RNA–Protein interactions for RNA: ENST00000398977.2

MSANTD3-204, Transcript of Myb/SANT DNA binding domain containing 3, human

TSL 3

Gene MSANTD3, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSANTD3-204	ENST00000398977	MAGI2	Q86UL8	1455 aa		41.16	■■■■■ 4.18
MSANTD3-204	ENST00000398977	LRRIQ1	Q96JM4	1722 aa		41.16	■■■■■ 4.18
MSANTD3-204	ENST00000398977	YEATS2	Q9ULM3	1422 aa		41.15	■■■■■ 4.18
MSANTD3-204	ENST00000398977	CLIP1	P30622	1438 aa		41.11	■■■■■ 4.17
MSANTD3-204	ENST00000398977	EFCAB2	Q5VUJ9	269 aa		41.1	■■■■■ 4.17
MSANTD3-204	ENST00000398977	PCF11	O94913	1555 aa	Known RBP	41.08	■■■■■ 4.17
MSANTD3-204	ENST00000398977	CASKIN1	Q8WXD9	1431 aa		41.07	■■■■■ 4.16
MSANTD3-204	ENST00000398977	SIGLEC1	Q9BZZ2	1709 aa		41.06	■■■■■ 4.16
MSANTD3-204	ENST00000398977	RIMS1	Q86UR5	1692 aa	Known RBP	41.05	■■■■■ 4.16
MSANTD3-204	ENST00000398977	CCDC18	Q5T9S5	1454 aa		41.02	■■■■■ 4.16
MSANTD3-204	ENST00000398977	ARHGAP5	Q13017	1502 aa		41.02	■■■■■ 4.16
MSANTD3-204	ENST00000398977	ILDR1	Q86SU0	546 aa	Predicted RBP	41	■■■■■ 4.15
MSANTD3-204	ENST00000398977	ZNF518A	Q6AHZ1	1483 aa		40.95	■■■■■ 4.15
MSANTD3-204	ENST00000398977	ATP10A	O60312	1499 aa		40.92	■■■■■ 4.14
MSANTD3-204	ENST00000398977	FYCO1	Q9BQS8	1478 aa		40.92	■■■■■ 4.14
MSANTD3-204	ENST00000398977	C9orf84	Q5VXU9	1444 aa		40.91	■■■■■ 4.14
MSANTD3-204	ENST00000398977	KDM5C	P41229	1560 aa		40.91	■■■■■ 4.14
MSANTD3-204	ENST00000398977	CDC42BPB	Q9Y5S2	1711 aa		40.9	■■■■■ 4.14
MSANTD3-204	ENST00000398977	LMTK3	Q96Q04	1460 aa		40.89	■■■■■ 4.14
MSANTD3-204	ENST00000398977	PREX2	Q70Z35	1606 aa		40.88	■■■■■ 4.13
MSANTD3-204	ENST00000398977	FER1L4	A9Z1Z3	1794 aa		40.84	■■■■■ 4.13
MSANTD3-204	ENST00000398977	MLEC	Q14165	292 aa		40.84	■■■■■ 4.13
MSANTD3-204	ENST00000398977	AFAP1	Q8N556	730 aa		40.82	■■■■■ 4.13
MSANTD3-204	ENST00000398977	ARHGEF12	Q9NZN5	1544 aa		40.8	■■■■■ 4.12
MSANTD3-204	ENST00000398977	ABCC1	P33527	1531 aa		40.78	■■■■■ 4.12
MSANTD3-204	ENST00000398977	DIP2C	Q9Y2E4	1556 aa		40.74	■■■■■ 4.11
MSANTD3-204	ENST00000398977	CDC42BPA	Q5VT25	1732 aa		40.74	■■■■■ 4.11
MSANTD3-204	ENST00000398977	PLPPR3	Q6T4P5	718 aa		40.74	■■■■■ 4.11
MSANTD3-204	ENST00000398977	MLH3	Q9UHC1	1453 aa		40.72	■■■■■ 4.11
MSANTD3-204	ENST00000398977	ITSN2	Q9NZM3	1697 aa		40.72	■■■■■ 4.11
MSANTD3-204	ENST00000398977	TRAPPC8	Q9Y2L5	1435 aa		40.7	■■■■■ 4.11
MSANTD3-204	ENST00000398977	RERE	Q9P2R6	1566 aa		40.69	■■■■■ 4.11
MSANTD3-204	ENST00000398977	ABCA6	Q8N139	1617 aa		40.68	■■■■■ 4.1
MSANTD3-204	ENST00000398977	MYT1L	Q9UL68	1186 aa		40.68	■■■■■ 4.1
MSANTD3-204	ENST00000398977	HSPA2	P54652	639 aa		40.61	■■■■■ 4.09
MSANTD3-204	ENST00000398977	GPATCH8	Q9UKJ3	1502 aa	Known RBP	40.58	■■■■■ 4.09
MSANTD3-204	ENST00000398977	SAMD9L	Q8IVG5	1584 aa		40.57	■■■■■ 4.09
MSANTD3-204	ENST00000398977	KIDINS220	Q9ULH0	1771 aa		40.56	■■■■■ 4.08
MSANTD3-204	ENST00000398977	AGL	P35573	1532 aa		40.55	■■■■■ 4.08
MSANTD3-204	ENST00000398977	ZNF777	Q9ULD5	760 aa	Predicted RBP	40.52	■■■■■ 4.08
MSANTD3-204	ENST00000398977	SYCP2	Q9BX26	1530 aa		40.52	■■■■■ 4.08
MSANTD3-204	ENST00000398977	PREX1	Q8TCU6	1659 aa		40.5	■■■■■ 4.07
MSANTD3-204	ENST00000398977	CEBPA	P49715	358 aa	Predicted RBP	40.49	■■■■■ 4.07
MSANTD3-204	ENST00000398977	MTUS2	Q5JR59	1369 aa		40.48	■■■■■ 4.07
MSANTD3-204	ENST00000398977	FBXO41	Q8TF61	875 aa		40.45	■■■■■ 4.07
MSANTD3-204	ENST00000398977	CCNB3	Q8WWL7	1395 aa		40.45	■■■■■ 4.07
MSANTD3-204	ENST00000398977	CEP162	Q5TB80	1403 aa		40.44	■■■■■ 4.06
MSANTD3-204	ENST00000398977	KIAA1107	Q9UPP5	1409 aa		40.42	■■■■■ 4.06
MSANTD3-204	ENST00000398977	CFDP1	Q9UEE9	299 aa	Predicted RBP	40.42	■■■■■ 4.06
MSANTD3-204	ENST00000398977	PLEKHH2	Q8IVE3	1493 aa		40.42	■■■■■ 4.06
MSANTD3-204	ENST00000398977	HNRNPM	P52272	730 aa	Known RBP eCLIP	40.39	■■■■■ 4.06
MSANTD3-204	ENST00000398977	EHBP1L1	Q8N3D4	1523 aa		40.38	■■■■■ 4.06
MSANTD3-204	ENST00000398977	SPAG9	O60271	1321 aa	Known RBP	40.38	■■■■■ 4.05
MSANTD3-204	ENST00000398977	C3	P01024	1663 aa		40.37	■■■■■ 4.05
MSANTD3-204	ENST00000398977	SETD1B	Q9UPS6	1966 aa	Known RBP	40.35	■■■■■ 4.05
MSANTD3-204	ENST00000398977	ATP7A	Q04656	1500 aa		40.34	■■■■■ 4.05
MSANTD3-204	ENST00000398977	UHRF1BP1	Q6BDS2	1440 aa		40.33	■■■■■ 4.05
MSANTD3-204	ENST00000398977	TIAM1	Q13009	1591 aa		40.33	■■■■■ 4.05
MSANTD3-204	ENST00000398977	INO80	Q9ULG1	1556 aa	Predicted RBP	40.33	■■■■■ 4.05
MSANTD3-204	ENST00000398977	ESF1	Q9H501	851 aa	Known RBP	40.33	■■■■■ 4.05
MSANTD3-204	ENST00000398977	CNTLN	Q9NXG0	1405 aa		40.3	■■■■■ 4.04
MSANTD3-204	ENST00000398977	PLXNC1	O60486	1568 aa		40.25	■■■■■ 4.03
MSANTD3-204	ENST00000398977	SUPT6H	Q7KZ85	1726 aa	Known RBP	40.24	■■■■■ 4.03
MSANTD3-204	ENST00000398977	A2M	P01023	1474 aa		40.2	■■■■■ 4.03
MSANTD3-204	ENST00000398977	ZNF644	Q9H582	1327 aa	Predicted RBP	40.19	■■■■■ 4.02
MSANTD3-204	ENST00000398977	MROH2A	A6NES4	1674 aa		40.19	■■■■■ 4.02
MSANTD3-204	ENST00000398977	STRC	Q7RTU9	1775 aa		40.18	■■■■■ 4.02
MSANTD3-204	ENST00000398977	MBD5	Q9P267	1494 aa		40.17	■■■■■ 4.02
MSANTD3-204	ENST00000398977	ADGB	Q8N7X0	1667 aa		40.12	■■■■■ 4.01
MSANTD3-204	ENST00000398977	NCOA2	Q15596	1464 aa		40.12	■■■■■ 4.01
MSANTD3-204	ENST00000398977	NPAT	Q14207	1427 aa		40.1	■■■■■ 4.01
MSANTD3-204	ENST00000398977	DMRT2	Q9Y5R5	561 aa		40.1	■■■■■ 4.01
MSANTD3-204	ENST00000398977	CERK	Q8TCT0	537 aa		40.09	■■■■■ 4.01
MSANTD3-204	ENST00000398977	ZMYM3	Q14202	1370 aa		40.08	■■■■■ 4.01
MSANTD3-204	ENST00000398977	CLTC	Q00610	1675 aa	Known RBP	40.06	■■■■■ 4
MSANTD3-204	ENST00000398977	RTEL1-TNFRSF6B	F6WH68	1400 aa		40.06	■■■■■ 4
MSANTD3-204	ENST00000398977	VPS8	Q8N3P4	1428 aa		40.02	■■■■■ 4
MSANTD3-204	ENST00000398977	CAMSAP2	Q08AD1	1489 aa		40.01	■■■■■ 4
MSANTD3-204	ENST00000398977	CCDC141	Q6ZP82	1450 aa		40	■■■■□ 3.99
MSANTD3-204	ENST00000398977	GGT6	Q6P531	493 aa		39.99	■■■■□ 3.99
MSANTD3-204	ENST00000398977	PTPRT	O14522	1441 aa		39.99	■■■■□ 3.99
MSANTD3-204	ENST00000398977	LOC105371045	A0A1W2PR82	267 aa		39.98	■■■■□ 3.99
MSANTD3-204	ENST00000398977	NCOA1	Q15788	1441 aa		39.96	■■■■□ 3.99
MSANTD3-204	ENST00000398977	PPP6R1	Q9UPN7	881 aa		39.95	■■■■□ 3.99
MSANTD3-204	ENST00000398977	DHX29	Q7Z478	1369 aa	Known RBP	39.93	■■■■□ 3.98
MSANTD3-204	ENST00000398977	LRRC9	Q6ZRR7	1453 aa		39.93	■■■■□ 3.98
MSANTD3-204	ENST00000398977	PTPRK	Q15262	1439 aa		39.92	■■■■□ 3.98
MSANTD3-204	ENST00000398977	MYO3A	Q8NEV4	1616 aa		39.9	■■■■□ 3.98
MSANTD3-204	ENST00000398977	RSPH4A	Q5TD94	716 aa		39.89	■■■■□ 3.98
MSANTD3-204	ENST00000398977	CAMSAP1	Q5T5Y3	1602 aa		39.88	■■■■□ 3.97
MSANTD3-204	ENST00000398977	ARHGEF5	Q12774	1597 aa		39.88	■■■■□ 3.97
MSANTD3-204	ENST00000398977	ZNF142	P52746	1687 aa	Predicted RBP	39.87	■■■■□ 3.97
MSANTD3-204	ENST00000398977	MAP3K1	Q13233	1512 aa		39.83	■■■■□ 3.97
MSANTD3-204	ENST00000398977	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	39.82	■■■■□ 3.97
MSANTD3-204	ENST00000398977	KIF3B	O15066	747 aa		39.78	■■■■□ 3.96
MSANTD3-204	ENST00000398977	FAM135A	Q9P2D6	1515 aa		39.78	■■■■□ 3.96
MSANTD3-204	ENST00000398977	PLA2R1	Q13018	1463 aa		39.75	■■■■□ 3.95
MSANTD3-204	ENST00000398977	KDM5D	Q9BY66	1539 aa		39.75	■■■■□ 3.95
MSANTD3-204	ENST00000398977	LTBP4	Q8N2S1	1624 aa		39.74	■■■■□ 3.95
MSANTD3-204	ENST00000398977	TSPY4	P0CV99	314 aa		39.73	■■■■□ 3.95

Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms