RNA–Protein interactions for RNA: ENST00000397261.7

ARPC4-201, Transcript of actin related protein 2/3 complex subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARPC4, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4-201ENST00000397261 CFDP1Q9UEE9 299 aaPredicted RBP26■■□□□ 1.75
ARPC4-201ENST00000397261 ABCC5O15440 1437 aa25.98■■□□□ 1.75
ARPC4-201ENST00000397261 DAPK1P53355 1430 aa25.98■■□□□ 1.75
ARPC4-201ENST00000397261 L3MBTL2Q969R5 705 aa25.93■■□□□ 1.74
ARPC4-201ENST00000397261 KDM5BQ9UGL1 1544 aa25.92■■□□□ 1.74
ARPC4-201ENST00000397261 GCC2Q8IWJ2 1684 aa25.91■■□□□ 1.74
ARPC4-201ENST00000397261 KIF14Q15058 1648 aa25.9■■□□□ 1.74
ARPC4-201ENST00000397261 SLC4A1APQ9BWU0 796 aaKnown RBP25.9■■□□□ 1.74
ARPC4-201ENST00000397261 TROQ12816 1431 aaPredicted RBP25.89■■□□□ 1.74
ARPC4-201ENST00000397261 NUP160Q12769 1436 aa25.89■■□□□ 1.73
ARPC4-201ENST00000397261 CARMIL2Q6F5E8 1435 aa25.89■■□□□ 1.73
ARPC4-201ENST00000397261 HSPA5P11021 654 aaKnown RBP25.87■■□□□ 1.73
ARPC4-201ENST00000397261 PLEKHD1A6NEE1 506 aa25.85■■□□□ 1.73
ARPC4-201ENST00000397261 GPATCH8Q9UKJ3 1502 aaKnown RBP25.84■■□□□ 1.73
ARPC4-201ENST00000397261 ANP32CO43423 234 aa25.83■■□□□ 1.73
ARPC4-201ENST00000397261 CAMSAP2Q08AD1 1489 aa25.83■■□□□ 1.73
ARPC4-201ENST00000397261 AKNAQ7Z591 1439 aa25.82■■□□□ 1.72
ARPC4-201ENST00000397261 DNMT1P26358 1616 aaKnown RBP25.82■■□□□ 1.72
ARPC4-201ENST00000397261 NBPF8Q3BBV2 869 aa25.81■■□□□ 1.72
ARPC4-201ENST00000397261 ATP10BO94823 1461 aa25.78■■□□□ 1.72
ARPC4-201ENST00000397261 ROCK1Q13464 1354 aa25.78■■□□□ 1.72
ARPC4-201ENST00000397261 ANKRD30BQ9BXX2 1392 aa25.77■■□□□ 1.72
ARPC4-201ENST00000397261 C11orf95C9JLR9 678 aaPredicted RBP25.76■■□□□ 1.71
ARPC4-201ENST00000397261 HNRNPMP52272 730 aaKnown RBP eCLIP25.76■■□□□ 1.71
ARPC4-201ENST00000397261 WASHC2AQ641Q2 1341 aa25.76■■□□□ 1.71
ARPC4-201ENST00000397261 SUPT16HQ9Y5B9 1047 aaKnown RBP25.75■■□□□ 1.71
ARPC4-201ENST00000397261 NCOA1Q15788 1441 aa25.74■■□□□ 1.71
ARPC4-201ENST00000397261 ZNF326Q5BKZ1 582 aaKnown RBP25.73■■□□□ 1.71
ARPC4-201ENST00000397261 EIF4G2P78344 907 aaKnown RBP eCLIP25.71■■□□□ 1.71
ARPC4-201ENST00000397261 PTPRGP23470 1445 aa25.7■■□□□ 1.7
ARPC4-201ENST00000397261 PKD2Q13563 968 aa25.69■■□□□ 1.7
ARPC4-201ENST00000397261 ABCA8O94911 1581 aa25.68■■□□□ 1.7
ARPC4-201ENST00000397261 CNGB1Q14028 1251 aaPredicted RBP25.67■■□□□ 1.7
ARPC4-201ENST00000397261 PZPP20742 1482 aa25.66■■□□□ 1.7
ARPC4-201ENST00000397261 BCANQ96GW7 911 aa25.66■■□□□ 1.7
ARPC4-201ENST00000397261 RPRD2Q5VT52 1461 aaKnown RBP25.63■■□□□ 1.69
ARPC4-201ENST00000397261 ITSN2Q9NZM3 1697 aa25.61■■□□□ 1.69
ARPC4-201ENST00000397261 ANKRD30AQ9BXX3 1397 aa25.61■■□□□ 1.69
ARPC4-201ENST00000397261 ABCC10Q5T3U5 1492 aa25.61■■□□□ 1.69
ARPC4-201ENST00000397261 CCER2I3L3R5 266 aa25.6■■□□□ 1.69
ARPC4-201ENST00000397261 CDC42BPAQ5VT25 1732 aa25.6■■□□□ 1.69
ARPC4-201ENST00000397261 TSPY4P0CV99 314 aa25.6■■□□□ 1.69
ARPC4-201ENST00000397261 TSPY10P0CW01 314 aa25.6■■□□□ 1.69
ARPC4-201ENST00000397261 CCDC184Q52MB2 194 aa25.59■■□□□ 1.69
ARPC4-201ENST00000397261 ANKRD50Q9ULJ7 1429 aa25.59■■□□□ 1.69
ARPC4-201ENST00000397261 ADCY10Q96PN6 1610 aa25.59■■□□□ 1.69
ARPC4-201ENST00000397261 POLR3GLQ9BT43 218 aa25.58■■□□□ 1.69
ARPC4-201ENST00000397261 NUP155O75694 1391 aa25.58■■□□□ 1.69
ARPC4-201ENST00000397261 TEX14Q8IWB6 1497 aa25.58■■□□□ 1.69
ARPC4-201ENST00000397261 ERCC6L2Q5T890 1561 aa25.58■■□□□ 1.69
ARPC4-201ENST00000397261 CHD1O14646 1710 aa25.57■■□□□ 1.68
ARPC4-201ENST00000397261 C9orf84Q5VXU9 1444 aa25.56■■□□□ 1.68
ARPC4-201ENST00000397261 KDM2AQ9Y2K7 1162 aa25.53■■□□□ 1.68
ARPC4-201ENST00000397261 FKBP8Q14318 412 aa25.52■■□□□ 1.68
ARPC4-201ENST00000397261 ADGBQ8N7X0 1667 aa25.5■■□□□ 1.67
ARPC4-201ENST00000397261 ADGRL2O95490 1459 aa25.5■■□□□ 1.67
ARPC4-201ENST00000397261 KIAA1107Q9UPP5 1409 aa25.5■■□□□ 1.67
ARPC4-201ENST00000397261 CROCC2H7BZ55 1655 aa25.5■■□□□ 1.67
ARPC4-201ENST00000397261 CCDC7Q96M83 1385 aa25.48■■□□□ 1.67
ARPC4-201ENST00000397261 KIF15Q9NS87 1388 aa25.48■■□□□ 1.67
ARPC4-201ENST00000397261 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.48■■□□□ 1.673e-10■■□□□ 11.4
ARPC4-201ENST00000397261 HNRNPUQ00839 825 aaKnown RBP eCLIP25.48■■□□□ 1.67
ARPC4-201ENST00000397261 KIF7Q2M1P5 1343 aa25.47■■□□□ 1.67
ARPC4-201ENST00000397261 MBD5Q9P267 1494 aa25.43■■□□□ 1.66
ARPC4-201ENST00000397261 FAM9BQ8IZU0 186 aa25.41■■□□□ 1.66
ARPC4-201ENST00000397261 CNTLNQ9NXG0 1405 aa25.4■■□□□ 1.66
ARPC4-201ENST00000397261 SPATA31E1Q6ZUB1 1445 aa25.4■■□□□ 1.66
ARPC4-201ENST00000397261 SAMD9LQ8IVG5 1584 aa25.4■■□□□ 1.66
ARPC4-201ENST00000397261 CDC42BPBQ9Y5S2 1711 aa25.4■■□□□ 1.66
ARPC4-201ENST00000397261 SENP3-EIF4A1A0A087X0R7 540 aa25.39■■□□□ 1.65
ARPC4-201ENST00000397261 DCAF11Q8TEB1 546 aa25.39■■□□□ 1.65
ARPC4-201ENST00000397261 PRKRIP1Q9H875 184 aaPredicted RBP25.38■■□□□ 1.65
ARPC4-201ENST00000397261 RGL3Q3MIN7 710 aa25.38■■□□□ 1.65
ARPC4-201ENST00000397261 TTC37Q6PGP7 1564 aa25.36■■□□□ 1.65
ARPC4-201ENST00000397261 ARHGAP5Q13017 1502 aa25.35■■□□□ 1.65
ARPC4-201ENST00000397261 SYCP2Q9BX26 1530 aa25.35■■□□□ 1.65
ARPC4-201ENST00000397261 USP47Q96K76 1375 aa25.34■■□□□ 1.65
ARPC4-201ENST00000397261 IRX6P78412 446 aaPredicted RBP25.34■■□□□ 1.65
ARPC4-201ENST00000397261 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.32■■□□□ 1.641e-7■□□□□ 9.5
ARPC4-201ENST00000397261 SHANK2Q9UPX8 1470 aa25.32■■□□□ 1.64
ARPC4-201ENST00000397261 CARD11Q9BXL7 1154 aa25.32■■□□□ 1.64
ARPC4-201ENST00000397261 MRS2Q9HD23 443 aa25.32■■□□□ 1.64
ARPC4-201ENST00000397261 CCDC141Q6ZP82 1450 aa25.32■■□□□ 1.64
ARPC4-201ENST00000397261 PREX2Q70Z35 1606 aa25.28■■□□□ 1.64
ARPC4-201ENST00000397261 SHROOM2Q13796 1616 aa25.27■■□□□ 1.64
ARPC4-201ENST00000397261 BCORL1Q5H9F3 1711 aa25.26■■□□□ 1.63
ARPC4-201ENST00000397261 ST20-MTHFSA0A0A6YYL1 179 aa25.26■■□□□ 1.63
ARPC4-201ENST00000397261 ARHGEF5Q12774 1597 aa25.24■■□□□ 1.63
ARPC4-201ENST00000397261 ABCC2Q92887 1545 aa25.24■■□□□ 1.63
ARPC4-201ENST00000397261 ARHGEF12Q9NZN5 1544 aa25.24■■□□□ 1.63
ARPC4-201ENST00000397261 NEFLP07196 543 aa25.24■■□□□ 1.63
ARPC4-201ENST00000397261 PLEKHH2Q8IVE3 1493 aa25.23■■□□□ 1.63
ARPC4-201ENST00000397261 FAM135AQ9P2D6 1515 aa25.22■■□□□ 1.63
ARPC4-201ENST00000397261 NBPF1Q3BBV0 1214 aa25.2■■□□□ 1.63
ARPC4-201ENST00000397261 AFAP1Q8N556 730 aa25.2■■□□□ 1.63
ARPC4-201ENST00000397261 RSPH4AQ5TD94 716 aa25.19■■□□□ 1.62
ARPC4-201ENST00000397261 TSHZ2Q9NRE2 1034 aa25.18■■□□□ 1.62
ARPC4-201ENST00000397261 DHX29Q7Z478 1369 aaKnown RBP25.15■■□□□ 1.62
ARPC4-201ENST00000397261 KDM5DQ9BY66 1539 aa25.14■■□□□ 1.62
ARPC4-201ENST00000397261 KDM5CP41229 1560 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms