RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 TNIKQ9UKE5 1360 aa20.37■□□□□ 0.85
ITSN1-209ENST00000399352 HAP1P54257 671 aaPredicted RBP20.37■□□□□ 0.85
ITSN1-209ENST00000399352 EEA1Q15075 1411 aa20.37■□□□□ 0.85
ITSN1-209ENST00000399352 FOXD4L1Q9NU39 408 aa20.35■□□□□ 0.85
ITSN1-209ENST00000399352 CFAP44Q96MT7 982 aa20.34■□□□□ 0.85
ITSN1-209ENST00000399352 LMOD2Q6P5Q4 547 aa20.34■□□□□ 0.85
ITSN1-209ENST00000399352 SYAP1Q96A49 352 aaPredicted RBP20.34■□□□□ 0.85
ITSN1-209ENST00000399352 GNL2Q13823 731 aaKnown RBP20.33■□□□□ 0.85
ITSN1-209ENST00000399352 RWDD1Q9H446 243 aaPredicted RBP20.33■□□□□ 0.85
ITSN1-209ENST00000399352 KIAA1211Q6ZU35 1233 aa20.32■□□□□ 0.84
ITSN1-209ENST00000399352 MORC1Q86VD1 984 aa20.32■□□□□ 0.84
ITSN1-209ENST00000399352 ITPRIPQ8IWB1 547 aa20.32■□□□□ 0.84
ITSN1-209ENST00000399352 CALD1Q05682 793 aaKnown RBP20.32■□□□□ 0.84
ITSN1-209ENST00000399352 RSPH6AQ9H0K4 717 aa20.31■□□□□ 0.84
ITSN1-209ENST00000399352 CCNB3Q8WWL7 1395 aa20.31■□□□□ 0.84
ITSN1-209ENST00000399352 GOLGA2Q08379 1002 aa20.31■□□□□ 0.84
ITSN1-209ENST00000399352 CLSTN1O94985 981 aa20.3■□□□□ 0.84
ITSN1-209ENST00000399352 NCBP3Q53F19 620 aaKnown RBP20.29■□□□□ 0.84
ITSN1-209ENST00000399352 SOX12O15370 315 aa20.29■□□□□ 0.84
ITSN1-209ENST00000399352 TIMELESSQ9UNS1 1208 aa20.29■□□□□ 0.84
ITSN1-209ENST00000399352 IPO8O15397 1037 aaKnown RBP20.28■□□□□ 0.84
ITSN1-209ENST00000399352 KTN1Q86UP2 1357 aaKnown RBP20.27■□□□□ 0.84
ITSN1-209ENST00000399352 NOC3LQ8WTT2 800 aaKnown RBP20.27■□□□□ 0.83
ITSN1-209ENST00000399352 SLC4A3P48751 1232 aa20.26■□□□□ 0.83
ITSN1-209ENST00000399352 NPHP1O15259 732 aa20.25■□□□□ 0.83
ITSN1-209ENST00000399352 NOL8Q76FK4 1167 aaKnown RBP20.24■□□□□ 0.83
ITSN1-209ENST00000399352 GSE1Q14687 1217 aa20.23■□□□□ 0.83
ITSN1-209ENST00000399352 GOLGA6L1Q8N7Z2 621 aa20.23■□□□□ 0.83
ITSN1-209ENST00000399352 USP35Q9P2H5 1018 aa20.22■□□□□ 0.83
ITSN1-209ENST00000399352 CEP164Q9UPV0 1460 aa20.22■□□□□ 0.83
ITSN1-209ENST00000399352 HTATSF1O43719 755 aaKnown RBP20.21■□□□□ 0.83
ITSN1-209ENST00000399352 PMFBP1Q8TBY8 1022 aa20.21■□□□□ 0.83
ITSN1-209ENST00000399352 SAFB2Q14151 953 aaKnown RBP eCLIP20.21■□□□□ 0.83
ITSN1-209ENST00000399352 SRPK2P78362 688 aaKnown RBP20.2■□□□□ 0.83
ITSN1-209ENST00000399352 FOXD4L5Q5VV16 416 aaPredicted RBP20.2■□□□□ 0.83
ITSN1-209ENST00000399352 FOXD4L4Q8WXT5 416 aaPredicted RBP20.2■□□□□ 0.83
ITSN1-209ENST00000399352 CLUAP1Q96AJ1 413 aa20.2■□□□□ 0.82
ITSN1-209ENST00000399352 FOXD1Q16676 465 aa20.19■□□□□ 0.82
ITSN1-209ENST00000399352 U2AF1L5P0DN76 240 aaPredicted RBP20.18■□□□□ 0.82
ITSN1-209ENST00000399352 TPM4P67936 248 aa20.18■□□□□ 0.82
ITSN1-209ENST00000399352 U2AF1Q01081 240 aaKnown RBP eCLIP20.18■□□□□ 0.82
ITSN1-209ENST00000399352 ISY1Q9ULR0 285 aaKnown RBP20.18■□□□□ 0.82
ITSN1-209ENST00000399352 WRNQ14191 1432 aaPredicted RBP eCLIP20.18■□□□□ 0.82
ITSN1-209ENST00000399352 HSP90B1P14625 803 aaKnown RBP20.18■□□□□ 0.82
ITSN1-209ENST00000399352 RTF1Q92541 710 aaKnown RBP20.16■□□□□ 0.82
ITSN1-209ENST00000399352 SETD5Q9C0A6 1442 aa20.15■□□□□ 0.82
ITSN1-209ENST00000399352 RALBP1Q15311 655 aa20.15■□□□□ 0.82
ITSN1-209ENST00000399352 TRIM6-TRIM34B2RNG4 842 aa20.14■□□□□ 0.81
ITSN1-209ENST00000399352 PDE4AP27815 886 aa20.14■□□□□ 0.81
ITSN1-209ENST00000399352 DDX11L8A8MPP1 907 aa20.14■□□□□ 0.81
ITSN1-209ENST00000399352 SMC4Q9NTJ3 1288 aa20.13■□□□□ 0.81
ITSN1-209ENST00000399352 A0A0U1RQG5 324 aaPredicted RBP20.13■□□□□ 0.81
ITSN1-209ENST00000399352 PDE4CQ08493 712 aa20.12■□□□□ 0.81
ITSN1-209ENST00000399352 DDX49Q9Y6V7 483 aaKnown RBP20.11■□□□□ 0.81
ITSN1-209ENST00000399352 KIF27Q86VH2 1401 aa20.1■□□□□ 0.81
ITSN1-209ENST00000399352 CREBRFQ8IUR6 639 aa20.1■□□□□ 0.81
ITSN1-209ENST00000399352 PHF14O94880 888 aa20.09■□□□□ 0.81
ITSN1-209ENST00000399352 CCDC146Q8IYE0 955 aa20.09■□□□□ 0.81
ITSN1-209ENST00000399352 CSPP1Q1MSJ5 1256 aa20.09■□□□□ 0.81
ITSN1-209ENST00000399352 PKD2Q13563 968 aa20.08■□□□□ 0.8
ITSN1-209ENST00000399352 ZNF771Q7L3S4 317 aaPredicted RBP20.08■□□□□ 0.8
ITSN1-209ENST00000399352 FAM13BQ9NYF5 915 aa20.07■□□□□ 0.8
ITSN1-209ENST00000399352 FOXD4L6Q3SYB3 417 aaPredicted RBP20.06■□□□□ 0.8
ITSN1-209ENST00000399352 FOXD4L3Q6VB84 417 aaPredicted RBP20.06■□□□□ 0.8
ITSN1-209ENST00000399352 ST18O60284 1047 aa20.06■□□□□ 0.8
ITSN1-209ENST00000399352 CENPJQ9HC77 1338 aaPredicted RBP20.06■□□□□ 0.8
ITSN1-209ENST00000399352 FAM161AQ3B820 660 aa20.05■□□□□ 0.8
ITSN1-209ENST00000399352 CCAR2Q8N163 923 aaKnown RBP20.04■□□□□ 0.8
ITSN1-209ENST00000399352 STK26Q9P289 416 aa20.03■□□□□ 0.8
ITSN1-209ENST00000399352 PLIN1O60240 522 aa20.03■□□□□ 0.8
ITSN1-209ENST00000399352 TPM3P06753 285 aa20.03■□□□□ 0.8
ITSN1-209ENST00000399352 FANCIQ9NVI1 1328 aa20.03■□□□□ 0.8
ITSN1-209ENST00000399352 ROCK2O75116 1388 aaKnown RBP20.02■□□□□ 0.8
ITSN1-209ENST00000399352 RAB3GAP2Q9H2M9 1393 aa20.02■□□□□ 0.8
ITSN1-209ENST00000399352 KANK4Q5T7N3 995 aaPredicted RBP20.02■□□□□ 0.79
ITSN1-209ENST00000399352 EXOC6Q8TAG9 804 aa20.02■□□□□ 0.79
ITSN1-209ENST00000399352 PDE3BQ13370 1112 aa20.01■□□□□ 0.79
ITSN1-209ENST00000399352 CCDC34Q96HJ3 373 aa20.01■□□□□ 0.79
ITSN1-209ENST00000399352 SLC4A10Q6U841 1118 aa20.01■□□□□ 0.79
ITSN1-209ENST00000399352 HMMRO75330 724 aa20■□□□□ 0.79
ITSN1-209ENST00000399352 ZNF592Q92610 1267 aa20■□□□□ 0.79
ITSN1-209ENST00000399352 KIF16BQ96L93 1317 aa20■□□□□ 0.79
ITSN1-209ENST00000399352 SETQ01105 290 aaPredicted RBP19.99■□□□□ 0.79
ITSN1-209ENST00000399352 CENPQQ7L2Z9 268 aaPredicted RBP19.99■□□□□ 0.79
ITSN1-209ENST00000399352 HDGFL2Q7Z4V5 671 aaPredicted RBP19.99■□□□□ 0.79
ITSN1-209ENST00000399352 RASSF8Q8NHQ8 419 aa19.99■□□□□ 0.79
ITSN1-209ENST00000399352 SKOR2Q2VWA4 1001 aaPredicted RBP19.99■□□□□ 0.79
ITSN1-209ENST00000399352 NLRP13Q86W25 1043 aa19.98■□□□□ 0.79
ITSN1-209ENST00000399352 STK31Q9BXU1 1019 aa19.98■□□□□ 0.79
ITSN1-209ENST00000399352 ZNF330Q9Y3S2 320 aaPredicted RBP19.98■□□□□ 0.79
ITSN1-209ENST00000399352 SF3A1Q15459 793 aaKnown RBP19.97■□□□□ 0.79
ITSN1-209ENST00000399352 FHAD1B1AJZ9 1412 aa19.97■□□□□ 0.79
ITSN1-209ENST00000399352 GPATCH3Q96I76 525 aa19.96■□□□□ 0.79
ITSN1-209ENST00000399352 MPHOSPH9Q99550 1183 aa19.96■□□□□ 0.79
ITSN1-209ENST00000399352 GORABQ5T7V8 394 aa19.96■□□□□ 0.79
ITSN1-209ENST00000399352 GOLGA6L19H0YKK7 550 aa19.95■□□□□ 0.78
ITSN1-209ENST00000399352 BAZ1BQ9UIG0 1483 aaKnown RBP19.95■□□□□ 0.78
ITSN1-209ENST00000399352 BCL2L13Q9BXK5 485 aa19.94■□□□□ 0.78
ITSN1-209ENST00000399352 CHMP3Q9Y3E7 222 aa19.94■□□□□ 0.78
ITSN1-209ENST00000399352 CRBNQ96SW2 442 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms