RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 EFCAB2Q5VUJ9 269 aa30■■■□□ 2.39
HOXA9-202ENST00000396345 PREX2Q70Z35 1606 aa30■■■□□ 2.39
HOXA9-202ENST00000396345 NCOA2Q15596 1464 aa29.99■■■□□ 2.39
HOXA9-202ENST00000396345 CDC42BPBQ9Y5S2 1711 aa29.99■■■□□ 2.39
HOXA9-202ENST00000396345 ARHGAP5Q13017 1502 aa29.99■■■□□ 2.39
HOXA9-202ENST00000396345 GPATCH8Q9UKJ3 1502 aaKnown RBP29.98■■■□□ 2.39
HOXA9-202ENST00000396345 AKNAQ7Z591 1439 aa29.97■■■□□ 2.39
HOXA9-202ENST00000396345 COL17A1Q9UMD9 1497 aaPredicted RBP29.96■■■□□ 2.39
HOXA9-202ENST00000396345 CFDP1Q9UEE9 299 aaPredicted RBP29.9■■■□□ 2.38
HOXA9-202ENST00000396345 ITSN2Q9NZM3 1697 aa29.9■■■□□ 2.38
HOXA9-202ENST00000396345 ADGRL1O94910 1474 aa29.88■■■□□ 2.37
HOXA9-202ENST00000396345 ZNF777Q9ULD5 760 aaPredicted RBP29.87■■■□□ 2.37
HOXA9-202ENST00000396345 SCAPERQ9BY12 1400 aa29.85■■■□□ 2.37
HOXA9-202ENST00000396345 DENND4BO75064 1496 aaPredicted RBP29.85■■■□□ 2.37
HOXA9-202ENST00000396345 RAPGEF3O95398 923 aa29.83■■■□□ 2.37
HOXA9-202ENST00000396345 SAMD9LQ8IVG5 1584 aa29.8■■■□□ 2.36
HOXA9-202ENST00000396345 ABCC1P33527 1531 aa29.79■■■□□ 2.36
HOXA9-202ENST00000396345 MYOM3Q5VTT5 1437 aa29.79■■■□□ 2.36
HOXA9-202ENST00000396345 PPARGC1BQ86YN6 1023 aaKnown RBP29.78■■■□□ 2.36
HOXA9-202ENST00000396345 RICTORQ6R327 1708 aa29.77■■■□□ 2.36
HOXA9-202ENST00000396345 FRMPD1Q5SYB0 1578 aa29.77■■■□□ 2.36
HOXA9-202ENST00000396345 PLEKHH2Q8IVE3 1493 aa29.75■■■□□ 2.35
HOXA9-202ENST00000396345 POGZQ7Z3K3 1410 aa29.75■■■□□ 2.35
HOXA9-202ENST00000396345 ZNF644Q9H582 1327 aaPredicted RBP29.74■■■□□ 2.35
HOXA9-202ENST00000396345 ARHGEF12Q9NZN5 1544 aa29.74■■■□□ 2.35
HOXA9-202ENST00000396345 MIA2Q96PC5 1412 aa29.72■■■□□ 2.35
HOXA9-202ENST00000396345 KIAA1107Q9UPP5 1409 aa29.72■■■□□ 2.35
HOXA9-202ENST00000396345 SYCP2Q9BX26 1530 aa29.71■■■□□ 2.35
HOXA9-202ENST00000396345 HNRNPMP52272 730 aaKnown RBP eCLIP29.71■■■□□ 2.35
HOXA9-202ENST00000396345 ZNF518AQ6AHZ1 1483 aa29.7■■■□□ 2.35
HOXA9-202ENST00000396345 CAMSAP2Q08AD1 1489 aa29.69■■■□□ 2.34
HOXA9-202ENST00000396345 AFAP1Q8N556 730 aa29.69■■■□□ 2.34
HOXA9-202ENST00000396345 TRAPPC8Q9Y2L5 1435 aa29.69■■■□□ 2.34
HOXA9-202ENST00000396345 ZMYM4Q5VZL5 1548 aa29.66■■■□□ 2.34
HOXA9-202ENST00000396345 FGD6Q6ZV73 1430 aa29.64■■■□□ 2.34
HOXA9-202ENST00000396345 KDM5CP41229 1560 aa29.63■■■□□ 2.33
HOXA9-202ENST00000396345 MBD5Q9P267 1494 aa29.61■■■□□ 2.33
HOXA9-202ENST00000396345 PTPN23Q9H3S7 1636 aa29.61■■■□□ 2.33
HOXA9-202ENST00000396345 MAGI2Q86UL8 1455 aa29.61■■■□□ 2.33
HOXA9-202ENST00000396345 MYT1LQ9UL68 1186 aa29.58■■■□□ 2.33
HOXA9-202ENST00000396345 ZFYVE16Q7Z3T8 1539 aa29.57■■■□□ 2.32
HOXA9-202ENST00000396345 HECW2Q9P2P5 1572 aa29.56■■■□□ 2.32
HOXA9-202ENST00000396345 RSPH4AQ5TD94 716 aa29.56■■■□□ 2.32
HOXA9-202ENST00000396345 TCOF1Q13428 1488 aaKnown RBP29.55■■■□□ 2.32
HOXA9-202ENST00000396345 MLH3Q9UHC1 1453 aa29.55■■■□□ 2.32
HOXA9-202ENST00000396345 ARHGEF5Q12774 1597 aa29.55■■■□□ 2.32
HOXA9-202ENST00000396345 ARHGEF40Q8TER5 1519 aa29.55■■■□□ 2.32
HOXA9-202ENST00000396345 CCDC141Q6ZP82 1450 aa29.55■■■□□ 2.32
HOXA9-202ENST00000396345 YEATS2Q9ULM3 1422 aa29.54■■■□□ 2.32
HOXA9-202ENST00000396345 SPAG9O60271 1321 aaKnown RBP29.54■■■□□ 2.32
HOXA9-202ENST00000396345 FAM50AQ14320 339 aaKnown RBP29.49■■■□□ 2.31
HOXA9-202ENST00000396345 KIDINS220Q9ULH0 1771 aa29.49■■■□□ 2.31
HOXA9-202ENST00000396345 KDM4FA0A1W2PPD8 638 aa29.48■■■□□ 2.31
HOXA9-202ENST00000396345 TSPY4P0CV99 314 aa29.47■■■□□ 2.31
HOXA9-202ENST00000396345 TSPY10P0CW01 314 aa29.47■■■□□ 2.31
HOXA9-202ENST00000396345 INO80Q9ULG1 1556 aaPredicted RBP29.47■■■□□ 2.31
HOXA9-202ENST00000396345 ATP7AQ04656 1500 aa29.46■■■□□ 2.31
HOXA9-202ENST00000396345 ATP10AO60312 1499 aa29.46■■■□□ 2.31
HOXA9-202ENST00000396345 DIP2CQ9Y2E4 1556 aa29.44■■■□□ 2.3
HOXA9-202ENST00000396345 ABCA6Q8N139 1617 aa29.44■■■□□ 2.3
HOXA9-202ENST00000396345 RTEL1-TNFRSF6BF6WH68 1400 aa29.44■■■□□ 2.3
HOXA9-202ENST00000396345 DNMT1P26358 1616 aaKnown RBP29.42■■■□□ 2.3
HOXA9-202ENST00000396345 ABCC5O15440 1437 aa29.41■■■□□ 2.3
HOXA9-202ENST00000396345 C9orf84Q5VXU9 1444 aa29.41■■■□□ 2.3
HOXA9-202ENST00000396345 DAPK1P53355 1430 aa29.4■■■□□ 2.3
HOXA9-202ENST00000396345 ARID4BQ4LE39 1312 aaPredicted RBP29.38■■■□□ 2.29
HOXA9-202ENST00000396345 MAST1Q9Y2H9 1570 aa29.38■■■□□ 2.29
HOXA9-202ENST00000396345 CROCC2H7BZ55 1655 aa29.37■■■□□ 2.29
HOXA9-202ENST00000396345 RRBP1Q9P2E9 1410 aaKnown RBP29.37■■■□□ 2.29
HOXA9-202ENST00000396345 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.35■■■□□ 2.29
HOXA9-202ENST00000396345 SHANK2Q9UPX8 1470 aa29.35■■■□□ 2.29
HOXA9-202ENST00000396345 REREQ9P2R6 1566 aa29.34■■■□□ 2.29
HOXA9-202ENST00000396345 SIGLEC1Q9BZZ2 1709 aa29.33■■■□□ 2.29
HOXA9-202ENST00000396345 ADGBQ8N7X0 1667 aa29.32■■■□□ 2.28
HOXA9-202ENST00000396345 A2MP01023 1474 aa29.3■■■□□ 2.28
HOXA9-202ENST00000396345 CHIC2Q9UKJ5 165 aa29.29■■■□□ 2.28
HOXA9-202ENST00000396345 PLXNC1O60486 1568 aa29.26■■■□□ 2.28
HOXA9-202ENST00000396345 AGLP35573 1532 aa29.25■■■□□ 2.27
HOXA9-202ENST00000396345 DHX29Q7Z478 1369 aaKnown RBP29.25■■■□□ 2.27
HOXA9-202ENST00000396345 ITGAEP38570 1179 aa29.24■■■□□ 2.27
HOXA9-202ENST00000396345 BCORL1Q5H9F3 1711 aa29.24■■■□□ 2.27
HOXA9-202ENST00000396345 MLECQ14165 292 aa29.23■■■□□ 2.27
HOXA9-202ENST00000396345 PTPRKQ15262 1439 aa29.22■■■□□ 2.27
HOXA9-202ENST00000396345 ANKRD30AQ9BXX3 1397 aa29.22■■■□□ 2.27
HOXA9-202ENST00000396345 RRP7BPQ9NSQ0 103 aa29.21■■■□□ 2.27
HOXA9-202ENST00000396345 ADGRL2O95490 1459 aa29.2■■■□□ 2.26
HOXA9-202ENST00000396345 KIF15Q9NS87 1388 aa29.19■■■□□ 2.26
HOXA9-202ENST00000396345 NCOA1Q15788 1441 aa29.19■■■□□ 2.26
HOXA9-202ENST00000396345 DUOX2Q9NRD8 1548 aa29.17■■■□□ 2.26
HOXA9-202ENST00000396345 ADAMTSL3P82987 1691 aa29.16■■■□□ 2.26
HOXA9-202ENST00000396345 ROCK1Q13464 1354 aa29.13■■■□□ 2.25
HOXA9-202ENST00000396345 KIF3BO15066 747 aa29.12■■■□□ 2.25
HOXA9-202ENST00000396345 MADDQ8WXG6 1647 aa29.11■■■□□ 2.25
HOXA9-202ENST00000396345 GGT6Q6P531 493 aa29.09■■■□□ 2.25
HOXA9-202ENST00000396345 ERBINQ96RT1 1412 aa29.08■■■□□ 2.25
HOXA9-202ENST00000396345 EIF2AK4Q9P2K8 1649 aaKnown RBP29.08■■■□□ 2.25
HOXA9-202ENST00000396345 FER1L4A9Z1Z3 1794 aa29.07■■■□□ 2.24
HOXA9-202ENST00000396345 ESF1Q9H501 851 aaKnown RBP29.04■■■□□ 2.24
HOXA9-202ENST00000396345 RIMS1Q86UR5 1692 aaKnown RBP29.04■■■□□ 2.24
HOXA9-202ENST00000396345 ANKRD50Q9ULJ7 1429 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms