RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 CDC42BPBQ9Y5S2 1711 aa39.77■■■■□ 3.96
TSPAN4-207ENST00000397411 ADGRL1O94910 1474 aa39.76■■■■□ 3.96
TSPAN4-207ENST00000397411 MAP3K1Q13233 1512 aa39.75■■■■□ 3.95
TSPAN4-207ENST00000397411 ZNF777Q9ULD5 760 aaPredicted RBP39.75■■■■□ 3.95
TSPAN4-207ENST00000397411 PREX2Q70Z35 1606 aa39.75■■■■□ 3.95
TSPAN4-207ENST00000397411 SCAPERQ9BY12 1400 aa39.74■■■■□ 3.95
TSPAN4-207ENST00000397411 CDC42BPAQ5VT25 1732 aa39.74■■■■□ 3.95
TSPAN4-207ENST00000397411 LRRC9Q6ZRR7 1453 aa39.72■■■■□ 3.95
TSPAN4-207ENST00000397411 CFDP1Q9UEE9 299 aaPredicted RBP39.71■■■■□ 3.95
TSPAN4-207ENST00000397411 SUPT6HQ7KZ85 1726 aaKnown RBP39.71■■■■□ 3.95
TSPAN4-207ENST00000397411 GPATCH8Q9UKJ3 1502 aaKnown RBP39.7■■■■□ 3.95
TSPAN4-207ENST00000397411 KANK4Q5T7N3 995 aaPredicted RBP39.7■■■■□ 3.95
TSPAN4-207ENST00000397411 NCOA2Q15596 1464 aa39.63■■■■□ 3.94
TSPAN4-207ENST00000397411 RICTORQ6R327 1708 aa39.61■■■■□ 3.93
TSPAN4-207ENST00000397411 FRMPD1Q5SYB0 1578 aa39.59■■■■□ 3.93
TSPAN4-207ENST00000397411 MYT1LQ9UL68 1186 aa39.59■■■■□ 3.93
TSPAN4-207ENST00000397411 ITSN2Q9NZM3 1697 aa39.57■■■■□ 3.93
TSPAN4-207ENST00000397411 POGZQ7Z3K3 1410 aa39.57■■■■□ 3.92
TSPAN4-207ENST00000397411 AFAP1Q8N556 730 aa39.54■■■■□ 3.92
TSPAN4-207ENST00000397411 HNRNPMP52272 730 aaKnown RBP eCLIP39.5■■■■□ 3.91
TSPAN4-207ENST00000397411 ABCC1P33527 1531 aa39.5■■■■□ 3.91
TSPAN4-207ENST00000397411 ZNF518AQ6AHZ1 1483 aa39.49■■■■□ 3.91
TSPAN4-207ENST00000397411 SAMD9LQ8IVG5 1584 aa39.48■■■■□ 3.91
TSPAN4-207ENST00000397411 PLEKHH2Q8IVE3 1493 aa39.48■■■■□ 3.91
TSPAN4-207ENST00000397411 ZMYM4Q5VZL5 1548 aa39.45■■■■□ 3.91
TSPAN4-207ENST00000397411 ARHGEF12Q9NZN5 1544 aa39.45■■■■□ 3.91
TSPAN4-207ENST00000397411 ZNF644Q9H582 1327 aaPredicted RBP39.44■■■■□ 3.9
TSPAN4-207ENST00000397411 MAGI2Q86UL8 1455 aa39.44■■■■□ 3.9
TSPAN4-207ENST00000397411 TRAPPC8Q9Y2L5 1435 aa39.43■■■■□ 3.9
TSPAN4-207ENST00000397411 ZFYVE16Q7Z3T8 1539 aa39.4■■■■□ 3.9
TSPAN4-207ENST00000397411 SYCP2Q9BX26 1530 aa39.4■■■■□ 3.9
TSPAN4-207ENST00000397411 KIAA1107Q9UPP5 1409 aa39.4■■■■□ 3.9
TSPAN4-207ENST00000397411 ARID4BQ4LE39 1312 aaPredicted RBP39.4■■■■□ 3.9
TSPAN4-207ENST00000397411 AEBP2Q6ZN18 517 aaPredicted RBP39.39■■■■□ 3.9
TSPAN4-207ENST00000397411 ARHGEF40Q8TER5 1519 aa39.35■■■■□ 3.89
TSPAN4-207ENST00000397411 YEATS2Q9ULM3 1422 aa39.35■■■■□ 3.89
TSPAN4-207ENST00000397411 KDM5CP41229 1560 aa39.33■■■■□ 3.89
TSPAN4-207ENST00000397411 MYOM3Q5VTT5 1437 aa39.33■■■■□ 3.89
TSPAN4-207ENST00000397411 SPAG9O60271 1321 aaKnown RBP39.31■■■■□ 3.88
TSPAN4-207ENST00000397411 KDM4FA0A1W2PPD8 638 aa39.3■■■■□ 3.88
TSPAN4-207ENST00000397411 CAMSAP2Q08AD1 1489 aa39.3■■■■□ 3.88
TSPAN4-207ENST00000397411 HECW2Q9P2P5 1572 aa39.29■■■■□ 3.88
TSPAN4-207ENST00000397411 MLH3Q9UHC1 1453 aa39.27■■■■□ 3.88
TSPAN4-207ENST00000397411 ATP10AO60312 1499 aa39.26■■■■□ 3.88
TSPAN4-207ENST00000397411 MIA2Q96PC5 1412 aa39.26■■■■□ 3.88
TSPAN4-207ENST00000397411 RSPH4AQ5TD94 716 aa39.26■■■■□ 3.88
TSPAN4-207ENST00000397411 PPARGC1BQ86YN6 1023 aaKnown RBP39.25■■■■□ 3.87
TSPAN4-207ENST00000397411 MBD5Q9P267 1494 aa39.2■■■■□ 3.87
TSPAN4-207ENST00000397411 C9orf84Q5VXU9 1444 aa39.18■■■■□ 3.86
TSPAN4-207ENST00000397411 TSPY4P0CV99 314 aa39.17■■■■□ 3.86
TSPAN4-207ENST00000397411 TSPY10P0CW01 314 aa39.17■■■■□ 3.86
TSPAN4-207ENST00000397411 KIDINS220Q9ULH0 1771 aa39.16■■■■□ 3.86
TSPAN4-207ENST00000397411 CCDC141Q6ZP82 1450 aa39.14■■■■□ 3.86
TSPAN4-207ENST00000397411 DIP2CQ9Y2E4 1556 aa39.13■■■■□ 3.85
TSPAN4-207ENST00000397411 MLECQ14165 292 aa39.13■■■■□ 3.85
TSPAN4-207ENST00000397411 ABCA6Q8N139 1617 aa39.11■■■■□ 3.85
TSPAN4-207ENST00000397411 ATP7AQ04656 1500 aa39.11■■■■□ 3.85
TSPAN4-207ENST00000397411 FGD6Q6ZV73 1430 aa39.11■■■■□ 3.85
TSPAN4-207ENST00000397411 PTPN23Q9H3S7 1636 aa39.1■■■■□ 3.85
TSPAN4-207ENST00000397411 ARHGEF5Q12774 1597 aa39.08■■■■□ 3.85
TSPAN4-207ENST00000397411 BCORL1Q5H9F3 1711 aa39.06■■■■□ 3.84
TSPAN4-207ENST00000397411 INO80Q9ULG1 1556 aaPredicted RBP39.04■■■■□ 3.84
TSPAN4-207ENST00000397411 RTEL1-TNFRSF6BF6WH68 1400 aa39.04■■■■□ 3.84
TSPAN4-207ENST00000397411 FAM50AQ14320 339 aaKnown RBP39.03■■■■□ 3.84
TSPAN4-207ENST00000397411 SIGLEC1Q9BZZ2 1709 aa39.02■■■■□ 3.84
TSPAN4-207ENST00000397411 REREQ9P2R6 1566 aa38.99■■■■□ 3.83
TSPAN4-207ENST00000397411 ADAMTSL3P82987 1691 aa38.97■■■■□ 3.83
TSPAN4-207ENST00000397411 TCOF1Q13428 1488 aaKnown RBP38.96■■■■□ 3.83
TSPAN4-207ENST00000397411 A2MP01023 1474 aa38.95■■■■□ 3.83
TSPAN4-207ENST00000397411 ADGBQ8N7X0 1667 aa38.93■■■■□ 3.82
TSPAN4-207ENST00000397411 AGLP35573 1532 aa38.9■■■■□ 3.82
TSPAN4-207ENST00000397411 ESF1Q9H501 851 aaKnown RBP38.89■■■■□ 3.82
TSPAN4-207ENST00000397411 MADDQ8WXG6 1647 aa38.89■■■■□ 3.82
TSPAN4-207ENST00000397411 ABCC5O15440 1437 aa38.88■■■■□ 3.81
TSPAN4-207ENST00000397411 DAPK1P53355 1430 aa38.85■■■■□ 3.81
TSPAN4-207ENST00000397411 MAST1Q9Y2H9 1570 aa38.85■■■■□ 3.81
TSPAN4-207ENST00000397411 DHX29Q7Z478 1369 aaKnown RBP38.84■■■■□ 3.81
TSPAN4-207ENST00000397411 PLPPR3Q6T4P5 718 aa38.84■■■■□ 3.81
TSPAN4-207ENST00000397411 DNMT1P26358 1616 aaKnown RBP38.83■■■■□ 3.81
TSPAN4-207ENST00000397411 RIMS1Q86UR5 1692 aaKnown RBP38.83■■■■□ 3.81
TSPAN4-207ENST00000397411 CHIC2Q9UKJ5 165 aa38.82■■■■□ 3.8
TSPAN4-207ENST00000397411 FER1L4A9Z1Z3 1794 aa38.82■■■■□ 3.8
TSPAN4-207ENST00000397411 PTPRMP28827 1452 aa38.8■■■■□ 3.8
TSPAN4-207ENST00000397411 GGT6Q6P531 493 aa38.8■■■■□ 3.8
TSPAN4-207ENST00000397411 CROCC2H7BZ55 1655 aa38.78■■■■□ 3.8
TSPAN4-207ENST00000397411 PLXNC1O60486 1568 aa38.78■■■■□ 3.8
TSPAN4-207ENST00000397411 KIF3BO15066 747 aa38.77■■■■□ 3.8
TSPAN4-207ENST00000397411 SHANK2Q9UPX8 1470 aa38.77■■■■□ 3.8
TSPAN4-207ENST00000397411 RRP7BPQ9NSQ0 103 aa38.76■■■■□ 3.8
TSPAN4-207ENST00000397411 ANKRD30AQ9BXX3 1397 aa38.71■■■■□ 3.79
TSPAN4-207ENST00000397411 ITGAEP38570 1179 aa38.71■■■■□ 3.79
TSPAN4-207ENST00000397411 KIF15Q9NS87 1388 aa38.68■■■■□ 3.78
TSPAN4-207ENST00000397411 DUOX2Q9NRD8 1548 aa38.64■■■■□ 3.78
TSPAN4-207ENST00000397411 PPP6R1Q9UPN7 881 aa38.64■■■■□ 3.78
TSPAN4-207ENST00000397411 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.63■■■■□ 3.771e-6■■■■■ 46.2
TSPAN4-207ENST00000397411 CEBPAP49715 358 aaPredicted RBP38.62■■■■□ 3.77
TSPAN4-207ENST00000397411 CNTLNQ9NXG0 1405 aa38.62■■■■□ 3.77
TSPAN4-207ENST00000397411 NCOA1Q15788 1441 aa38.57■■■■□ 3.77
TSPAN4-207ENST00000397411 RRBP1Q9P2E9 1410 aaKnown RBP38.57■■■■□ 3.77
TSPAN4-207ENST00000397411 WASHC2CQ9Y4E1 1318 aa38.53■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms