RNA–Protein interactions for RNA: ENST00000394223.1

NDUFC1-201, Transcript of NADH:ubiquinone oxidoreductase subunit C1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene NDUFC1, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFC1-201ENST00000394223 CDC42BPAQ5VT25 1732 aa23.71■■□□□ 1.39
NDUFC1-201ENST00000394223 ARHGAP5Q13017 1502 aa23.71■■□□□ 1.39
NDUFC1-201ENST00000394223 EFCAB2Q5VUJ9 269 aa23.71■■□□□ 1.39
NDUFC1-201ENST00000394223 CDC42BPBQ9Y5S2 1711 aa23.69■■□□□ 1.38
NDUFC1-201ENST00000394223 ITSN2Q9NZM3 1697 aa23.69■■□□□ 1.38
NDUFC1-201ENST00000394223 GPATCH8Q9UKJ3 1502 aaKnown RBP23.69■■□□□ 1.38
NDUFC1-201ENST00000394223 AKNAQ7Z591 1439 aa23.67■■□□□ 1.38
NDUFC1-201ENST00000394223 CFDP1Q9UEE9 299 aaPredicted RBP23.63■■□□□ 1.37
NDUFC1-201ENST00000394223 ADGRL1O94910 1474 aa23.62■■□□□ 1.37
NDUFC1-201ENST00000394223 COL17A1Q9UMD9 1497 aaPredicted RBP23.61■■□□□ 1.37
NDUFC1-201ENST00000394223 DENND4BO75064 1496 aaPredicted RBP23.59■■□□□ 1.37
NDUFC1-201ENST00000394223 MYOM3Q5VTT5 1437 aa23.57■■□□□ 1.36
NDUFC1-201ENST00000394223 SCAPERQ9BY12 1400 aa23.57■■□□□ 1.36
NDUFC1-201ENST00000394223 PLEKHH2Q8IVE3 1493 aa23.56■■□□□ 1.36
NDUFC1-201ENST00000394223 ABCC1P33527 1531 aa23.56■■□□□ 1.36
NDUFC1-201ENST00000394223 ZNF777Q9ULD5 760 aaPredicted RBP23.56■■□□□ 1.36
NDUFC1-201ENST00000394223 SAMD9LQ8IVG5 1584 aa23.55■■□□□ 1.36
NDUFC1-201ENST00000394223 MIA2Q96PC5 1412 aa23.53■■□□□ 1.36
NDUFC1-201ENST00000394223 POGZQ7Z3K3 1410 aa23.52■■□□□ 1.36
NDUFC1-201ENST00000394223 RICTORQ6R327 1708 aa23.52■■□□□ 1.36
NDUFC1-201ENST00000394223 KIAA1107Q9UPP5 1409 aa23.51■■□□□ 1.35
NDUFC1-201ENST00000394223 RAPGEF3O95398 923 aa23.51■■□□□ 1.35
NDUFC1-201ENST00000394223 FRMPD1Q5SYB0 1578 aa23.51■■□□□ 1.35
NDUFC1-201ENST00000394223 ZNF518AQ6AHZ1 1483 aa23.5■■□□□ 1.35
NDUFC1-201ENST00000394223 SYCP2Q9BX26 1530 aa23.49■■□□□ 1.35
NDUFC1-201ENST00000394223 CAMSAP2Q08AD1 1489 aa23.48■■□□□ 1.35
NDUFC1-201ENST00000394223 ZMYM4Q5VZL5 1548 aa23.47■■□□□ 1.35
NDUFC1-201ENST00000394223 ARHGEF12Q9NZN5 1544 aa23.47■■□□□ 1.35
NDUFC1-201ENST00000394223 FGD6Q6ZV73 1430 aa23.45■■□□□ 1.34
NDUFC1-201ENST00000394223 ZNF644Q9H582 1327 aaPredicted RBP23.45■■□□□ 1.34
NDUFC1-201ENST00000394223 PPARGC1BQ86YN6 1023 aaKnown RBP23.45■■□□□ 1.34
NDUFC1-201ENST00000394223 KDM5CP41229 1560 aa23.44■■□□□ 1.34
NDUFC1-201ENST00000394223 MAGI2Q86UL8 1455 aa23.43■■□□□ 1.34
NDUFC1-201ENST00000394223 TRAPPC8Q9Y2L5 1435 aa23.43■■□□□ 1.34
NDUFC1-201ENST00000394223 PTPN23Q9H3S7 1636 aa23.42■■□□□ 1.34
NDUFC1-201ENST00000394223 HNRNPMP52272 730 aaKnown RBP eCLIP23.42■■□□□ 1.34
NDUFC1-201ENST00000394223 RSPH4AQ5TD94 716 aa23.41■■□□□ 1.34
NDUFC1-201ENST00000394223 AFAP1Q8N556 730 aa23.41■■□□□ 1.34
NDUFC1-201ENST00000394223 MBD5Q9P267 1494 aa23.4■■□□□ 1.34
NDUFC1-201ENST00000394223 TCOF1Q13428 1488 aaKnown RBP23.39■■□□□ 1.34
NDUFC1-201ENST00000394223 ARHGEF5Q12774 1597 aa23.39■■□□□ 1.33
NDUFC1-201ENST00000394223 HECW2Q9P2P5 1572 aa23.39■■□□□ 1.33
NDUFC1-201ENST00000394223 CCDC141Q6ZP82 1450 aa23.38■■□□□ 1.33
NDUFC1-201ENST00000394223 ZFYVE16Q7Z3T8 1539 aa23.38■■□□□ 1.33
NDUFC1-201ENST00000394223 MLH3Q9UHC1 1453 aa23.37■■□□□ 1.33
NDUFC1-201ENST00000394223 ARHGEF40Q8TER5 1519 aa23.37■■□□□ 1.33
NDUFC1-201ENST00000394223 MYT1LQ9UL68 1186 aa23.35■■□□□ 1.33
NDUFC1-201ENST00000394223 SPAG9O60271 1321 aaKnown RBP23.33■■□□□ 1.33
NDUFC1-201ENST00000394223 YEATS2Q9ULM3 1422 aa23.31■■□□□ 1.32
NDUFC1-201ENST00000394223 INO80Q9ULG1 1556 aaPredicted RBP23.31■■□□□ 1.32
NDUFC1-201ENST00000394223 ATP7AQ04656 1500 aa23.3■■□□□ 1.32
NDUFC1-201ENST00000394223 TSPY4P0CV99 314 aa23.3■■□□□ 1.32
NDUFC1-201ENST00000394223 TSPY10P0CW01 314 aa23.3■■□□□ 1.32
NDUFC1-201ENST00000394223 KIDINS220Q9ULH0 1771 aa23.29■■□□□ 1.32
NDUFC1-201ENST00000394223 RTEL1-TNFRSF6BF6WH68 1400 aa23.29■■□□□ 1.32
NDUFC1-201ENST00000394223 FAM50AQ14320 339 aaKnown RBP23.29■■□□□ 1.32
NDUFC1-201ENST00000394223 DNMT1P26358 1616 aaKnown RBP23.28■■□□□ 1.32
NDUFC1-201ENST00000394223 ATP10AO60312 1499 aa23.27■■□□□ 1.32
NDUFC1-201ENST00000394223 DIP2CQ9Y2E4 1556 aa23.27■■□□□ 1.32
NDUFC1-201ENST00000394223 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.27■■□□□ 1.319e-11■■■□□ 15.4
NDUFC1-201ENST00000394223 ABCA6Q8N139 1617 aa23.26■■□□□ 1.31
NDUFC1-201ENST00000394223 MAST1Q9Y2H9 1570 aa23.26■■□□□ 1.31
NDUFC1-201ENST00000394223 DAPK1P53355 1430 aa23.25■■□□□ 1.31
NDUFC1-201ENST00000394223 C9orf84Q5VXU9 1444 aa23.25■■□□□ 1.31
NDUFC1-201ENST00000394223 RRBP1Q9P2E9 1410 aaKnown RBP23.25■■□□□ 1.31
NDUFC1-201ENST00000394223 SHANK2Q9UPX8 1470 aa23.25■■□□□ 1.31
NDUFC1-201ENST00000394223 CROCC2H7BZ55 1655 aa23.25■■□□□ 1.31
NDUFC1-201ENST00000394223 ABCC5O15440 1437 aa23.24■■□□□ 1.31
NDUFC1-201ENST00000394223 REREQ9P2R6 1566 aa23.23■■□□□ 1.31
NDUFC1-201ENST00000394223 ADGBQ8N7X0 1667 aa23.19■■□□□ 1.3
NDUFC1-201ENST00000394223 ARID4BQ4LE39 1312 aaPredicted RBP23.17■■□□□ 1.3
NDUFC1-201ENST00000394223 PLXNC1O60486 1568 aa23.17■■□□□ 1.3
NDUFC1-201ENST00000394223 A2MP01023 1474 aa23.16■■□□□ 1.3
NDUFC1-201ENST00000394223 AGLP35573 1532 aa23.14■■□□□ 1.3
NDUFC1-201ENST00000394223 ANKRD30AQ9BXX3 1397 aa23.13■■□□□ 1.29
NDUFC1-201ENST00000394223 SIGLEC1Q9BZZ2 1709 aa23.12■■□□□ 1.29
NDUFC1-201ENST00000394223 DHX29Q7Z478 1369 aaKnown RBP23.12■■□□□ 1.29
NDUFC1-201ENST00000394223 ADGRL2O95490 1459 aa23.11■■□□□ 1.29
NDUFC1-201ENST00000394223 CHIC2Q9UKJ5 165 aa23.1■■□□□ 1.29
NDUFC1-201ENST00000394223 BCORL1Q5H9F3 1711 aa23.09■■□□□ 1.29
NDUFC1-201ENST00000394223 KIF15Q9NS87 1388 aa23.09■■□□□ 1.29
NDUFC1-201ENST00000394223 DUOX2Q9NRD8 1548 aa23.08■■□□□ 1.29
NDUFC1-201ENST00000394223 NCOA1Q15788 1441 aa23.08■■□□□ 1.28
NDUFC1-201ENST00000394223 ITGAEP38570 1179 aa23.07■■□□□ 1.28
NDUFC1-201ENST00000394223 PTPRKQ15262 1439 aa23.07■■□□□ 1.28
NDUFC1-201ENST00000394223 ROCK1Q13464 1354 aa23.06■■□□□ 1.28
NDUFC1-201ENST00000394223 RRP7BPQ9NSQ0 103 aa23.05■■□□□ 1.28
NDUFC1-201ENST00000394223 ERBINQ96RT1 1412 aa23.03■■□□□ 1.28
NDUFC1-201ENST00000394223 MLECQ14165 292 aa23.03■■□□□ 1.28
NDUFC1-201ENST00000394223 EIF2AK4Q9P2K8 1649 aaKnown RBP23.03■■□□□ 1.28
NDUFC1-201ENST00000394223 ADAMTSL3P82987 1691 aa23.03■■□□□ 1.28
NDUFC1-201ENST00000394223 KDM4FA0A1W2PPD8 638 aa22.99■■□□□ 1.27
NDUFC1-201ENST00000394223 KIF3BO15066 747 aa22.99■■□□□ 1.27
NDUFC1-201ENST00000394223 MADDQ8WXG6 1647 aa22.97■■□□□ 1.27
NDUFC1-201ENST00000394223 FER1L4A9Z1Z3 1794 aa22.97■■□□□ 1.27
NDUFC1-201ENST00000394223 GGT6Q6P531 493 aa22.95■■□□□ 1.26
NDUFC1-201ENST00000394223 ESF1Q9H501 851 aaKnown RBP22.95■■□□□ 1.26
NDUFC1-201ENST00000394223 ANKRD50Q9ULJ7 1429 aa22.95■■□□□ 1.26
NDUFC1-201ENST00000394223 PPP6R1Q9UPN7 881 aa22.95■■□□□ 1.26
NDUFC1-201ENST00000394223 RNF17Q9BXT8 1623 aaKnown RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms