RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 KIF14Q15058 1648 aa10.58□□□□□ -0.72
UBBP1-201ENST00000392399 DCAF8L1A6NGE4 600 aa10.58□□□□□ -0.72
UBBP1-201ENST00000392399 EFCAB2Q5VUJ9 269 aa10.58□□□□□ -0.72
UBBP1-201ENST00000392399 TSPOAP1O95153 1857 aa10.57□□□□□ -0.72
UBBP1-201ENST00000392399 TIAM1Q13009 1591 aa10.57□□□□□ -0.72
UBBP1-201ENST00000392399 NEO1Q92859 1461 aa10.56□□□□□ -0.72
UBBP1-201ENST00000392399 EHBP1L1Q8N3D4 1523 aa10.56□□□□□ -0.72
UBBP1-201ENST00000392399 ARAP3Q8WWN8 1544 aa10.56□□□□□ -0.72
UBBP1-201ENST00000392399 PPRC1Q5VV67 1664 aaKnown RBP10.56□□□□□ -0.72
UBBP1-201ENST00000392399 LRRC9Q6ZRR7 1453 aa10.55□□□□□ -0.72
UBBP1-201ENST00000392399 CCNB3Q8WWL7 1395 aa10.54□□□□□ -0.72
UBBP1-201ENST00000392399 KANK4Q5T7N3 995 aaPredicted RBP10.54□□□□□ -0.72
UBBP1-201ENST00000392399 TTC37Q6PGP7 1564 aa10.54□□□□□ -0.72
UBBP1-201ENST00000392399 FANCAO15360 1455 aa10.54□□□□□ -0.72
UBBP1-201ENST00000392399 AKNAQ7Z591 1439 aa10.53□□□□□ -0.72
UBBP1-201ENST00000392399 CFDP1Q9UEE9 299 aaPredicted RBP10.52□□□□□ -0.73
UBBP1-201ENST00000392399 GPATCH8Q9UKJ3 1502 aaKnown RBP10.52□□□□□ -0.73
UBBP1-201ENST00000392399 CFAP74Q9C0B2 1584 aa10.52□□□□□ -0.73
UBBP1-201ENST00000392399 KDM6BO15054 1643 aa10.51□□□□□ -0.73
UBBP1-201ENST00000392399 MYO5CQ9NQX4 1742 aa10.51□□□□□ -0.73
UBBP1-201ENST00000392399 SUPT6HQ7KZ85 1726 aaKnown RBP10.5□□□□□ -0.73
UBBP1-201ENST00000392399 NCOA2Q15596 1464 aa10.5□□□□□ -0.73
UBBP1-201ENST00000392399 COL17A1Q9UMD9 1497 aaPredicted RBP10.5□□□□□ -0.73
UBBP1-201ENST00000392399 ARHGAP5Q13017 1502 aa10.5□□□□□ -0.73
UBBP1-201ENST00000392399 SCAPERQ9BY12 1400 aa10.49□□□□□ -0.73
UBBP1-201ENST00000392399 DENND4BO75064 1496 aaPredicted RBP10.49□□□□□ -0.73
UBBP1-201ENST00000392399 PREX2Q70Z35 1606 aa10.48□□□□□ -0.73
UBBP1-201ENST00000392399 RAPGEF3O95398 923 aa10.48□□□□□ -0.73
UBBP1-201ENST00000392399 ADGRL1O94910 1474 aa10.48□□□□□ -0.73
UBBP1-201ENST00000392399 PLEKHH2Q8IVE3 1493 aa10.48□□□□□ -0.73
UBBP1-201ENST00000392399 RSPH4AQ5TD94 716 aa10.47□□□□□ -0.73
UBBP1-201ENST00000392399 ZNF777Q9ULD5 760 aaPredicted RBP10.47□□□□□ -0.73
UBBP1-201ENST00000392399 KIAA1107Q9UPP5 1409 aa10.47□□□□□ -0.73
UBBP1-201ENST00000392399 CDC42BPAQ5VT25 1732 aa10.47□□□□□ -0.73
UBBP1-201ENST00000392399 CDC42BPBQ9Y5S2 1711 aa10.47□□□□□ -0.73
UBBP1-201ENST00000392399 MIA2Q96PC5 1412 aa10.46□□□□□ -0.74
UBBP1-201ENST00000392399 MYOM3Q5VTT5 1437 aa10.45□□□□□ -0.74
UBBP1-201ENST00000392399 ITSN2Q9NZM3 1697 aa10.44□□□□□ -0.74
UBBP1-201ENST00000392399 ZNF518AQ6AHZ1 1483 aa10.43□□□□□ -0.74
UBBP1-201ENST00000392399 MAGI2Q86UL8 1455 aa10.43□□□□□ -0.74
UBBP1-201ENST00000392399 POGZQ7Z3K3 1410 aa10.43□□□□□ -0.74
UBBP1-201ENST00000392399 HNRNPMP52272 730 aaKnown RBP eCLIP10.43□□□□□ -0.74
UBBP1-201ENST00000392399 AFAP1Q8N556 730 aa10.43□□□□□ -0.74
UBBP1-201ENST00000392399 ZNF644Q9H582 1327 aaPredicted RBP10.42□□□□□ -0.74
UBBP1-201ENST00000392399 ABCC1P33527 1531 aa10.42□□□□□ -0.74
UBBP1-201ENST00000392399 SAMD9LQ8IVG5 1584 aa10.41□□□□□ -0.74
UBBP1-201ENST00000392399 NPM3O75607 178 aaKnown RBP10.41□□□□□ -0.74
UBBP1-201ENST00000392399 ARHGEF12Q9NZN5 1544 aa10.41□□□□□ -0.74
UBBP1-201ENST00000392399 TRAPPC8Q9Y2L5 1435 aa10.41□□□□□ -0.74
UBBP1-201ENST00000392399 ZMYM4Q5VZL5 1548 aa10.4□□□□□ -0.74
UBBP1-201ENST00000392399 TSPY4P0CV99 314 aa10.4□□□□□ -0.74
UBBP1-201ENST00000392399 TSPY10P0CW01 314 aa10.4□□□□□ -0.74
UBBP1-201ENST00000392399 RICTORQ6R327 1708 aa10.4□□□□□ -0.74
UBBP1-201ENST00000392399 MBD5Q9P267 1494 aa10.4□□□□□ -0.74
UBBP1-201ENST00000392399 MLH3Q9UHC1 1453 aa10.4□□□□□ -0.74
UBBP1-201ENST00000392399 SPAG9O60271 1321 aaKnown RBP10.39□□□□□ -0.75
UBBP1-201ENST00000392399 RNF39Q9H2S5 420 aa10.39□□□□□ -0.75
UBBP1-201ENST00000392399 MYT1LQ9UL68 1186 aa10.39□□□□□ -0.75
UBBP1-201ENST00000392399 FGD6Q6ZV73 1430 aa10.39□□□□□ -0.75
UBBP1-201ENST00000392399 FRMPD1Q5SYB0 1578 aa10.39□□□□□ -0.75
UBBP1-201ENST00000392399 SYCP2Q9BX26 1530 aa10.38□□□□□ -0.75
UBBP1-201ENST00000392399 CAMSAP2Q08AD1 1489 aa10.38□□□□□ -0.75
UBBP1-201ENST00000392399 PPARGC1BQ86YN6 1023 aaKnown RBP10.38□□□□□ -0.75
UBBP1-201ENST00000392399 KDM5CP41229 1560 aa10.38□□□□□ -0.75
UBBP1-201ENST00000392399 RTEL1-TNFRSF6BF6WH68 1400 aa10.37□□□□□ -0.75
UBBP1-201ENST00000392399 CACNB1Q02641 598 aaPredicted RBP10.37□□□□□ -0.75
UBBP1-201ENST00000392399 TCOF1Q13428 1488 aaKnown RBP10.36□□□□□ -0.75
UBBP1-201ENST00000392399 CCDC141Q6ZP82 1450 aa10.36□□□□□ -0.75
UBBP1-201ENST00000392399 ZFYVE16Q7Z3T8 1539 aa10.36□□□□□ -0.75
UBBP1-201ENST00000392399 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.36□□□□□ -0.75
UBBP1-201ENST00000392399 ATP10AO60312 1499 aa10.36□□□□□ -0.75
UBBP1-201ENST00000392399 ARHGEF5Q12774 1597 aa10.35□□□□□ -0.75
UBBP1-201ENST00000392399 PTPN23Q9H3S7 1636 aa10.35□□□□□ -0.75
UBBP1-201ENST00000392399 YEATS2Q9ULM3 1422 aa10.34□□□□□ -0.75
UBBP1-201ENST00000392399 FAM50AQ14320 339 aaKnown RBP10.34□□□□□ -0.75
UBBP1-201ENST00000392399 HECW2Q9P2P5 1572 aa10.34□□□□□ -0.75
UBBP1-201ENST00000392399 ARHGEF40Q8TER5 1519 aa10.33□□□□□ -0.76
UBBP1-201ENST00000392399 C9orf84Q5VXU9 1444 aa10.33□□□□□ -0.76
UBBP1-201ENST00000392399 ARID4BQ4LE39 1312 aaPredicted RBP10.33□□□□□ -0.76
UBBP1-201ENST00000392399 ABCC5O15440 1437 aa10.32□□□□□ -0.76
UBBP1-201ENST00000392399 ATP7AQ04656 1500 aa10.31□□□□□ -0.76
UBBP1-201ENST00000392399 KIDINS220Q9ULH0 1771 aa10.31□□□□□ -0.76
UBBP1-201ENST00000392399 RRBP1Q9P2E9 1410 aaKnown RBP10.31□□□□□ -0.76
UBBP1-201ENST00000392399 REREQ9P2R6 1566 aa10.31□□□□□ -0.76
UBBP1-201ENST00000392399 DHX29Q7Z478 1369 aaKnown RBP10.3□□□□□ -0.76
UBBP1-201ENST00000392399 DAPK1P53355 1430 aa10.3□□□□□ -0.76
UBBP1-201ENST00000392399 INO80Q9ULG1 1556 aaPredicted RBP10.3□□□□□ -0.76
UBBP1-201ENST00000392399 MAST1Q9Y2H9 1570 aa10.3□□□□□ -0.76
UBBP1-201ENST00000392399 SHANK2Q9UPX8 1470 aa10.3□□□□□ -0.76
UBBP1-201ENST00000392399 DIP2CQ9Y2E4 1556 aa10.29□□□□□ -0.76
UBBP1-201ENST00000392399 A2MP01023 1474 aa10.29□□□□□ -0.76
UBBP1-201ENST00000392399 DNMT1P26358 1616 aaKnown RBP10.29□□□□□ -0.76
UBBP1-201ENST00000392399 AGLP35573 1532 aa10.28□□□□□ -0.76
UBBP1-201ENST00000392399 ANKRD30AQ9BXX3 1397 aa10.28□□□□□ -0.76
UBBP1-201ENST00000392399 ABCA6Q8N139 1617 aa10.28□□□□□ -0.76
UBBP1-201ENST00000392399 KDM4FA0A1W2PPD8 638 aa10.27□□□□□ -0.77
UBBP1-201ENST00000392399 NCOA1Q15788 1441 aa10.26□□□□□ -0.77
UBBP1-201ENST00000392399 CHIC2Q9UKJ5 165 aa10.26□□□□□ -0.77
UBBP1-201ENST00000392399 ADGBQ8N7X0 1667 aa10.25□□□□□ -0.77
UBBP1-201ENST00000392399 ADGRL2O95490 1459 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms