RNA–Protein interactions for RNA: ENST00000391052.1

RNU6-1242P-201, Transcript of RNA, U6 small nuclear 1242, pseudogene, humanhuman

BASIC

Gene RNU6-1242P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1242P-201ENST00000391052 WDR70Q9NW82 654 aa11.47□□□□□ -0.57
RNU6-1242P-201ENST00000391052 TSHZ2Q9NRE2 1034 aa11.44□□□□□ -0.58
RNU6-1242P-201ENST00000391052 POTEJP0CG39 1038 aa11.42□□□□□ -0.58
RNU6-1242P-201ENST00000391052 SNPHO15079 494 aa11.41□□□□□ -0.58
RNU6-1242P-201ENST00000391052 GPHNQ9NQX3 736 aaPredicted RBP11.41□□□□□ -0.58
RNU6-1242P-201ENST00000391052 LARP6Q9BRS8 491 aaKnown RBP11.4□□□□□ -0.58
RNU6-1242P-201ENST00000391052 C2orf72A6NCS6 295 aa11.38□□□□□ -0.59
RNU6-1242P-201ENST00000391052 OTUD5Q96G74 571 aa11.38□□□□□ -0.59
RNU6-1242P-201ENST00000391052 DDX27Q96GQ7 796 aaKnown RBP11.38□□□□□ -0.59
RNU6-1242P-201ENST00000391052 CRISPLD2Q9H0B8 497 aa11.37□□□□□ -0.59
RNU6-1242P-201ENST00000391052 VSIG10Q8N0Z9 540 aa11.36□□□□□ -0.59
RNU6-1242P-201ENST00000391052 CADPS2Q86UW7 1296 aa11.35□□□□□ -0.59
RNU6-1242P-201ENST00000391052 RIMBP2O15034 1052 aa11.34□□□□□ -0.59
RNU6-1242P-201ENST00000391052 SLC24A1O60721 1099 aa11.34□□□□□ -0.59
RNU6-1242P-201ENST00000391052 FOXK1P85037 733 aa11.34□□□□□ -0.59
RNU6-1242P-201ENST00000391052 PPP1R15BQ5SWA1 713 aa11.34□□□□□ -0.59
RNU6-1242P-201ENST00000391052 DOK7Q18PE1 504 aa11.33□□□□□ -0.6
RNU6-1242P-201ENST00000391052 NCKAP5LQ9HCH0 1330 aa11.33□□□□□ -0.6
RNU6-1242P-201ENST00000391052 KIF3CO14782 793 aa11.32□□□□□ -0.6
RNU6-1242P-201ENST00000391052 TMEM92Q6UXU6 159 aa11.32□□□□□ -0.6
RNU6-1242P-201ENST00000391052 PLPP6Q8IY26 295 aa11.31□□□□□ -0.6
RNU6-1242P-201ENST00000391052 DSG2Q14126 1118 aa11.3□□□□□ -0.6
RNU6-1242P-201ENST00000391052 MFSD10Q14728 455 aa11.3□□□□□ -0.6
RNU6-1242P-201ENST00000391052 ZNF710Q8N1W2 664 aa11.3□□□□□ -0.6
RNU6-1242P-201ENST00000391052 TBC1D12O60347 775 aa11.28□□□□□ -0.6
RNU6-1242P-201ENST00000391052 P3H3Q8IVL6 736 aa11.27□□□□□ -0.61
RNU6-1242P-201ENST00000391052 ZNF316A6NFI3 1004 aaPredicted RBP11.25□□□□□ -0.61
RNU6-1242P-201ENST00000391052 E2F4Q16254 413 aa11.25□□□□□ -0.61
RNU6-1242P-201ENST00000391052 ZSWIM6Q9HCJ5 1215 aa11.22□□□□□ -0.61
RNU6-1242P-201ENST00000391052 SLC34A2O95436 690 aa11.21□□□□□ -0.61
RNU6-1242P-201ENST00000391052 MAP3K9P80192 1104 aa11.19□□□□□ -0.62
RNU6-1242P-201ENST00000391052 UPF1Q92900 1129 aaKnown RBP eCLIP11.17□□□□□ -0.62
RNU6-1242P-201ENST00000391052 FAM163AQ96GL9 167 aaPredicted RBP11.17□□□□□ -0.62
RNU6-1242P-201ENST00000391052 CAMK2BQ13554 666 aa11.16□□□□□ -0.62
RNU6-1242P-201ENST00000391052 KDM2AQ9Y2K7 1162 aa11.16□□□□□ -0.62
RNU6-1242P-201ENST00000391052 PTCD2Q8WV60 388 aaKnown RBP11.15□□□□□ -0.62
RNU6-1242P-201ENST00000391052 HOXB3P14651 431 aaPredicted RBP11.14□□□□□ -0.63
RNU6-1242P-201ENST00000391052 PCDHGA4Q9Y5G9 962 aa11.13□□□□□ -0.63
RNU6-1242P-201ENST00000391052 OXER1Q8TDS5 423 aa11.12□□□□□ -0.63
RNU6-1242P-201ENST00000391052 ARHGEF1Q92888 912 aaKnown RBP11.12□□□□□ -0.63
RNU6-1242P-201ENST00000391052 SPDYE16A6NNV3 312 aaPredicted RBP11.09□□□□□ -0.63
RNU6-1242P-201ENST00000391052 HOXB1P14653 301 aaPredicted RBP11.09□□□□□ -0.63
RNU6-1242P-201ENST00000391052 ARSIQ5FYB1 569 aa11.09□□□□□ -0.63
RNU6-1242P-201ENST00000391052 KCNV2Q8TDN2 545 aa11.08□□□□□ -0.64
RNU6-1242P-201ENST00000391052 EMILIN3Q9NT22 766 aa11.08□□□□□ -0.64
RNU6-1242P-201ENST00000391052 DPYSL4O14531 572 aa11.07□□□□□ -0.64
RNU6-1242P-201ENST00000391052 ST18O60284 1047 aa11.07□□□□□ -0.64
RNU6-1242P-201ENST00000391052 ARIH1Q9Y4X5 557 aaPredicted RBP11.07□□□□□ -0.64
RNU6-1242P-201ENST00000391052 GPR153Q6NV75 609 aa11.06□□□□□ -0.64
RNU6-1242P-201ENST00000391052 PSDA5PKW4 1024 aaPredicted RBP11.05□□□□□ -0.64
RNU6-1242P-201ENST00000391052 EVI5O60447 810 aa11.05□□□□□ -0.64
RNU6-1242P-201ENST00000391052 EMP3P54852 163 aa11.05□□□□□ -0.64
RNU6-1242P-201ENST00000391052 NUDT7P0C024 238 aa11.04□□□□□ -0.64
RNU6-1242P-201ENST00000391052 NBR1Q14596 966 aa11.04□□□□□ -0.64
RNU6-1242P-201ENST00000391052 TULP1O00294 542 aaPredicted RBP11.02□□□□□ -0.65
RNU6-1242P-201ENST00000391052 ERBB3P21860 1342 aa11.02□□□□□ -0.65
RNU6-1242P-201ENST00000391052 PDIA6Q15084 440 aa11□□□□□ -0.65
RNU6-1242P-201ENST00000391052 SMYD5Q6GMV2 418 aa10.98□□□□□ -0.65
RNU6-1242P-201ENST00000391052 KHSRPQ92945 711 aaKnown RBP eCLIP10.98□□□□□ -0.65
RNU6-1242P-201ENST00000391052 MARVELD3Q96A59 401 aa10.98□□□□□ -0.65
RNU6-1242P-201ENST00000391052 PPP4R3BQ5MIZ7 849 aa10.96□□□□□ -0.65
RNU6-1242P-201ENST00000391052 KCNH8Q96L42 1107 aa10.96□□□□□ -0.65
RNU6-1242P-201ENST00000391052 ANO8Q9HCE9 1232 aaPredicted RBP10.96□□□□□ -0.65
RNU6-1242P-201ENST00000391052 LHX6Q9UPM6 363 aa10.95□□□□□ -0.66
RNU6-1242P-201ENST00000391052 FAM205CA6NFA0 338 aa10.94□□□□□ -0.66
RNU6-1242P-201ENST00000391052 ZNF454Q8N9F8 522 aa10.93□□□□□ -0.66
RNU6-1242P-201ENST00000391052 EPAS1Q99814 870 aa10.93□□□□□ -0.66
RNU6-1242P-201ENST00000391052 PHF14O94880 888 aa10.92□□□□□ -0.66
RNU6-1242P-201ENST00000391052 PTGER2P43116 358 aa10.92□□□□□ -0.66
RNU6-1242P-201ENST00000391052 VARS2Q5ST30 1063 aaKnown RBP10.92□□□□□ -0.66
RNU6-1242P-201ENST00000391052 JPH4Q96JJ6 628 aa10.92□□□□□ -0.66
RNU6-1242P-201ENST00000391052 FBXW7Q969H0 707 aa10.91□□□□□ -0.66
RNU6-1242P-201ENST00000391052 GRXCR2A6NFK2 248 aa10.9□□□□□ -0.66
RNU6-1242P-201ENST00000391052 DDX12PQ92771 950 aa10.9□□□□□ -0.66
RNU6-1242P-201ENST00000391052 BCANQ96GW7 911 aa10.9□□□□□ -0.66
RNU6-1242P-201ENST00000391052 KDM4FA0A1W2PPD8 638 aa10.89□□□□□ -0.67
RNU6-1242P-201ENST00000391052 TYW1BQ6NUM6 668 aa10.89□□□□□ -0.67
RNU6-1242P-201ENST00000391052 ZDHHC16Q969W1 377 aa10.88□□□□□ -0.67
RNU6-1242P-201ENST00000391052 SEMA3EO15041 775 aa10.87□□□□□ -0.67
RNU6-1242P-201ENST00000391052 FOSBP53539 338 aa10.87□□□□□ -0.67
RNU6-1242P-201ENST00000391052 HS3ST6Q96QI5 342 aa10.87□□□□□ -0.67
RNU6-1242P-201ENST00000391052 POTEMA6NI47 508 aa10.86□□□□□ -0.67
RNU6-1242P-201ENST00000391052 POTEGQ6S5H5 508 aa10.86□□□□□ -0.67
RNU6-1242P-201ENST00000391052 LCE2DQ5TA82 110 aaPredicted RBP10.85□□□□□ -0.67
RNU6-1242P-201ENST00000391052 PBX2P40425 430 aa10.84□□□□□ -0.67
RNU6-1242P-201ENST00000391052 TESPA1A2RU30 521 aaPredicted RBP10.83□□□□□ -0.68
RNU6-1242P-201ENST00000391052 ZNF687Q8N1G0 1237 aa10.83□□□□□ -0.68
RNU6-1242P-201ENST00000391052 PCDHGA10Q9Y5H3 936 aa10.83□□□□□ -0.68
RNU6-1242P-201ENST00000391052 MAP3K7O43318 606 aa10.82□□□□□ -0.68
RNU6-1242P-201ENST00000391052 PTPREP23469 700 aa10.82□□□□□ -0.68
RNU6-1242P-201ENST00000391052 RBM33Q96EV2 1170 aaKnown RBP10.81□□□□□ -0.68
RNU6-1242P-201ENST00000391052 MLLT3P42568 568 aaPredicted RBP10.8□□□□□ -0.68
RNU6-1242P-201ENST00000391052 BCL2L12Q9HB09 334 aa10.8□□□□□ -0.68
RNU6-1242P-201ENST00000391052 EN1Q05925 392 aaPredicted RBP10.79□□□□□ -0.68
RNU6-1242P-201ENST00000391052 PCDH10Q9P2E7 1040 aa10.79□□□□□ -0.68
RNU6-1242P-201ENST00000391052 ARHGAP33O14559 1287 aa10.78□□□□□ -0.68
RNU6-1242P-201ENST00000391052 KCNK17Q96T54 332 aa10.77□□□□□ -0.69
RNU6-1242P-201ENST00000391052 OSBPP22059 807 aa10.76□□□□□ -0.69
RNU6-1242P-201ENST00000391052 CERKQ8TCT0 537 aa10.76□□□□□ -0.69
RNU6-1242P-201ENST00000391052 ADAM33Q9BZ11 813 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms