RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 CAMSAP2Q08AD1 1489 aa29.46■■■□□ 2.31
PDLIM2-205ENST00000397761 DNMT1P26358 1616 aaKnown RBP29.46■■■□□ 2.31
PDLIM2-205ENST00000397761 CFDP1Q9UEE9 299 aaPredicted RBP29.44■■■□□ 2.3
PDLIM2-205ENST00000397761 KCNH8Q96L42 1107 aa29.42■■■□□ 2.3
PDLIM2-205ENST00000397761 PLCH2O75038 1416 aa29.41■■■□□ 2.3
PDLIM2-205ENST00000397761 SAMD9LQ8IVG5 1584 aa29.4■■■□□ 2.3
PDLIM2-205ENST00000397761 CROCC2H7BZ55 1655 aa29.39■■■□□ 2.3
PDLIM2-205ENST00000397761 PTPRKQ15262 1439 aa29.37■■■□□ 2.29
PDLIM2-205ENST00000397761 ARHGAP5Q13017 1502 aa29.37■■■□□ 2.29
PDLIM2-205ENST00000397761 ZNF644Q9H582 1327 aaPredicted RBP29.37■■■□□ 2.29
PDLIM2-205ENST00000397761 ARHGEF5Q12774 1597 aa29.35■■■□□ 2.29
PDLIM2-205ENST00000397761 DAPK1P53355 1430 aa29.34■■■□□ 2.29
PDLIM2-205ENST00000397761 ITGAEP38570 1179 aa29.33■■■□□ 2.29
PDLIM2-205ENST00000397761 GLI2P10070 1586 aa29.31■■■□□ 2.28
PDLIM2-205ENST00000397761 ABCC5O15440 1437 aa29.31■■■□□ 2.28
PDLIM2-205ENST00000397761 PLEKHH2Q8IVE3 1493 aa29.29■■■□□ 2.28
PDLIM2-205ENST00000397761 AKNAQ7Z591 1439 aa29.29■■■□□ 2.28
PDLIM2-205ENST00000397761 ADGBQ8N7X0 1667 aa29.29■■■□□ 2.28
PDLIM2-205ENST00000397761 MBD5Q9P267 1494 aa29.28■■■□□ 2.28
PDLIM2-205ENST00000397761 GCC2Q8IWJ2 1684 aa29.27■■■□□ 2.28
PDLIM2-205ENST00000397761 KIAA1107Q9UPP5 1409 aa29.27■■■□□ 2.28
PDLIM2-205ENST00000397761 MAP3K4Q9Y6R4 1608 aa29.27■■■□□ 2.28
PDLIM2-205ENST00000397761 ZNF777Q9ULD5 760 aaPredicted RBP29.25■■■□□ 2.27
PDLIM2-205ENST00000397761 ABCC1P33527 1531 aa29.25■■■□□ 2.27
PDLIM2-205ENST00000397761 SHANK2Q9UPX8 1470 aa29.25■■■□□ 2.27
PDLIM2-205ENST00000397761 HFM1A2PYH4 1435 aa29.24■■■□□ 2.27
PDLIM2-205ENST00000397761 DIP2BQ9P265 1576 aa29.24■■■□□ 2.27
PDLIM2-205ENST00000397761 KIF13AQ9H1H9 1805 aa29.23■■■□□ 2.27
PDLIM2-205ENST00000397761 SETD5Q9C0A6 1442 aa29.23■■■□□ 2.27
PDLIM2-205ENST00000397761 SYCP2Q9BX26 1530 aa29.23■■■□□ 2.27
PDLIM2-205ENST00000397761 EFCAB2Q5VUJ9 269 aa29.23■■■□□ 2.27
PDLIM2-205ENST00000397761 ROCK1Q13464 1354 aa29.22■■■□□ 2.27
PDLIM2-205ENST00000397761 CFAP74Q9C0B2 1584 aa29.21■■■□□ 2.27
PDLIM2-205ENST00000397761 ADGRL2O95490 1459 aa29.2■■■□□ 2.27
PDLIM2-205ENST00000397761 FANCAO15360 1455 aa29.19■■■□□ 2.26
PDLIM2-205ENST00000397761 CCDC141Q6ZP82 1450 aa29.19■■■□□ 2.26
PDLIM2-205ENST00000397761 NAIPQ13075 1403 aa29.18■■■□□ 2.26
PDLIM2-205ENST00000397761 CD109Q6YHK3 1445 aa29.18■■■□□ 2.26
PDLIM2-205ENST00000397761 ARHGEF12Q9NZN5 1544 aa29.18■■■□□ 2.26
PDLIM2-205ENST00000397761 MAST1Q9Y2H9 1570 aa29.17■■■□□ 2.26
PDLIM2-205ENST00000397761 RSPH4AQ5TD94 716 aa29.17■■■□□ 2.26
PDLIM2-205ENST00000397761 RAB3GAP2Q9H2M9 1393 aa29.15■■■□□ 2.26
PDLIM2-205ENST00000397761 HRCP23327 699 aa29.14■■■□□ 2.26
PDLIM2-205ENST00000397761 HNRNPMP52272 730 aaKnown RBP eCLIP29.11■■■□□ 2.25
PDLIM2-205ENST00000397761 C9orf84Q5VXU9 1444 aa29.1■■■□□ 2.25
PDLIM2-205ENST00000397761 NCOA1Q15788 1441 aa29.1■■■□□ 2.25
PDLIM2-205ENST00000397761 CHIC2Q9UKJ5 165 aa29.09■■■□□ 2.25
PDLIM2-205ENST00000397761 NEO1Q92859 1461 aa29.07■■■□□ 2.24
PDLIM2-205ENST00000397761 PPRC1Q5VV67 1664 aaKnown RBP29.07■■■□□ 2.24
PDLIM2-205ENST00000397761 ADGRL1O94910 1474 aa29.06■■■□□ 2.24
PDLIM2-205ENST00000397761 PLXNC1O60486 1568 aa29.05■■■□□ 2.24
PDLIM2-205ENST00000397761 KDM6BO15054 1643 aa29.03■■■□□ 2.24
PDLIM2-205ENST00000397761 ANKRD30AQ9BXX3 1397 aa29.03■■■□□ 2.24
PDLIM2-205ENST00000397761 TRAPPC8Q9Y2L5 1435 aa29.03■■■□□ 2.24
PDLIM2-205ENST00000397761 TSPY4P0CV99 314 aa29.02■■■□□ 2.24
PDLIM2-205ENST00000397761 TSPY10P0CW01 314 aa29.02■■■□□ 2.24
PDLIM2-205ENST00000397761 RRP7BPQ9NSQ0 103 aa29.02■■■□□ 2.24
PDLIM2-205ENST00000397761 FAM69CQ0P6D2 419 aa29■■■□□ 2.23
PDLIM2-205ENST00000397761 TSPOAP1O95153 1857 aa28.99■■■□□ 2.23
PDLIM2-205ENST00000397761 SCAPERQ9BY12 1400 aa28.99■■■□□ 2.23
PDLIM2-205ENST00000397761 INO80Q9ULG1 1556 aaPredicted RBP28.98■■■□□ 2.23
PDLIM2-205ENST00000397761 DHX57Q6P158 1386 aaKnown RBP28.98■■■□□ 2.23
PDLIM2-205ENST00000397761 ZFYVE16Q7Z3T8 1539 aa28.96■■■□□ 2.23
PDLIM2-205ENST00000397761 CCER1Q8TC90 406 aaPredicted RBP28.96■■■□□ 2.23
PDLIM2-205ENST00000397761 RTEL1-TNFRSF6BF6WH68 1400 aa28.96■■■□□ 2.23
PDLIM2-205ENST00000397761 KDM5CP41229 1560 aa28.95■■■□□ 2.22
PDLIM2-205ENST00000397761 ZNF518AQ6AHZ1 1483 aa28.92■■■□□ 2.22
PDLIM2-205ENST00000397761 ACIN1Q9UKV3 1341 aaKnown RBP28.92■■■□□ 2.22
PDLIM2-205ENST00000397761 RICTORQ6R327 1708 aa28.92■■■□□ 2.22
PDLIM2-205ENST00000397761 POGZQ7Z3K3 1410 aa28.91■■■□□ 2.22
PDLIM2-205ENST00000397761 TEX14Q8IWB6 1497 aa28.91■■■□□ 2.22
PDLIM2-205ENST00000397761 KIF15Q9NS87 1388 aa28.9■■■□□ 2.22
PDLIM2-205ENST00000397761 ATP7AQ04656 1500 aa28.9■■■□□ 2.22
PDLIM2-205ENST00000397761 ANKRD50Q9ULJ7 1429 aa28.89■■■□□ 2.21
PDLIM2-205ENST00000397761 KIDINS220Q9ULH0 1771 aa28.88■■■□□ 2.21
PDLIM2-205ENST00000397761 AFAP1Q8N556 730 aa28.88■■■□□ 2.21
PDLIM2-205ENST00000397761 DUOX2Q9NRD8 1548 aa28.86■■■□□ 2.21
PDLIM2-205ENST00000397761 CLSPNQ9HAW4 1339 aa28.86■■■□□ 2.21
PDLIM2-205ENST00000397761 SPAG9O60271 1321 aaKnown RBP28.85■■■□□ 2.21
PDLIM2-205ENST00000397761 DENND4BO75064 1496 aaPredicted RBP28.84■■■□□ 2.21
PDLIM2-205ENST00000397761 HECW2Q9P2P5 1572 aa28.83■■■□□ 2.21
PDLIM2-205ENST00000397761 MLH3Q9UHC1 1453 aa28.82■■■□□ 2.2
PDLIM2-205ENST00000397761 ZEB1P37275 1124 aaPredicted RBP28.81■■■□□ 2.2
PDLIM2-205ENST00000397761 FRMPD1Q5SYB0 1578 aa28.81■■■□□ 2.2
PDLIM2-205ENST00000397761 ERBINQ96RT1 1412 aa28.78■■■□□ 2.2
PDLIM2-205ENST00000397761 UNC13BO14795 1591 aa28.77■■■□□ 2.2
PDLIM2-205ENST00000397761 KDM5DQ9BY66 1539 aa28.77■■■□□ 2.2
PDLIM2-205ENST00000397761 ZMYM4Q5VZL5 1548 aa28.76■■■□□ 2.2
PDLIM2-205ENST00000397761 EIF2AK4Q9P2K8 1649 aaKnown RBP28.74■■■□□ 2.19
PDLIM2-205ENST00000397761 ABCA6Q8N139 1617 aa28.72■■■□□ 2.19
PDLIM2-205ENST00000397761 PZPP20742 1482 aa28.7■■■□□ 2.18
PDLIM2-205ENST00000397761 MAGI2Q86UL8 1455 aa28.7■■■□□ 2.18
PDLIM2-205ENST00000397761 DEPDC5O75140 1603 aa28.7■■■□□ 2.18
PDLIM2-205ENST00000397761 BCORL1Q5H9F3 1711 aa28.68■■■□□ 2.18
PDLIM2-205ENST00000397761 RAPGEF3O95398 923 aa28.66■■■□□ 2.18
PDLIM2-205ENST00000397761 DIP2CQ9Y2E4 1556 aa28.66■■■□□ 2.18
PDLIM2-205ENST00000397761 TRIM52Q96A61 297 aa28.66■■■□□ 2.18
PDLIM2-205ENST00000397761 IQGAP3Q86VI3 1631 aa28.65■■■□□ 2.18
PDLIM2-205ENST00000397761 DHX29Q7Z478 1369 aaKnown RBP28.65■■■□□ 2.18
PDLIM2-205ENST00000397761 MPHOSPH9Q99550 1183 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms