RNA–Protein interactions for RNA: ENST00000395377.2

TFAM-203, Transcript of transcription factor A, mitochondrial, humanhuman

TSL 2

Gene TFAM, Length 663 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-203ENST00000395377 CFAP44Q96MT7 982 aa13.63□□□□□ -0.23
TFAM-203ENST00000395377 CADPS2Q86UW7 1296 aa13.52□□□□□ -0.25
TFAM-203ENST00000395377 KIF3CO14782 793 aa13.51□□□□□ -0.25
TFAM-203ENST00000395377 HAP1P54257 671 aaPredicted RBP13.51□□□□□ -0.25
TFAM-203ENST00000395377 C2orf72A6NCS6 295 aa13.5□□□□□ -0.25
TFAM-203ENST00000395377 NCKAP5LQ9HCH0 1330 aa13.46□□□□□ -0.25
TFAM-203ENST00000395377 TMC2Q8TDI7 906 aa13.45□□□□□ -0.26
TFAM-203ENST00000395377 CRISPLD2Q9H0B8 497 aa13.43□□□□□ -0.26
TFAM-203ENST00000395377 GPHNQ9NQX3 736 aaPredicted RBP13.42□□□□□ -0.26
TFAM-203ENST00000395377 HOXB3P14651 431 aaPredicted RBP13.41□□□□□ -0.26
TFAM-203ENST00000395377 TSHZ2Q9NRE2 1034 aa13.41□□□□□ -0.26
TFAM-203ENST00000395377 DSG2Q14126 1118 aa13.38□□□□□ -0.27
TFAM-203ENST00000395377 LCE2DQ5TA82 110 aaPredicted RBP13.38□□□□□ -0.27
TFAM-203ENST00000395377 FAM163AQ96GL9 167 aaPredicted RBP13.37□□□□□ -0.27
TFAM-203ENST00000395377 PDE4AP27815 886 aa13.36□□□□□ -0.27
TFAM-203ENST00000395377 FOXK1P85037 733 aa13.35□□□□□ -0.27
TFAM-203ENST00000395377 LARP6Q9BRS8 491 aaKnown RBP13.35□□□□□ -0.27
TFAM-203ENST00000395377 SNPHO15079 494 aa13.34□□□□□ -0.27
TFAM-203ENST00000395377 PLPP6Q8IY26 295 aa13.33□□□□□ -0.28
TFAM-203ENST00000395377 ST18O60284 1047 aa13.32□□□□□ -0.28
TFAM-203ENST00000395377 MFSD10Q14728 455 aa13.31□□□□□ -0.28
TFAM-203ENST00000395377 PPP1R15BQ5SWA1 713 aa13.31□□□□□ -0.28
TFAM-203ENST00000395377 DDX27Q96GQ7 796 aaKnown RBP13.29□□□□□ -0.28
TFAM-203ENST00000395377 DOK7Q18PE1 504 aa13.28□□□□□ -0.28
TFAM-203ENST00000395377 VSIG10Q8N0Z9 540 aa13.27□□□□□ -0.29
TFAM-203ENST00000395377 ZNF710Q8N1W2 664 aa13.24□□□□□ -0.29
TFAM-203ENST00000395377 GPR153Q6NV75 609 aa13.22□□□□□ -0.29
TFAM-203ENST00000395377 KHSRPQ92945 711 aaKnown RBP eCLIP13.22□□□□□ -0.292e-6■□□□□ 8.5
TFAM-203ENST00000395377 SLC34A2O95436 690 aa13.21□□□□□ -0.29
TFAM-203ENST00000395377 BCANQ96GW7 911 aa13.21□□□□□ -0.29
TFAM-203ENST00000395377 ARSIQ5FYB1 569 aa13.2□□□□□ -0.3
TFAM-203ENST00000395377 MARVELD3Q96A59 401 aa13.2□□□□□ -0.3
TFAM-203ENST00000395377 RIMBP2O15034 1052 aa13.19□□□□□ -0.3
TFAM-203ENST00000395377 HOXB1P14653 301 aaPredicted RBP13.18□□□□□ -0.3
TFAM-203ENST00000395377 UPF1Q92900 1129 aaKnown RBP eCLIP13.18□□□□□ -0.3
TFAM-203ENST00000395377 PCDHGA4Q9Y5G9 962 aa13.18□□□□□ -0.3
TFAM-203ENST00000395377 PTCD2Q8WV60 388 aaKnown RBP13.17□□□□□ -0.3
TFAM-203ENST00000395377 ZSWIM6Q9HCJ5 1215 aa13.17□□□□□ -0.3
TFAM-203ENST00000395377 EMILIN3Q9NT22 766 aa13.17□□□□□ -0.3
TFAM-203ENST00000395377 OXER1Q8TDS5 423 aa13.16□□□□□ -0.3
TFAM-203ENST00000395377 CAMK2BQ13554 666 aa13.14□□□□□ -0.31
TFAM-203ENST00000395377 KDM2AQ9Y2K7 1162 aa13.13□□□□□ -0.31
TFAM-203ENST00000395377 NUDT7P0C024 238 aa13.12□□□□□ -0.31
TFAM-203ENST00000395377 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
TFAM-203ENST00000395377 WDR70Q9NW82 654 aa13.12□□□□□ -0.31
TFAM-203ENST00000395377 POTEMA6NI47 508 aa13.11□□□□□ -0.31
TFAM-203ENST00000395377 EMP3P54852 163 aa13.11□□□□□ -0.31
TFAM-203ENST00000395377 KDM4FA0A1W2PPD8 638 aa13.09□□□□□ -0.31
TFAM-203ENST00000395377 POTEB3A0JP26 581 aa13.08□□□□□ -0.32
TFAM-203ENST00000395377 E2F4Q16254 413 aa13.08□□□□□ -0.32
TFAM-203ENST00000395377 POTEBQ6S5H4 581 aa13.08□□□□□ -0.32
TFAM-203ENST00000395377 FAM205CA6NFA0 338 aa13.05□□□□□ -0.32
TFAM-203ENST00000395377 DPYSL4O14531 572 aa13.05□□□□□ -0.32
TFAM-203ENST00000395377 TBC1D12O60347 775 aa13.04□□□□□ -0.32
TFAM-203ENST00000395377 PRKCSHP14314 528 aaPredicted RBP13.03□□□□□ -0.32
TFAM-203ENST00000395377 MAP3K9P80192 1104 aa13.02□□□□□ -0.33
TFAM-203ENST00000395377 LHX6Q9UPM6 363 aa13.02□□□□□ -0.33
TFAM-203ENST00000395377 ZNF316A6NFI3 1004 aaPredicted RBP13.01□□□□□ -0.33
TFAM-203ENST00000395377 KCNV2Q8TDN2 545 aa13.01□□□□□ -0.33
TFAM-203ENST00000395377 HS3ST6Q96QI5 342 aa13.01□□□□□ -0.33
TFAM-203ENST00000395377 ERBB3P21860 1342 aa13.01□□□□□ -0.33
TFAM-203ENST00000395377 EVI5O60447 810 aa13□□□□□ -0.33
TFAM-203ENST00000395377 VARS2Q5ST30 1063 aaKnown RBP13□□□□□ -0.33
TFAM-203ENST00000395377 ANO8Q9HCE9 1232 aaPredicted RBP12.95□□□□□ -0.34
TFAM-203ENST00000395377 ARIH1Q9Y4X5 557 aaPredicted RBP12.95□□□□□ -0.34
TFAM-203ENST00000395377 PDIA6Q15084 440 aa12.91□□□□□ -0.34
TFAM-203ENST00000395377 CDAN1Q8IWY9 1227 aa12.91□□□□□ -0.34
TFAM-203ENST00000395377 ARHGEF1Q92888 912 aaKnown RBP12.89□□□□□ -0.35
TFAM-203ENST00000395377 FOSBP53539 338 aa12.87□□□□□ -0.35
TFAM-203ENST00000395377 TPRNQ4KMQ1 711 aa12.86□□□□□ -0.35
TFAM-203ENST00000395377 P3H3Q8IVL6 736 aa12.86□□□□□ -0.35
TFAM-203ENST00000395377 ZNF687Q8N1G0 1237 aa12.86□□□□□ -0.35
TFAM-203ENST00000395377 ZNF454Q8N9F8 522 aa12.86□□□□□ -0.35
TFAM-203ENST00000395377 SPDYE16A6NNV3 312 aaPredicted RBP12.85□□□□□ -0.35
TFAM-203ENST00000395377 POTEEQ6S8J3 1075 aa12.84□□□□□ -0.35
TFAM-203ENST00000395377 DDX12PQ92771 950 aa12.84□□□□□ -0.35
TFAM-203ENST00000395377 JPH4Q96JJ6 628 aa12.84□□□□□ -0.35
TFAM-203ENST00000395377 KRTAP3-3Q9BYR6 98 aa12.84□□□□□ -0.35
TFAM-203ENST00000395377 KRTAP3-2Q9BYR7 98 aa12.84□□□□□ -0.35
TFAM-203ENST00000395377 PSDA5PKW4 1024 aaPredicted RBP12.83□□□□□ -0.36
TFAM-203ENST00000395377 PCDHGA10Q9Y5H3 936 aa12.83□□□□□ -0.36
TFAM-203ENST00000395377 PTGER2P43116 358 aa12.82□□□□□ -0.36
TFAM-203ENST00000395377 PPP4R3BQ5MIZ7 849 aa12.82□□□□□ -0.36
TFAM-203ENST00000395377 AXIN2Q9Y2T1 843 aa12.8□□□□□ -0.36
TFAM-203ENST00000395377 PHF14O94880 888 aa12.78□□□□□ -0.36
TFAM-203ENST00000395377 ADAM33Q9BZ11 813 aa12.78□□□□□ -0.36
TFAM-203ENST00000395377 MLLT3P42568 568 aaPredicted RBP12.77□□□□□ -0.37
TFAM-203ENST00000395377 ZDHHC16Q969W1 377 aa12.77□□□□□ -0.37
TFAM-203ENST00000395377 PCDH10Q9P2E7 1040 aa12.77□□□□□ -0.37
TFAM-203ENST00000395377 GRXCR2A6NFK2 248 aa12.76□□□□□ -0.37
TFAM-203ENST00000395377 SEMA3EO15041 775 aa12.76□□□□□ -0.37
TFAM-203ENST00000395377 PRIM1P49642 420 aaKnown RBP12.76□□□□□ -0.37
TFAM-203ENST00000395377 PSEN2P49810 448 aa12.75□□□□□ -0.37
TFAM-203ENST00000395377 TYW1BQ6NUM6 668 aa12.75□□□□□ -0.37
TFAM-203ENST00000395377 NBR1Q14596 966 aa12.74□□□□□ -0.37
TFAM-203ENST00000395377 BCL2L12Q9HB09 334 aa12.74□□□□□ -0.37
TFAM-203ENST00000395377 RBM33Q96EV2 1170 aaKnown RBP12.72□□□□□ -0.37
TFAM-203ENST00000395377 KCNK17Q96T54 332 aa12.72□□□□□ -0.37
TFAM-203ENST00000395377 EPAS1Q99814 870 aa12.72□□□□□ -0.37
TFAM-203ENST00000395377 ARHGAP33O14559 1287 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms