RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 CCNB3Q8WWL7 1395 aa39.68■■■■□ 3.94
TMEM55B-202ENST00000398020 ARAP3Q8WWN8 1544 aa39.67■■■■□ 3.94
TMEM55B-202ENST00000398020 GPATCH8Q9UKJ3 1502 aaKnown RBP39.67■■■■□ 3.94
TMEM55B-202ENST00000398020 CFAP74Q9C0B2 1584 aa39.66■■■■□ 3.94
TMEM55B-202ENST00000398020 AKNAQ7Z591 1439 aa39.65■■■■□ 3.94
TMEM55B-202ENST00000398020 EFCAB2Q5VUJ9 269 aa39.64■■■■□ 3.94
TMEM55B-202ENST00000398020 PHLDB1Q86UU1 1377 aa39.61■■■■□ 3.93
TMEM55B-202ENST00000398020 CFDP1Q9UEE9 299 aaPredicted RBP39.55■■■■□ 3.92
TMEM55B-202ENST00000398020 ZNF777Q9ULD5 760 aaPredicted RBP39.55■■■■□ 3.92
TMEM55B-202ENST00000398020 ADGRL1O94910 1474 aa39.55■■■■□ 3.92
TMEM55B-202ENST00000398020 ITSN2Q9NZM3 1697 aa39.54■■■■□ 3.92
TMEM55B-202ENST00000398020 PPARGC1BQ86YN6 1023 aaKnown RBP39.53■■■■□ 3.92
TMEM55B-202ENST00000398020 RAPGEF3O95398 923 aa39.52■■■■□ 3.92
TMEM55B-202ENST00000398020 SCAPERQ9BY12 1400 aa39.5■■■■□ 3.91
TMEM55B-202ENST00000398020 DENND4BO75064 1496 aaPredicted RBP39.47■■■■□ 3.91
TMEM55B-202ENST00000398020 SAMD9LQ8IVG5 1584 aa39.46■■■■□ 3.91
TMEM55B-202ENST00000398020 FRMPD1Q5SYB0 1578 aa39.44■■■■□ 3.9
TMEM55B-202ENST00000398020 ABCC1P33527 1531 aa39.43■■■■□ 3.9
TMEM55B-202ENST00000398020 ZNF644Q9H582 1327 aaPredicted RBP39.42■■■■□ 3.9
TMEM55B-202ENST00000398020 RICTORQ6R327 1708 aa39.41■■■■□ 3.9
TMEM55B-202ENST00000398020 MYOM3Q5VTT5 1437 aa39.4■■■■□ 3.9
TMEM55B-202ENST00000398020 ARHGEF12Q9NZN5 1544 aa39.39■■■■□ 3.9
TMEM55B-202ENST00000398020 POGZQ7Z3K3 1410 aa39.37■■■■□ 3.89
TMEM55B-202ENST00000398020 SYCP2Q9BX26 1530 aa39.36■■■■□ 3.89
TMEM55B-202ENST00000398020 HNRNPMP52272 730 aaKnown RBP eCLIP39.33■■■■□ 3.89
TMEM55B-202ENST00000398020 AFAP1Q8N556 730 aa39.32■■■■□ 3.89
TMEM55B-202ENST00000398020 TRAPPC8Q9Y2L5 1435 aa39.31■■■■□ 3.88
TMEM55B-202ENST00000398020 CAMSAP2Q08AD1 1489 aa39.31■■■■□ 3.88
TMEM55B-202ENST00000398020 PLEKHH2Q8IVE3 1493 aa39.29■■■■□ 3.88
TMEM55B-202ENST00000398020 ZNF518AQ6AHZ1 1483 aa39.28■■■■□ 3.88
TMEM55B-202ENST00000398020 MIA2Q96PC5 1412 aa39.27■■■■□ 3.88
TMEM55B-202ENST00000398020 KIAA1107Q9UPP5 1409 aa39.26■■■■□ 3.88
TMEM55B-202ENST00000398020 ZMYM4Q5VZL5 1548 aa39.23■■■■□ 3.87
TMEM55B-202ENST00000398020 FGD6Q6ZV73 1430 aa39.22■■■■□ 3.87
TMEM55B-202ENST00000398020 KDM5CP41229 1560 aa39.21■■■■□ 3.87
TMEM55B-202ENST00000398020 MBD5Q9P267 1494 aa39.2■■■■□ 3.87
TMEM55B-202ENST00000398020 PTPN23Q9H3S7 1636 aa39.18■■■■□ 3.86
TMEM55B-202ENST00000398020 MYT1LQ9UL68 1186 aa39.16■■■■□ 3.86
TMEM55B-202ENST00000398020 YEATS2Q9ULM3 1422 aa39.15■■■■□ 3.86
TMEM55B-202ENST00000398020 ZFYVE16Q7Z3T8 1539 aa39.13■■■■□ 3.85
TMEM55B-202ENST00000398020 HECW2Q9P2P5 1572 aa39.12■■■■□ 3.85
TMEM55B-202ENST00000398020 MAGI2Q86UL8 1455 aa39.11■■■■□ 3.85
TMEM55B-202ENST00000398020 ARHGEF40Q8TER5 1519 aa39.11■■■■□ 3.85
TMEM55B-202ENST00000398020 TCOF1Q13428 1488 aaKnown RBP39.08■■■■□ 3.85
TMEM55B-202ENST00000398020 CCDC141Q6ZP82 1450 aa39.08■■■■□ 3.85
TMEM55B-202ENST00000398020 SPAG9O60271 1321 aaKnown RBP39.08■■■■□ 3.85
TMEM55B-202ENST00000398020 MLH3Q9UHC1 1453 aa39.07■■■■□ 3.85
TMEM55B-202ENST00000398020 ARHGEF5Q12774 1597 aa39.06■■■■□ 3.84
TMEM55B-202ENST00000398020 KIDINS220Q9ULH0 1771 aa39.04■■■■□ 3.84
TMEM55B-202ENST00000398020 FAM50AQ14320 339 aaKnown RBP39.03■■■■□ 3.84
TMEM55B-202ENST00000398020 RSPH4AQ5TD94 716 aa39.01■■■■□ 3.84
TMEM55B-202ENST00000398020 ABCA6Q8N139 1617 aa39■■■■□ 3.83
TMEM55B-202ENST00000398020 INO80Q9ULG1 1556 aaPredicted RBP39■■■■□ 3.83
TMEM55B-202ENST00000398020 ATP7AQ04656 1500 aa39■■■■□ 3.83
TMEM55B-202ENST00000398020 DIP2CQ9Y2E4 1556 aa38.98■■■■□ 3.83
TMEM55B-202ENST00000398020 ATP10AO60312 1499 aa38.95■■■■□ 3.83
TMEM55B-202ENST00000398020 TSPY4P0CV99 314 aa38.94■■■■□ 3.82
TMEM55B-202ENST00000398020 TSPY10P0CW01 314 aa38.94■■■■□ 3.82
TMEM55B-202ENST00000398020 DNMT1P26358 1616 aaKnown RBP38.92■■■■□ 3.82
TMEM55B-202ENST00000398020 ABCC5O15440 1437 aa38.92■■■■□ 3.82
TMEM55B-202ENST00000398020 SIGLEC1Q9BZZ2 1709 aa38.91■■■■□ 3.82
TMEM55B-202ENST00000398020 DAPK1P53355 1430 aa38.9■■■■□ 3.82
TMEM55B-202ENST00000398020 C9orf84Q5VXU9 1444 aa38.89■■■■□ 3.82
TMEM55B-202ENST00000398020 ARID4BQ4LE39 1312 aaPredicted RBP38.89■■■■□ 3.82
TMEM55B-202ENST00000398020 RTEL1-TNFRSF6BF6WH68 1400 aa38.88■■■■□ 3.81
TMEM55B-202ENST00000398020 CROCC2H7BZ55 1655 aa38.88■■■■□ 3.81
TMEM55B-202ENST00000398020 RRBP1Q9P2E9 1410 aaKnown RBP38.83■■■■□ 3.81
TMEM55B-202ENST00000398020 MAST1Q9Y2H9 1570 aa38.83■■■■□ 3.81
TMEM55B-202ENST00000398020 CHIC2Q9UKJ5 165 aa38.8■■■■□ 3.8
TMEM55B-202ENST00000398020 SHANK2Q9UPX8 1470 aa38.79■■■■□ 3.8
TMEM55B-202ENST00000398020 ADGBQ8N7X0 1667 aa38.78■■■■□ 3.8
TMEM55B-202ENST00000398020 REREQ9P2R6 1566 aa38.78■■■■□ 3.8
TMEM55B-202ENST00000398020 ITGAEP38570 1179 aa38.77■■■■□ 3.8
TMEM55B-202ENST00000398020 A2MP01023 1474 aa38.76■■■■□ 3.8
TMEM55B-202ENST00000398020 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.75■■■■□ 3.79
TMEM55B-202ENST00000398020 MLECQ14165 292 aa38.72■■■■□ 3.79
TMEM55B-202ENST00000398020 PTPRKQ15262 1439 aa38.72■■■■□ 3.79
TMEM55B-202ENST00000398020 KDM4FA0A1W2PPD8 638 aa38.71■■■■□ 3.79
TMEM55B-202ENST00000398020 PLXNC1O60486 1568 aa38.7■■■■□ 3.79
TMEM55B-202ENST00000398020 BCORL1Q5H9F3 1711 aa38.69■■■■□ 3.78
TMEM55B-202ENST00000398020 RRP7BPQ9NSQ0 103 aa38.68■■■■□ 3.78
TMEM55B-202ENST00000398020 DHX29Q7Z478 1369 aaKnown RBP38.67■■■■□ 3.78
TMEM55B-202ENST00000398020 AGLP35573 1532 aa38.66■■■■□ 3.78
TMEM55B-202ENST00000398020 KIF15Q9NS87 1388 aa38.64■■■■□ 3.78
TMEM55B-202ENST00000398020 ANKRD30AQ9BXX3 1397 aa38.63■■■■□ 3.77
TMEM55B-202ENST00000398020 NCOA1Q15788 1441 aa38.61■■■■□ 3.77
TMEM55B-202ENST00000398020 ADGRL2O95490 1459 aa38.6■■■■□ 3.77
TMEM55B-202ENST00000398020 ADAMTSL3P82987 1691 aa38.59■■■■□ 3.77
TMEM55B-202ENST00000398020 DUOX2Q9NRD8 1548 aa38.57■■■■□ 3.76
TMEM55B-202ENST00000398020 MADDQ8WXG6 1647 aa38.55■■■■□ 3.76
TMEM55B-202ENST00000398020 KIF3BO15066 747 aa38.54■■■■□ 3.76
TMEM55B-202ENST00000398020 GGT6Q6P531 493 aa38.52■■■■□ 3.76
TMEM55B-202ENST00000398020 FER1L4A9Z1Z3 1794 aa38.48■■■■□ 3.75
TMEM55B-202ENST00000398020 ROCK1Q13464 1354 aa38.48■■■■□ 3.75
TMEM55B-202ENST00000398020 RIMS1Q86UR5 1692 aaKnown RBP38.46■■■■□ 3.75
TMEM55B-202ENST00000398020 ERBINQ96RT1 1412 aa38.45■■■■□ 3.75
TMEM55B-202ENST00000398020 EIF2AK4Q9P2K8 1649 aaKnown RBP38.44■■■■□ 3.74
TMEM55B-202ENST00000398020 ANKRD50Q9ULJ7 1429 aa38.39■■■■□ 3.74
TMEM55B-202ENST00000398020 ESF1Q9H501 851 aaKnown RBP38.37■■■■□ 3.73
TMEM55B-202ENST00000398020 PTPRMP28827 1452 aa38.36■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms