC025171.2-203ENST00000399543 CEP170Q5SW79 1584 aa18.07■□□□□ 0.48
AC025171.2-203ENST00000399543 GPATCH8Q9UKJ3 1502 aaKnown RBP18.07■□□□□ 0.48
AC025171.2-203ENST00000399543 PRKRIP1Q9H875 184 aaPredicted RBP18.07■□□□□ 0.48
AC025171.2-203ENST00000399543 KIF14Q15058 1648 aa18.07■□□□□ 0.48
AC025171.2-203ENST00000399543 ADCY10Q96PN6 1610 aa18.06■□□□□ 0.48
AC025171.2-203ENST00000399543 MAGI1Q96QZ7 1491 aaPredicted RBP18.06■□□□□ 0.48
AC025171.2-203ENST00000399543 CFDP1Q9UEE9 299 aaPredicted RBP18.06■□□□□ 0.48
AC025171.2-203ENST00000399543 CROCC2H7BZ55 1655 aa18.05■□□□□ 0.48
AC025171.2-203ENST00000399543 ADGRL2O95490 1459 aa18.04■□□□□ 0.48
AC025171.2-203ENST00000399543 KIF7Q2M1P5 1343 aa18.04■□□□□ 0.48
AC025171.2-203ENST00000399543 SYNJ2O15056 1496 aa18.02■□□□□ 0.48
AC025171.2-203ENST00000399543 MBD5Q9P267 1494 aa18.02■□□□□ 0.48
AC025171.2-203ENST00000399543 RBM19Q9Y4C8 960 aaKnown RBP18.01■□□□□ 0.47
AC025171.2-203ENST00000399543 CHMP7Q8WUX9 453 aaPredicted RBP18■□□□□ 0.47
AC025171.2-203ENST00000399543 KIAA1107Q9UPP5 1409 aa18■□□□□ 0.47
AC025171.2-203ENST00000399543 ANP32EQ9BTT0 268 aa17.98■□□□□ 0.47
AC025171.2-203ENST00000399543 MRS2Q9HD23 443 aa17.98■□□□□ 0.47
AC025171.2-203ENST00000399543 ZNF777Q9ULD5 760 aaPredicted RBP17.98■□□□□ 0.47
AC025171.2-203ENST00000399543 IRX6P78412 446 aaPredicted RBP17.97■□□□□ 0.47
AC025171.2-203ENST00000399543 NUP160Q12769 1436 aa17.97■□□□□ 0.47
AC025171.2-203ENST00000399543 CARMIL2Q6F5E8 1435 aa17.97■□□□□ 0.47
AC025171.2-203ENST00000399543 CDC42BPAQ5VT25 1732 aa17.96■□□□□ 0.47
AC025171.2-203ENST00000399543 ANKRD30AQ9BXX3 1397 aa17.96■□□□□ 0.47
AC025171.2-203ENST00000399543 FAM9BQ8IZU0 186 aa17.96■□□□□ 0.47
AC025171.2-203ENST00000399543 ANKRD50Q9ULJ7 1429 aa17.95■□□□□ 0.46
AC025171.2-203ENST00000399543 BCORL1Q5H9F3 1711 aa17.95■□□□□ 0.46
AC025171.2-203ENST00000399543 JPH4Q96JJ6 628 aa17.94■□□□□ 0.46
AC025171.2-203ENST00000399543 ZBED9Q6R2W3 1325 aa17.94■□□□□ 0.46
AC025171.2-203ENST00000399543 PKD2Q13563 968 aa17.94■□□□□ 0.46
AC025171.2-203ENST00000399543 FBLN2P98095 1184 aa17.93■□□□□ 0.46
AC025171.2-203ENST00000399543 USP47Q96K76 1375 aa17.93■□□□□ 0.46
AC025171.2-203ENST00000399543 OSCARQ8IYS5 282 aa17.92■□□□□ 0.46
AC025171.2-203ENST00000399543 ABCA8O94911 1581 aa17.92■□□□□ 0.46
AC025171.2-203ENST00000399543 ABCC10Q5T3U5 1492 aa17.92■□□□□ 0.46
AC025171.2-203ENST00000399543 DHX29Q7Z478 1369 aaKnown RBP17.91■□□□□ 0.46
AC025171.2-203ENST00000399543 KDM5CP41229 1560 aa17.91■□□□□ 0.46
AC025171.2-203ENST00000399543 SHANK2Q9UPX8 1470 aa17.91■□□□□ 0.46
AC025171.2-203ENST00000399543 ERICH6BQ5W0A0 696 aa17.9■□□□□ 0.46
AC025171.2-203ENST00000399543 ATP10BO94823 1461 aa17.89■□□□□ 0.45
AC025171.2-203ENST00000399543 C9orf84Q5VXU9 1444 aa17.89■□□□□ 0.45
AC025171.2-203ENST00000399543 ZNF326Q5BKZ1 582 aaKnown RBP17.88■□□□□ 0.45
AC025171.2-203ENST00000399543 PLEKHD1A6NEE1 506 aa17.88■□□□□ 0.45
AC025171.2-203ENST00000399543 UHRF1BP1Q6BDS2 1440 aa17.87■□□□□ 0.45
AC025171.2-203ENST00000399543 NUP155O75694 1391 aa17.86■□□□□ 0.45
AC025171.2-203ENST00000399543 KDM5DQ9BY66 1539 aa17.86■□□□□ 0.45
AC025171.2-203ENST00000399543 RALGAPBQ86X10 1494 aa17.85■□□□□ 0.45
AC025171.2-203ENST00000399543 PPP4R2Q9NY27 417 aa17.84■□□□□ 0.45
AC025171.2-203ENST00000399543 ARHGEF12Q9NZN5 1544 aa17.84■□□□□ 0.45
AC025171.2-203ENST00000399543 ARID4BQ4LE39 1312 aaPredicted RBP17.84■□□□□ 0.45
AC025171.2-203ENST00000399543 PTPRGP23470 1445 aa17.81■□□□□ 0.44
AC025171.2-203ENST00000399543 POLR3GLQ9BT43 218 aa17.81■□□□□ 0.44
AC025171.2-203ENST00000399543 ARHGEF5Q12774 1597 aa17.8■□□□□ 0.44
AC025171.2-203ENST00000399543 KIF15Q9NS87 1388 aa17.8■□□□□ 0.44
AC025171.2-203ENST00000399543 TSPY4P0CV99 314 aa17.8■□□□□ 0.44
AC025171.2-203ENST00000399543 TSPY10P0CW01 314 aa17.8■□□□□ 0.44
AC025171.2-203ENST00000399543 CNGB1Q14028 1251 aaPredicted RBP17.78■□□□□ 0.44
AC025171.2-203ENST00000399543 ROCK2O75116 1388 aaKnown RBP17.78■□□□□ 0.44
AC025171.2-203ENST00000399543 HNRNPMP52272 730 aaKnown RBP eCLIP17.77■□□□□ 0.44
AC025171.2-203ENST00000399543 CARD11Q9BXL7 1154 aa17.77■□□□□ 0.44
AC025171.2-203ENST00000399543 SMG6Q86US8 1419 aaKnown RBP17.77■□□□□ 0.43
AC025171.2-203ENST00000399543 CDC42BPBQ9Y5S2 1711 aa17.76■□□□□ 0.43
AC025171.2-203ENST00000399543 SAMD9LQ8IVG5 1584 aa17.76■□□□□ 0.43
AC025171.2-203ENST00000399543 MSH5O43196 834 aa17.76■□□□□ 0.43
AC025171.2-203ENST00000399543 FANCIQ9NVI1 1328 aa17.75■□□□□ 0.43
AC025171.2-203ENST00000399543 B4GALNT3Q6L9W6 998 aa17.74■□□□□ 0.43
AC025171.2-203ENST00000399543 PREX2Q70Z35 1606 aa17.74■□□□□ 0.43
AC025171.2-203ENST00000399543 CCDC141Q6ZP82 1450 aa17.74■□□□□ 0.43
AC025171.2-203ENST00000399543 KDM2AQ9Y2K7 1162 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms