RNA–Protein interactions for RNA: ENST00000399132.5

COL25A1-203, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL25A1, Length 2,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-203ENST00000399132 UACAQ9BZF9 1416 aa21.61■■□□□ 1.05
COL25A1-203ENST00000399132 ATP10BO94823 1461 aa21.59■■□□□ 1.05
COL25A1-203ENST00000399132 TONSLQ96HA7 1378 aa21.58■■□□□ 1.05
COL25A1-203ENST00000399132 DAPK1P53355 1430 aa21.58■■□□□ 1.05
COL25A1-203ENST00000399132 ABCC5O15440 1437 aa21.57■■□□□ 1.04
COL25A1-203ENST00000399132 ERCC6L2Q5T890 1561 aa21.56■■□□□ 1.04
COL25A1-203ENST00000399132 KCNH8Q96L42 1107 aa21.55■■□□□ 1.04
COL25A1-203ENST00000399132 PPP1R15AO75807 674 aaPredicted RBP21.55■■□□□ 1.04
COL25A1-203ENST00000399132 GPATCH8Q9UKJ3 1502 aaKnown RBP21.54■■□□□ 1.04
COL25A1-203ENST00000399132 MPHOSPH9Q99550 1183 aa21.54■■□□□ 1.04
COL25A1-203ENST00000399132 ABCA8O94911 1581 aa21.52■■□□□ 1.04
COL25A1-203ENST00000399132 CAMSAP2Q08AD1 1489 aa21.52■■□□□ 1.04
COL25A1-203ENST00000399132 HNRNPMP52272 730 aaKnown RBP eCLIP21.51■■□□□ 1.03
COL25A1-203ENST00000399132 PRKCSHP14314 528 aaPredicted RBP21.5■■□□□ 1.03
COL25A1-203ENST00000399132 DDX10Q13206 875 aaKnown RBP21.49■■□□□ 1.03
COL25A1-203ENST00000399132 SLC4A1APQ9BWU0 796 aaKnown RBP21.48■■□□□ 1.03
COL25A1-203ENST00000399132 CENPBP07199 599 aaPredicted RBP21.46■■□□□ 1.03
COL25A1-203ENST00000399132 DENND4BO75064 1496 aaPredicted RBP21.45■■□□□ 1.02
COL25A1-203ENST00000399132 DNMT1P26358 1616 aaKnown RBP21.44■■□□□ 1.02
COL25A1-203ENST00000399132 GCC2Q8IWJ2 1684 aa21.43■■□□□ 1.02
COL25A1-203ENST00000399132 AKNAQ7Z591 1439 aa21.41■■□□□ 1.02
COL25A1-203ENST00000399132 TIMELESSQ9UNS1 1208 aa21.41■■□□□ 1.02
COL25A1-203ENST00000399132 TSPY4P0CV99 314 aa21.38■■□□□ 1.01
COL25A1-203ENST00000399132 TSPY10P0CW01 314 aa21.38■■□□□ 1.01
COL25A1-203ENST00000399132 BCL11AQ9H165 835 aa21.38■■□□□ 1.01
COL25A1-203ENST00000399132 ROCK1Q13464 1354 aa21.38■■□□□ 1.01
COL25A1-203ENST00000399132 ITSN2Q9NZM3 1697 aa21.38■■□□□ 1.01
COL25A1-203ENST00000399132 NCOA1Q15788 1441 aa21.38■■□□□ 1.01
COL25A1-203ENST00000399132 ABCC10Q5T3U5 1492 aa21.38■■□□□ 1.01
COL25A1-203ENST00000399132 L3MBTL2Q969R5 705 aa21.36■■□□□ 1.01
COL25A1-203ENST00000399132 CDC42BPAQ5VT25 1732 aa21.36■■□□□ 1.01
COL25A1-203ENST00000399132 ADCY10Q96PN6 1610 aa21.35■■□□□ 1.01
COL25A1-203ENST00000399132 ANKRD30AQ9BXX3 1397 aa21.33■■□□□ 1
COL25A1-203ENST00000399132 ZNF326Q5BKZ1 582 aaKnown RBP21.32■■□□□ 1
COL25A1-203ENST00000399132 PKD2Q13563 968 aa21.31■■□□□ 1
COL25A1-203ENST00000399132 SHROOM2Q13796 1616 aa21.31■■□□□ 1
COL25A1-203ENST00000399132 C9orf84Q5VXU9 1444 aa21.3■■□□□ 1
COL25A1-203ENST00000399132 ANKRD50Q9ULJ7 1429 aa21.28■■□□□ 1
COL25A1-203ENST00000399132 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.27■■□□□ 1
COL25A1-203ENST00000399132 NUP155O75694 1391 aa21.26■□□□□ 0.99
COL25A1-203ENST00000399132 ANKRD30BQ9BXX2 1392 aa21.26■□□□□ 0.99
COL25A1-203ENST00000399132 ARHGAP5Q13017 1502 aa21.25■□□□□ 0.99
COL25A1-203ENST00000399132 ABCC2Q92887 1545 aa21.25■□□□□ 0.99
COL25A1-203ENST00000399132 TTC37Q6PGP7 1564 aa21.25■□□□□ 0.99
COL25A1-203ENST00000399132 KIF15Q9NS87 1388 aa21.24■□□□□ 0.99
COL25A1-203ENST00000399132 KDM5BQ9UGL1 1544 aa21.24■□□□□ 0.99
COL25A1-203ENST00000399132 CLASP1Q7Z460 1538 aa21.23■□□□□ 0.99
COL25A1-203ENST00000399132 PZPP20742 1482 aa21.23■□□□□ 0.99
COL25A1-203ENST00000399132 HSPA5P11021 654 aaKnown RBP21.23■□□□□ 0.99
COL25A1-203ENST00000399132 NBPF8Q3BBV2 869 aa21.23■□□□□ 0.99
COL25A1-203ENST00000399132 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.21■□□□□ 0.99
COL25A1-203ENST00000399132 SAMD9LQ8IVG5 1584 aa21.21■□□□□ 0.99
COL25A1-203ENST00000399132 CDC42BPBQ9Y5S2 1711 aa21.21■□□□□ 0.99
COL25A1-203ENST00000399132 CROCC2H7BZ55 1655 aa21.2■□□□□ 0.98
COL25A1-203ENST00000399132 ADGBQ8N7X0 1667 aa21.2■□□□□ 0.98
COL25A1-203ENST00000399132 MBD5Q9P267 1494 aa21.2■□□□□ 0.98
COL25A1-203ENST00000399132 SYCP2Q9BX26 1530 aa21.19■□□□□ 0.98
COL25A1-203ENST00000399132 ADGRL2O95490 1459 aa21.18■□□□□ 0.98
COL25A1-203ENST00000399132 KDM2AQ9Y2K7 1162 aa21.16■□□□□ 0.98
COL25A1-203ENST00000399132 ZCCHC11Q5TAX3 1644 aaKnown RBP21.15■□□□□ 0.98
COL25A1-203ENST00000399132 RPRD2Q5VT52 1461 aaKnown RBP21.15■□□□□ 0.98
COL25A1-203ENST00000399132 CCDC141Q6ZP82 1450 aa21.15■□□□□ 0.98
COL25A1-203ENST00000399132 PREX2Q70Z35 1606 aa21.15■□□□□ 0.98
COL25A1-203ENST00000399132 EIF4G2P78344 907 aaKnown RBP eCLIP21.14■□□□□ 0.98
COL25A1-203ENST00000399132 MYT1LQ9UL68 1186 aa21.14■□□□□ 0.98
COL25A1-203ENST00000399132 CNGB1Q14028 1251 aaPredicted RBP21.13■□□□□ 0.97
COL25A1-203ENST00000399132 KIAA1107Q9UPP5 1409 aa21.12■□□□□ 0.97
COL25A1-203ENST00000399132 AFAP1Q8N556 730 aa21.12■□□□□ 0.97
COL25A1-203ENST00000399132 OSCARQ8IYS5 282 aa21.12■□□□□ 0.97
COL25A1-203ENST00000399132 POLR3GLQ9BT43 218 aa21.12■□□□□ 0.97
COL25A1-203ENST00000399132 EFCAB2Q5VUJ9 269 aa21.11■□□□□ 0.97
COL25A1-203ENST00000399132 C11orf95C9JLR9 678 aaPredicted RBP21.1■□□□□ 0.97
COL25A1-203ENST00000399132 ANP32CO43423 234 aa21.1■□□□□ 0.97
COL25A1-203ENST00000399132 WASHC2AQ641Q2 1341 aa21.09■□□□□ 0.97
COL25A1-203ENST00000399132 SHANK2Q9UPX8 1470 aa21.09■□□□□ 0.97
COL25A1-203ENST00000399132 ARHGEF12Q9NZN5 1544 aa21.09■□□□□ 0.97
COL25A1-203ENST00000399132 RGL3Q3MIN7 710 aa21.08■□□□□ 0.96
COL25A1-203ENST00000399132 TEX14Q8IWB6 1497 aa21.08■□□□□ 0.96
COL25A1-203ENST00000399132 RSPH4AQ5TD94 716 aa21.06■□□□□ 0.96
COL25A1-203ENST00000399132 MYO5CQ9NQX4 1742 aa21.05■□□□□ 0.96
COL25A1-203ENST00000399132 ARHGEF5Q12774 1597 aa21.05■□□□□ 0.96
COL25A1-203ENST00000399132 PLCH2O75038 1416 aa21.04■□□□□ 0.96
COL25A1-203ENST00000399132 TRAPPC8Q9Y2L5 1435 aa21.04■□□□□ 0.96
COL25A1-203ENST00000399132 DCAF11Q8TEB1 546 aa21.04■□□□□ 0.96
COL25A1-203ENST00000399132 PLEKHH2Q8IVE3 1493 aa21.03■□□□□ 0.96
COL25A1-203ENST00000399132 UHRF1BP1LA0JNW5 1464 aa21.01■□□□□ 0.95
COL25A1-203ENST00000399132 SPAG9O60271 1321 aaKnown RBP20.99■□□□□ 0.95
COL25A1-203ENST00000399132 NPM1P06748 294 aaKnown RBP eCLIP20.98■□□□□ 0.95
COL25A1-203ENST00000399132 FAM135AQ9P2D6 1515 aa20.96■□□□□ 0.95
COL25A1-203ENST00000399132 WDR7Q9Y4E6 1490 aa20.96■□□□□ 0.95
COL25A1-203ENST00000399132 ASXL2Q76L83 1435 aa20.94■□□□□ 0.94
COL25A1-203ENST00000399132 CARD11Q9BXL7 1154 aa20.92■□□□□ 0.94
COL25A1-203ENST00000399132 ANP32EQ9BTT0 268 aa20.92■□□□□ 0.94
COL25A1-203ENST00000399132 KIF7Q2M1P5 1343 aa20.9■□□□□ 0.94
COL25A1-203ENST00000399132 FANCAO15360 1455 aa20.9■□□□□ 0.94
COL25A1-203ENST00000399132 CCDC7Q96M83 1385 aa20.89■□□□□ 0.94
COL25A1-203ENST00000399132 USP47Q96K76 1375 aa20.89■□□□□ 0.93
COL25A1-203ENST00000399132 ABCC1P33527 1531 aa20.89■□□□□ 0.93
COL25A1-203ENST00000399132 CCDC144AA2RUR9 1427 aa20.89■□□□□ 0.93
COL25A1-203ENST00000399132 SCAPERQ9BY12 1400 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms