RNA–Protein interactions for RNA: ENST00000397370.3

RBM39-205, Transcript of RNA binding motif protein 39, humanhuman

TSL 2 BASIC

Gene RBM39, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-205ENST00000397370 PREX2Q70Z35 1606 aa25.3■■□□□ 1.64
RBM39-205ENST00000397370 COL17A1Q9UMD9 1497 aaPredicted RBP25.3■■□□□ 1.64
RBM39-205ENST00000397370 ARHGAP5Q13017 1502 aa25.27■■□□□ 1.64
RBM39-205ENST00000397370 AKNAQ7Z591 1439 aa25.27■■□□□ 1.64
RBM39-205ENST00000397370 NCOA2Q15596 1464 aa25.27■■□□□ 1.64
RBM39-205ENST00000397370 GPATCH8Q9UKJ3 1502 aaKnown RBP25.27■■□□□ 1.64
RBM39-205ENST00000397370 EFCAB2Q5VUJ9 269 aa25.26■■□□□ 1.63
RBM39-205ENST00000397370 CCNB3Q8WWL7 1395 aa25.26■■□□□ 1.63
RBM39-205ENST00000397370 ITSN2Q9NZM3 1697 aa25.21■■□□□ 1.63
RBM39-205ENST00000397370 ADGRL1O94910 1474 aa25.19■■□□□ 1.62
RBM39-205ENST00000397370 CFDP1Q9UEE9 299 aaPredicted RBP25.17■■□□□ 1.62
RBM39-205ENST00000397370 DENND4BO75064 1496 aaPredicted RBP25.16■■□□□ 1.62
RBM39-205ENST00000397370 RICTORQ6R327 1708 aa25.15■■□□□ 1.62
RBM39-205ENST00000397370 SCAPERQ9BY12 1400 aa25.15■■□□□ 1.62
RBM39-205ENST00000397370 SAMD9LQ8IVG5 1584 aa25.14■■□□□ 1.62
RBM39-205ENST00000397370 RAPGEF3O95398 923 aa25.14■■□□□ 1.62
RBM39-205ENST00000397370 FRMPD1Q5SYB0 1578 aa25.14■■□□□ 1.61
RBM39-205ENST00000397370 ABCC1P33527 1531 aa25.13■■□□□ 1.61
RBM39-205ENST00000397370 ZNF777Q9ULD5 760 aaPredicted RBP25.13■■□□□ 1.61
RBM39-205ENST00000397370 POGZQ7Z3K3 1410 aa25.09■■□□□ 1.61
RBM39-205ENST00000397370 ARHGEF12Q9NZN5 1544 aa25.08■■□□□ 1.61
RBM39-205ENST00000397370 MYOM3Q5VTT5 1437 aa25.08■■□□□ 1.61
RBM39-205ENST00000397370 PLEKHH2Q8IVE3 1493 aa25.07■■□□□ 1.6
RBM39-205ENST00000397370 SYCP2Q9BX26 1530 aa25.05■■□□□ 1.6
RBM39-205ENST00000397370 ZNF644Q9H582 1327 aaPredicted RBP25.05■■□□□ 1.6
RBM39-205ENST00000397370 KIAA1107Q9UPP5 1409 aa25.04■■□□□ 1.6
RBM39-205ENST00000397370 ZNF518AQ6AHZ1 1483 aa25.04■■□□□ 1.6
RBM39-205ENST00000397370 ZMYM4Q5VZL5 1548 aa25.04■■□□□ 1.6
RBM39-205ENST00000397370 MIA2Q96PC5 1412 aa25.03■■□□□ 1.6
RBM39-205ENST00000397370 TRAPPC8Q9Y2L5 1435 aa25.03■■□□□ 1.6
RBM39-205ENST00000397370 HNRNPMP52272 730 aaKnown RBP eCLIP25.02■■□□□ 1.6
RBM39-205ENST00000397370 PPARGC1BQ86YN6 1023 aaKnown RBP25.02■■□□□ 1.6
RBM39-205ENST00000397370 CAMSAP2Q08AD1 1489 aa25.02■■□□□ 1.6
RBM39-205ENST00000397370 AFAP1Q8N556 730 aa25.01■■□□□ 1.59
RBM39-205ENST00000397370 KDM5CP41229 1560 aa25.01■■□□□ 1.59
RBM39-205ENST00000397370 MAGI2Q86UL8 1455 aa24.97■■□□□ 1.59
RBM39-205ENST00000397370 MBD5Q9P267 1494 aa24.96■■□□□ 1.59
RBM39-205ENST00000397370 FGD6Q6ZV73 1430 aa24.95■■□□□ 1.59
RBM39-205ENST00000397370 PTPN23Q9H3S7 1636 aa24.95■■□□□ 1.58
RBM39-205ENST00000397370 HECW2Q9P2P5 1572 aa24.94■■□□□ 1.58
RBM39-205ENST00000397370 ZFYVE16Q7Z3T8 1539 aa24.94■■□□□ 1.58
RBM39-205ENST00000397370 ARHGEF40Q8TER5 1519 aa24.94■■□□□ 1.58
RBM39-205ENST00000397370 MLH3Q9UHC1 1453 aa24.92■■□□□ 1.58
RBM39-205ENST00000397370 YEATS2Q9ULM3 1422 aa24.92■■□□□ 1.58
RBM39-205ENST00000397370 ARHGEF5Q12774 1597 aa24.91■■□□□ 1.58
RBM39-205ENST00000397370 RSPH4AQ5TD94 716 aa24.9■■□□□ 1.58
RBM39-205ENST00000397370 MYT1LQ9UL68 1186 aa24.9■■□□□ 1.58
RBM39-205ENST00000397370 KIDINS220Q9ULH0 1771 aa24.9■■□□□ 1.58
RBM39-205ENST00000397370 TCOF1Q13428 1488 aaKnown RBP24.89■■□□□ 1.58
RBM39-205ENST00000397370 CCDC141Q6ZP82 1450 aa24.89■■□□□ 1.58
RBM39-205ENST00000397370 SPAG9O60271 1321 aaKnown RBP24.88■■□□□ 1.57
RBM39-205ENST00000397370 INO80Q9ULG1 1556 aaPredicted RBP24.86■■□□□ 1.57
RBM39-205ENST00000397370 ABCA6Q8N139 1617 aa24.86■■□□□ 1.57
RBM39-205ENST00000397370 ATP7AQ04656 1500 aa24.85■■□□□ 1.57
RBM39-205ENST00000397370 DIP2CQ9Y2E4 1556 aa24.84■■□□□ 1.57
RBM39-205ENST00000397370 ATP10AO60312 1499 aa24.83■■□□□ 1.57
RBM39-205ENST00000397370 RTEL1-TNFRSF6BF6WH68 1400 aa24.8■■□□□ 1.56
RBM39-205ENST00000397370 C9orf84Q5VXU9 1444 aa24.8■■□□□ 1.56
RBM39-205ENST00000397370 TSPY4P0CV99 314 aa24.8■■□□□ 1.56
RBM39-205ENST00000397370 TSPY10P0CW01 314 aa24.8■■□□□ 1.56
RBM39-205ENST00000397370 DNMT1P26358 1616 aaKnown RBP24.79■■□□□ 1.56
RBM39-205ENST00000397370 SIGLEC1Q9BZZ2 1709 aa24.79■■□□□ 1.56
RBM39-205ENST00000397370 FAM50AQ14320 339 aaKnown RBP24.79■■□□□ 1.56
RBM39-205ENST00000397370 MAST1Q9Y2H9 1570 aa24.78■■□□□ 1.56
RBM39-205ENST00000397370 CROCC2H7BZ55 1655 aa24.78■■□□□ 1.56
RBM39-205ENST00000397370 ABCC5O15440 1437 aa24.78■■□□□ 1.56
RBM39-205ENST00000397370 REREQ9P2R6 1566 aa24.77■■□□□ 1.56
RBM39-205ENST00000397370 DAPK1P53355 1430 aa24.76■■□□□ 1.55
RBM39-205ENST00000397370 ARID4BQ4LE39 1312 aaPredicted RBP24.74■■□□□ 1.55
RBM39-205ENST00000397370 ADGBQ8N7X0 1667 aa24.74■■□□□ 1.55
RBM39-205ENST00000397370 SHANK2Q9UPX8 1470 aa24.73■■□□□ 1.55
RBM39-205ENST00000397370 RRBP1Q9P2E9 1410 aaKnown RBP24.72■■□□□ 1.55
RBM39-205ENST00000397370 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.71■■□□□ 1.55
RBM39-205ENST00000397370 A2MP01023 1474 aa24.7■■□□□ 1.55
RBM39-205ENST00000397370 BCORL1Q5H9F3 1711 aa24.7■■□□□ 1.54
RBM39-205ENST00000397370 KDM4FA0A1W2PPD8 638 aa24.69■■□□□ 1.54
RBM39-205ENST00000397370 AGLP35573 1532 aa24.69■■□□□ 1.54
RBM39-205ENST00000397370 PLXNC1O60486 1568 aa24.68■■□□□ 1.54
RBM39-205ENST00000397370 ADAMTSL3P82987 1691 aa24.65■■□□□ 1.54
RBM39-205ENST00000397370 CHIC2Q9UKJ5 165 aa24.64■■□□□ 1.54
RBM39-205ENST00000397370 DHX29Q7Z478 1369 aaKnown RBP24.64■■□□□ 1.53
RBM39-205ENST00000397370 MLECQ14165 292 aa24.62■■□□□ 1.53
RBM39-205ENST00000397370 PTPRKQ15262 1439 aa24.61■■□□□ 1.53
RBM39-205ENST00000397370 ADGRL2O95490 1459 aa24.6■■□□□ 1.53
RBM39-205ENST00000397370 ANKRD30AQ9BXX3 1397 aa24.6■■□□□ 1.53
RBM39-205ENST00000397370 RRP7BPQ9NSQ0 103 aa24.59■■□□□ 1.53
RBM39-205ENST00000397370 MADDQ8WXG6 1647 aa24.58■■□□□ 1.53
RBM39-205ENST00000397370 KIF15Q9NS87 1388 aa24.58■■□□□ 1.53
RBM39-205ENST00000397370 DUOX2Q9NRD8 1548 aa24.58■■□□□ 1.53
RBM39-205ENST00000397370 ITGAEP38570 1179 aa24.58■■□□□ 1.53
RBM39-205ENST00000397370 NCOA1Q15788 1441 aa24.58■■□□□ 1.53
RBM39-205ENST00000397370 FER1L4A9Z1Z3 1794 aa24.56■■□□□ 1.52
RBM39-205ENST00000397370 KIF3BO15066 747 aa24.53■■□□□ 1.52
RBM39-205ENST00000397370 EIF2AK4Q9P2K8 1649 aaKnown RBP24.53■■□□□ 1.52
RBM39-205ENST00000397370 RIMS1Q86UR5 1692 aaKnown RBP24.53■■□□□ 1.52
RBM39-205ENST00000397370 ROCK1Q13464 1354 aa24.52■■□□□ 1.52
RBM39-205ENST00000397370 GGT6Q6P531 493 aa24.5■■□□□ 1.51
RBM39-205ENST00000397370 ERBINQ96RT1 1412 aa24.5■■□□□ 1.51
RBM39-205ENST00000397370 RNF17Q9BXT8 1623 aaKnown RBP24.47■■□□□ 1.51
RBM39-205ENST00000397370 PTPRMP28827 1452 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms