RNA–Protein interactions for RNA: ENST00000397238.6

AGAP3-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-202ENST00000397238 MYT1LQ9UL68 1186 aa26.88■■□□□ 1.89
AGAP3-202ENST00000397238 NPM2Q86SE8 214 aaKnown RBP26.88■■□□□ 1.89
AGAP3-202ENST00000397238 SNAPC4Q5SXM2 1469 aa26.85■■□□□ 1.89
AGAP3-202ENST00000397238 ABCA5Q8WWZ7 1642 aa26.85■■□□□ 1.89
AGAP3-202ENST00000397238 CTTNBP2Q8WZ74 1663 aa26.84■■□□□ 1.89
AGAP3-202ENST00000397238 RTL5Q5HYW3 569 aaPredicted RBP26.83■■□□□ 1.89
AGAP3-202ENST00000397238 ZBTB47Q9UFB7 747 aaPredicted RBP26.82■■□□□ 1.88
AGAP3-202ENST00000397238 SALL2Q9Y467 1007 aaPredicted RBP26.82■■□□□ 1.88
AGAP3-202ENST00000397238 SLC4A1APQ9BWU0 796 aaKnown RBP26.82■■□□□ 1.88
AGAP3-202ENST00000397238 NCOA1Q15788 1441 aa26.81■■□□□ 1.88
AGAP3-202ENST00000397238 ZNF608Q9ULD9 1512 aaPredicted RBP26.81■■□□□ 1.88
AGAP3-202ENST00000397238 DENND4BO75064 1496 aaPredicted RBP26.8■■□□□ 1.88
AGAP3-202ENST00000397238 NUDCQ9Y266 331 aa26.78■■□□□ 1.88
AGAP3-202ENST00000397238 MRC2Q9UBG0 1479 aa26.77■■□□□ 1.88
AGAP3-202ENST00000397238 IPO9Q96P70 1041 aaKnown RBP26.77■■□□□ 1.88
AGAP3-202ENST00000397238 KDM6BO15054 1643 aa26.76■■□□□ 1.87
AGAP3-202ENST00000397238 TARBP1Q13395 1621 aaKnown RBP26.75■■□□□ 1.87
AGAP3-202ENST00000397238 ERCC6Q03468 1493 aa26.74■■□□□ 1.87
AGAP3-202ENST00000397238 TMC1Q8TDI8 760 aa26.72■■□□□ 1.87
AGAP3-202ENST00000397238 CHMP7Q8WUX9 453 aaPredicted RBP26.72■■□□□ 1.87
AGAP3-202ENST00000397238 SUPT6HQ7KZ85 1726 aaKnown RBP26.7■■□□□ 1.86
AGAP3-202ENST00000397238 ZNF644Q9H582 1327 aaPredicted RBP26.69■■□□□ 1.86
AGAP3-202ENST00000397238 RTN4Q9NQC3 1192 aaKnown RBP26.67■■□□□ 1.86
AGAP3-202ENST00000397238 GRIN2BQ13224 1484 aa26.67■■□□□ 1.86
AGAP3-202ENST00000397238 LAS1LQ9Y4W2 734 aaKnown RBP26.67■■□□□ 1.86
AGAP3-202ENST00000397238 MAGI3Q5TCQ9 1506 aa26.66■■□□□ 1.86
AGAP3-202ENST00000397238 LRRIQ1Q96JM4 1722 aa26.66■■□□□ 1.86
AGAP3-202ENST00000397238 SMG6Q86US8 1419 aaKnown RBP26.65■■□□□ 1.86
AGAP3-202ENST00000397238 EHBP1L1Q8N3D4 1523 aa26.63■■□□□ 1.85
AGAP3-202ENST00000397238 SAMD9Q5K651 1589 aa26.63■■□□□ 1.85
AGAP3-202ENST00000397238 ANKRD30BQ9BXX2 1392 aa26.63■■□□□ 1.85
AGAP3-202ENST00000397238 UGGT2Q9NYU1 1516 aa26.62■■□□□ 1.85
AGAP3-202ENST00000397238 CDK13Q14004 1512 aaKnown RBP26.61■■□□□ 1.85
AGAP3-202ENST00000397238 EXOC6Q8TAG9 804 aa26.59■■□□□ 1.85
AGAP3-202ENST00000397238 ZNF777Q9ULD5 760 aaPredicted RBP26.58■■□□□ 1.85
AGAP3-202ENST00000397238 IQGAP2Q13576 1575 aa26.58■■□□□ 1.85
AGAP3-202ENST00000397238 ANO8Q9HCE9 1232 aaPredicted RBP26.58■■□□□ 1.84
AGAP3-202ENST00000397238 KDM2AQ9Y2K7 1162 aa26.57■■□□□ 1.84
AGAP3-202ENST00000397238 PBRM1Q86U86 1689 aa26.56■■□□□ 1.84
AGAP3-202ENST00000397238 IL27Q8NEV9 243 aa26.56■■□□□ 1.84
AGAP3-202ENST00000397238 PNISRQ8TF01 805 aaKnown RBP26.56■■□□□ 1.84
AGAP3-202ENST00000397238 IFT140Q96RY7 1462 aa26.55■■□□□ 1.84
AGAP3-202ENST00000397238 HECW1Q76N89 1606 aa26.55■■□□□ 1.84
AGAP3-202ENST00000397238 RPRD2Q5VT52 1461 aaKnown RBP26.54■■□□□ 1.84
AGAP3-202ENST00000397238 USP47Q96K76 1375 aa26.54■■□□□ 1.84
AGAP3-202ENST00000397238 SPATA31E1Q6ZUB1 1445 aa26.54■■□□□ 1.84
AGAP3-202ENST00000397238 DHX29Q7Z478 1369 aaKnown RBP26.53■■□□□ 1.84
AGAP3-202ENST00000397238 ADAMTS12P58397 1594 aa26.53■■□□□ 1.84
AGAP3-202ENST00000397238 EPRSP07814 1512 aaKnown RBP26.52■■□□□ 1.84
AGAP3-202ENST00000397238 NEFMP07197 916 aa26.51■■□□□ 1.83
AGAP3-202ENST00000397238 SKAP1Q86WV1 359 aa26.5■■□□□ 1.83
AGAP3-202ENST00000397238 RNF123Q5XPI4 1314 aa26.49■■□□□ 1.83
AGAP3-202ENST00000397238 TEX14Q8IWB6 1497 aa26.48■■□□□ 1.83
AGAP3-202ENST00000397238 PKD2Q13563 968 aa26.48■■□□□ 1.83
AGAP3-202ENST00000397238 TCOF1Q13428 1488 aaKnown RBP26.47■■□□□ 1.83
AGAP3-202ENST00000397238 CARD11Q9BXL7 1154 aa26.47■■□□□ 1.83
AGAP3-202ENST00000397238 GCC2Q8IWJ2 1684 aa26.46■■□□□ 1.83
AGAP3-202ENST00000397238 PDE4AP27815 886 aa26.45■■□□□ 1.83
AGAP3-202ENST00000397238 RRP1P56182 461 aaKnown RBP26.45■■□□□ 1.83
AGAP3-202ENST00000397238 PLIN1O60240 522 aa26.44■■□□□ 1.82
AGAP3-202ENST00000397238 RCAN3Q9UKA8 241 aa26.43■■□□□ 1.82
AGAP3-202ENST00000397238 ARHGEF11O15085 1522 aa26.43■■□□□ 1.82
AGAP3-202ENST00000397238 DAPK1P53355 1430 aa26.42■■□□□ 1.82
AGAP3-202ENST00000397238 JPH4Q96JJ6 628 aa26.42■■□□□ 1.82
AGAP3-202ENST00000397238 THOC2Q8NI27 1593 aaKnown RBP26.41■■□□□ 1.82
AGAP3-202ENST00000397238 ST20-MTHFSA0A0A6YYL1 179 aa26.41■■□□□ 1.82
AGAP3-202ENST00000397238 MIA2Q96PC5 1412 aa26.4■■□□□ 1.82
AGAP3-202ENST00000397238 KIAA0586Q9BVV6 1533 aa26.4■■□□□ 1.82
AGAP3-202ENST00000397238 ABCC5O15440 1437 aa26.4■■□□□ 1.82
AGAP3-202ENST00000397238 GRIN2AQ12879 1464 aa26.39■■□□□ 1.82
AGAP3-202ENST00000397238 WDR62O43379 1518 aa26.38■■□□□ 1.81
AGAP3-202ENST00000397238 CDCA7LQ96GN5 454 aa26.38■■□□□ 1.81
AGAP3-202ENST00000397238 CFDP1Q9UEE9 299 aaPredicted RBP26.37■■□□□ 1.81
AGAP3-202ENST00000397238 PRKCSHP14314 528 aaPredicted RBP26.36■■□□□ 1.81
AGAP3-202ENST00000397238 TCERG1O14776 1098 aaKnown RBP26.36■■□□□ 1.81
AGAP3-202ENST00000397238 DISP1Q96F81 1524 aa26.34■■□□□ 1.81
AGAP3-202ENST00000397238 EIF4G3O43432 1585 aaKnown RBP26.34■■□□□ 1.81
AGAP3-202ENST00000397238 PRG4Q92954 1404 aaPredicted RBP26.33■■□□□ 1.81
AGAP3-202ENST00000397238 SLC4A3P48751 1232 aa26.33■■□□□ 1.8
AGAP3-202ENST00000397238 DCAF11Q8TEB1 546 aa26.32■■□□□ 1.8
AGAP3-202ENST00000397238 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.31■■□□□ 1.8
AGAP3-202ENST00000397238 PLB1Q6P1J6 1458 aa26.31■■□□□ 1.8
AGAP3-202ENST00000397238 BCORL1Q5H9F3 1711 aa26.31■■□□□ 1.8
AGAP3-202ENST00000397238 BACH2Q9BYV9 841 aa26.31■■□□□ 1.8
AGAP3-202ENST00000397238 MYBBP1AQ9BQG0 1328 aaKnown RBP26.3■■□□□ 1.8
AGAP3-202ENST00000397238 KIF15Q9NS87 1388 aa26.29■■□□□ 1.8
AGAP3-202ENST00000397238 ROCK1Q13464 1354 aa26.28■■□□□ 1.8
AGAP3-202ENST00000397238 NUP153P49790 1475 aaKnown RBP26.28■■□□□ 1.8
AGAP3-202ENST00000397238 CC2D1BQ5T0F9 858 aaKnown RBP26.27■■□□□ 1.8
AGAP3-202ENST00000397238 KIAA0556O60303 1618 aa26.24■■□□□ 1.79
AGAP3-202ENST00000397238 PZPP20742 1482 aa26.24■■□□□ 1.79
AGAP3-202ENST00000397238 CRBNQ96SW2 442 aa26.23■■□□□ 1.79
AGAP3-202ENST00000397238 PLEKHD1A6NEE1 506 aa26.22■■□□□ 1.79
AGAP3-202ENST00000397238 RALBP1Q15311 655 aa26.22■■□□□ 1.79
AGAP3-202ENST00000397238 RGL3Q3MIN7 710 aa26.22■■□□□ 1.79
AGAP3-202ENST00000397238 KIAA1107Q9UPP5 1409 aa26.21■■□□□ 1.79
AGAP3-202ENST00000397238 SYNJ2O15056 1496 aa26.2■■□□□ 1.78
AGAP3-202ENST00000397238 NUP155O75694 1391 aa26.2■■□□□ 1.78
AGAP3-202ENST00000397238 DAXXQ9UER7 740 aaPredicted RBP26.2■■□□□ 1.78
AGAP3-202ENST00000397238 BRD4O60885 1362 aaPredicted RBP26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms