RNA–Protein interactions for RNA: ENST00000392502.8

TRA2A-202, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-202ENST00000392502 MAGI1Q96QZ7 1491 aaPredicted RBP22.26■■□□□ 1.15
TRA2A-202ENST00000392502 ARHGEF11O15085 1522 aa22.26■■□□□ 1.15
TRA2A-202ENST00000392502 KIAA0586Q9BVV6 1533 aa22.25■■□□□ 1.15
TRA2A-202ENST00000392502 KCNH8Q96L42 1107 aa22.25■■□□□ 1.15
TRA2A-202ENST00000392502 CDK13Q14004 1512 aaKnown RBP22.24■■□□□ 1.15
TRA2A-202ENST00000392502 EPRSP07814 1512 aaKnown RBP22.23■■□□□ 1.15
TRA2A-202ENST00000392502 IPO9Q96P70 1041 aaKnown RBP22.22■■□□□ 1.15
TRA2A-202ENST00000392502 PTPN23Q9H3S7 1636 aa22.22■■□□□ 1.15
TRA2A-202ENST00000392502 KIAA0556O60303 1618 aa22.21■■□□□ 1.15
TRA2A-202ENST00000392502 GRIN2AQ12879 1464 aa22.21■■□□□ 1.15
TRA2A-202ENST00000392502 HFM1A2PYH4 1435 aa22.2■■□□□ 1.14
TRA2A-202ENST00000392502 ANP32AP39687 249 aaKnown RBP22.19■■□□□ 1.14
TRA2A-202ENST00000392502 PAK3O75914 559 aaPredicted RBP22.18■■□□□ 1.14
TRA2A-202ENST00000392502 NAIPQ13075 1403 aa22.18■■□□□ 1.14
TRA2A-202ENST00000392502 PLEKHG5O94827 1062 aa22.17■■□□□ 1.14
TRA2A-202ENST00000392502 ZBTB47Q9UFB7 747 aaPredicted RBP22.17■■□□□ 1.14
TRA2A-202ENST00000392502 DISP1Q96F81 1524 aa22.16■■□□□ 1.14
TRA2A-202ENST00000392502 SYNJ2O15056 1496 aa22.16■■□□□ 1.14
TRA2A-202ENST00000392502 TCOF1Q13428 1488 aaKnown RBP22.14■■□□□ 1.13
TRA2A-202ENST00000392502 CHIC2Q9UKJ5 165 aa22.13■■□□□ 1.13
TRA2A-202ENST00000392502 UACAQ9BZF9 1416 aa22.11■■□□□ 1.13
TRA2A-202ENST00000392502 RRP7BPQ9NSQ0 103 aa22.11■■□□□ 1.13
TRA2A-202ENST00000392502 RAPGEF6Q8TEU7 1601 aa22.09■■□□□ 1.13
TRA2A-202ENST00000392502 PPP1R15AO75807 674 aaPredicted RBP22.08■■□□□ 1.13
TRA2A-202ENST00000392502 CHD1O14646 1710 aa22.08■■□□□ 1.13
TRA2A-202ENST00000392502 ZMYND15Q9H091 742 aa22.08■■□□□ 1.13
TRA2A-202ENST00000392502 MIA2Q96PC5 1412 aa22.08■■□□□ 1.12
TRA2A-202ENST00000392502 CHMP7Q8WUX9 453 aaPredicted RBP22.07■■□□□ 1.12
TRA2A-202ENST00000392502 GCC2Q8IWJ2 1684 aa22.07■■□□□ 1.12
TRA2A-202ENST00000392502 AKNAQ7Z591 1439 aa22.07■■□□□ 1.12
TRA2A-202ENST00000392502 TIMELESSQ9UNS1 1208 aa22.06■■□□□ 1.12
TRA2A-202ENST00000392502 NUP153P49790 1475 aaKnown RBP22.06■■□□□ 1.12
TRA2A-202ENST00000392502 HIRIP3Q9BW71 556 aaPredicted RBP22.06■■□□□ 1.12
TRA2A-202ENST00000392502 FBLN2P98095 1184 aa22.04■■□□□ 1.12
TRA2A-202ENST00000392502 CEP170Q5SW79 1584 aa22.04■■□□□ 1.12
TRA2A-202ENST00000392502 KDM6BO15054 1643 aa22.04■■□□□ 1.12
TRA2A-202ENST00000392502 NUP160Q12769 1436 aa22.03■■□□□ 1.12
TRA2A-202ENST00000392502 PPM1GO15355 546 aaPredicted RBP22.03■■□□□ 1.12
TRA2A-202ENST00000392502 FAM43AQ8N2R8 423 aa22.03■■□□□ 1.12
TRA2A-202ENST00000392502 TRIM52Q96A61 297 aa22.02■■□□□ 1.11
TRA2A-202ENST00000392502 ANP32CO43423 234 aa22.01■■□□□ 1.11
TRA2A-202ENST00000392502 TONSLQ96HA7 1378 aa22■■□□□ 1.11
TRA2A-202ENST00000392502 DDX10Q13206 875 aaKnown RBP21.99■■□□□ 1.11
TRA2A-202ENST00000392502 DENND4BO75064 1496 aaPredicted RBP21.98■■□□□ 1.11
TRA2A-202ENST00000392502 ADCY10Q96PN6 1610 aa21.97■■□□□ 1.11
TRA2A-202ENST00000392502 ZNF644Q9H582 1327 aaPredicted RBP21.97■■□□□ 1.11
TRA2A-202ENST00000392502 PLB1Q6P1J6 1458 aa21.95■■□□□ 1.1
TRA2A-202ENST00000392502 VSIG10Q8N0Z9 540 aa21.95■■□□□ 1.1
TRA2A-202ENST00000392502 NEFMP07197 916 aa21.94■■□□□ 1.1
TRA2A-202ENST00000392502 ITSN2Q9NZM3 1697 aa21.94■■□□□ 1.1
TRA2A-202ENST00000392502 CARMIL2Q6F5E8 1435 aa21.94■■□□□ 1.1
TRA2A-202ENST00000392502 PRG4Q92954 1404 aaPredicted RBP21.93■■□□□ 1.1
TRA2A-202ENST00000392502 KDM5BQ9UGL1 1544 aa21.92■■□□□ 1.1
TRA2A-202ENST00000392502 GSE1Q14687 1217 aa21.91■■□□□ 1.1
TRA2A-202ENST00000392502 DAPK1P53355 1430 aa21.9■■□□□ 1.1
TRA2A-202ENST00000392502 JPH4Q96JJ6 628 aa21.9■■□□□ 1.1
TRA2A-202ENST00000392502 ABCC5O15440 1437 aa21.89■■□□□ 1.1
TRA2A-202ENST00000392502 DNMT1P26358 1616 aaKnown RBP21.89■■□□□ 1.1
TRA2A-202ENST00000392502 FOXD1Q16676 465 aa21.87■■□□□ 1.09
TRA2A-202ENST00000392502 BRPF3Q9ULD4 1205 aa21.87■■□□□ 1.09
TRA2A-202ENST00000392502 MPHOSPH9Q99550 1183 aa21.86■■□□□ 1.09
TRA2A-202ENST00000392502 RRP9O43818 475 aaKnown RBP21.86■■□□□ 1.09
TRA2A-202ENST00000392502 TROQ12816 1431 aaPredicted RBP21.85■■□□□ 1.09
TRA2A-202ENST00000392502 ROCK1Q13464 1354 aa21.84■■□□□ 1.09
TRA2A-202ENST00000392502 KIF14Q15058 1648 aa21.84■■□□□ 1.09
TRA2A-202ENST00000392502 ABCA8O94911 1581 aa21.84■■□□□ 1.09
TRA2A-202ENST00000392502 CLASP1Q7Z460 1538 aa21.81■■□□□ 1.08
TRA2A-202ENST00000392502 ADGBQ8N7X0 1667 aa21.8■■□□□ 1.08
TRA2A-202ENST00000392502 CAMSAP2Q08AD1 1489 aa21.79■■□□□ 1.08
TRA2A-202ENST00000392502 GPATCH8Q9UKJ3 1502 aaKnown RBP21.79■■□□□ 1.08
TRA2A-202ENST00000392502 CFDP1Q9UEE9 299 aaPredicted RBP21.78■■□□□ 1.08
TRA2A-202ENST00000392502 IRX6P78412 446 aaPredicted RBP21.78■■□□□ 1.08
TRA2A-202ENST00000392502 CROCC2H7BZ55 1655 aa21.77■■□□□ 1.08
TRA2A-202ENST00000392502 ZNF777Q9ULD5 760 aaPredicted RBP21.77■■□□□ 1.08
TRA2A-202ENST00000392502 B4GALNT3Q6L9W6 998 aa21.75■■□□□ 1.07
TRA2A-202ENST00000392502 SHROOM2Q13796 1616 aa21.75■■□□□ 1.07
TRA2A-202ENST00000392502 HNRNPUQ00839 825 aaKnown RBP eCLIP21.75■■□□□ 1.078e-8■□□□□ 9
TRA2A-202ENST00000392502 HSP90AA2PQ14568 343 aaPredicted RBP21.73■■□□□ 1.07
TRA2A-202ENST00000392502 OSCARQ8IYS5 282 aa21.72■■□□□ 1.07
TRA2A-202ENST00000392502 L3MBTL2Q969R5 705 aa21.72■■□□□ 1.07
TRA2A-202ENST00000392502 ATP10BO94823 1461 aa21.71■■□□□ 1.07
TRA2A-202ENST00000392502 ANKRD30BQ9BXX2 1392 aa21.71■■□□□ 1.07
TRA2A-202ENST00000392502 HSPA5P11021 654 aaKnown RBP21.68■■□□□ 1.06
TRA2A-202ENST00000392502 SLC4A1APQ9BWU0 796 aaKnown RBP21.68■■□□□ 1.06
TRA2A-202ENST00000392502 NCOA1Q15788 1441 aa21.68■■□□□ 1.06
TRA2A-202ENST00000392502 CDC42BPAQ5VT25 1732 aa21.68■■□□□ 1.06
TRA2A-202ENST00000392502 ADGRL2O95490 1459 aa21.68■■□□□ 1.06
TRA2A-202ENST00000392502 FGD1P98174 961 aa21.67■■□□□ 1.06
TRA2A-202ENST00000392502 PLEKHD1A6NEE1 506 aa21.66■■□□□ 1.06
TRA2A-202ENST00000392502 PZPP20742 1482 aa21.65■■□□□ 1.06
TRA2A-202ENST00000392502 ABCC10Q5T3U5 1492 aa21.65■■□□□ 1.06
TRA2A-202ENST00000392502 RPRD2Q5VT52 1461 aaKnown RBP21.65■■□□□ 1.06
TRA2A-202ENST00000392502 SHANK2Q9UPX8 1470 aa21.64■■□□□ 1.05
TRA2A-202ENST00000392502 DDRGK1Q96HY6 314 aa21.63■■□□□ 1.05
TRA2A-202ENST00000392502 NBPF8Q3BBV2 869 aa21.62■■□□□ 1.05
TRA2A-202ENST00000392502 TEX14Q8IWB6 1497 aa21.62■■□□□ 1.05
TRA2A-202ENST00000392502 HSP90AA1P07900 732 aaKnown RBP21.61■■□□□ 1.05
TRA2A-202ENST00000392502 AAMPQ13685 434 aa21.61■■□□□ 1.05
TRA2A-202ENST00000392502 ERCC6L2Q5T890 1561 aa21.6■■□□□ 1.05
TRA2A-202ENST00000392502 PTPRGP23470 1445 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms