RNA–Protein interactions for RNA: ENST00000390438.2

TRAV8-4-201, Transcript of T cell receptor alpha variable 8-4, humanhuman

APPRIS P1 BASIC

Gene TRAV8-4, Length 469 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4-201ENST00000390438 ZNF518AQ6AHZ1 1483 aa9.89□□□□□ -0.83
TRAV8-4-201ENST00000390438 VPS8Q8N3P4 1428 aa9.89□□□□□ -0.83
TRAV8-4-201ENST00000390438 PREX2Q70Z35 1606 aa9.89□□□□□ -0.83
TRAV8-4-201ENST00000390438 POGZQ7Z3K3 1410 aa9.88□□□□□ -0.83
TRAV8-4-201ENST00000390438 SCAPERQ9BY12 1400 aa9.88□□□□□ -0.83
TRAV8-4-201ENST00000390438 ARHGEF40Q8TER5 1519 aa9.87□□□□□ -0.83
TRAV8-4-201ENST00000390438 PLEKHH2Q8IVE3 1493 aa9.87□□□□□ -0.83
TRAV8-4-201ENST00000390438 RAPGEF3O95398 923 aa9.87□□□□□ -0.83
TRAV8-4-201ENST00000390438 RICTORQ6R327 1708 aa9.87□□□□□ -0.83
TRAV8-4-201ENST00000390438 CCNB3Q8WWL7 1395 aa9.87□□□□□ -0.83
TRAV8-4-201ENST00000390438 FRMPD1Q5SYB0 1578 aa9.86□□□□□ -0.83
TRAV8-4-201ENST00000390438 ZFYVE16Q7Z3T8 1539 aa9.86□□□□□ -0.83
TRAV8-4-201ENST00000390438 LOC105371045A0A1W2PR82 267 aa9.85□□□□□ -0.83
TRAV8-4-201ENST00000390438 APLP2Q06481 763 aa9.85□□□□□ -0.83
TRAV8-4-201ENST00000390438 MAP3K1Q13233 1512 aa9.85□□□□□ -0.83
TRAV8-4-201ENST00000390438 ITSN2Q9NZM3 1697 aa9.84□□□□□ -0.83
TRAV8-4-201ENST00000390438 ARID4BQ4LE39 1312 aaPredicted RBP9.83□□□□□ -0.84
TRAV8-4-201ENST00000390438 ABCC1P33527 1531 aa9.83□□□□□ -0.84
TRAV8-4-201ENST00000390438 SUPT6HQ7KZ85 1726 aaKnown RBP9.83□□□□□ -0.84
TRAV8-4-201ENST00000390438 KDM4FA0A1W2PPD8 638 aa9.83□□□□□ -0.84
TRAV8-4-201ENST00000390438 CFDP1Q9UEE9 299 aaPredicted RBP9.83□□□□□ -0.84
TRAV8-4-201ENST00000390438 TIAM1Q13009 1591 aa9.83□□□□□ -0.84
TRAV8-4-201ENST00000390438 KIAA1107Q9UPP5 1409 aa9.82□□□□□ -0.84
TRAV8-4-201ENST00000390438 CDC42BPAQ5VT25 1732 aa9.82□□□□□ -0.84
TRAV8-4-201ENST00000390438 CDC42BPBQ9Y5S2 1711 aa9.82□□□□□ -0.84
TRAV8-4-201ENST00000390438 MYT1LQ9UL68 1186 aa9.82□□□□□ -0.84
TRAV8-4-201ENST00000390438 KDM5CP41229 1560 aa9.82□□□□□ -0.84
TRAV8-4-201ENST00000390438 GPATCH8Q9UKJ3 1502 aaKnown RBP9.82□□□□□ -0.84
TRAV8-4-201ENST00000390438 C9orf84Q5VXU9 1444 aa9.82□□□□□ -0.84
TRAV8-4-201ENST00000390438 HECW2Q9P2P5 1572 aa9.81□□□□□ -0.84
TRAV8-4-201ENST00000390438 ATP10AO60312 1499 aa9.8□□□□□ -0.84
TRAV8-4-201ENST00000390438 MLH3Q9UHC1 1453 aa9.8□□□□□ -0.84
TRAV8-4-201ENST00000390438 RSPH4AQ5TD94 716 aa9.79□□□□□ -0.84
TRAV8-4-201ENST00000390438 ZNF777Q9ULD5 760 aaPredicted RBP9.79□□□□□ -0.84
TRAV8-4-201ENST00000390438 REREQ9P2R6 1566 aa9.79□□□□□ -0.84
TRAV8-4-201ENST00000390438 NCOA2Q15596 1464 aa9.79□□□□□ -0.84
TRAV8-4-201ENST00000390438 LRRC9Q6ZRR7 1453 aa9.79□□□□□ -0.84
TRAV8-4-201ENST00000390438 BCORL1Q5H9F3 1711 aa9.78□□□□□ -0.84
TRAV8-4-201ENST00000390438 SYCP2Q9BX26 1530 aa9.77□□□□□ -0.84
TRAV8-4-201ENST00000390438 SAMD9LQ8IVG5 1584 aa9.77□□□□□ -0.85
TRAV8-4-201ENST00000390438 YEATS2Q9ULM3 1422 aa9.77□□□□□ -0.85
TRAV8-4-201ENST00000390438 AFAP1Q8N556 730 aa9.77□□□□□ -0.85
TRAV8-4-201ENST00000390438 SPAG9O60271 1321 aaKnown RBP9.77□□□□□ -0.85
TRAV8-4-201ENST00000390438 ADAMTSL3P82987 1691 aa9.76□□□□□ -0.85
TRAV8-4-201ENST00000390438 TRAPPC8Q9Y2L5 1435 aa9.75□□□□□ -0.85
TRAV8-4-201ENST00000390438 DIP2CQ9Y2E4 1556 aa9.75□□□□□ -0.85
TRAV8-4-201ENST00000390438 MIA2Q96PC5 1412 aa9.74□□□□□ -0.85
TRAV8-4-201ENST00000390438 AGLP35573 1532 aa9.74□□□□□ -0.85
TRAV8-4-201ENST00000390438 ARHGEF12Q9NZN5 1544 aa9.74□□□□□ -0.85
TRAV8-4-201ENST00000390438 ESF1Q9H501 851 aaKnown RBP9.74□□□□□ -0.85
TRAV8-4-201ENST00000390438 RTEL1-TNFRSF6BF6WH68 1400 aa9.73□□□□□ -0.85
TRAV8-4-201ENST00000390438 PTPRMP28827 1452 aa9.73□□□□□ -0.85
TRAV8-4-201ENST00000390438 CCDC141Q6ZP82 1450 aa9.73□□□□□ -0.85
TRAV8-4-201ENST00000390438 ATP7AQ04656 1500 aa9.73□□□□□ -0.85
TRAV8-4-201ENST00000390438 CAMSAP2Q08AD1 1489 aa9.72□□□□□ -0.85
TRAV8-4-201ENST00000390438 ABCA6Q8N139 1617 aa9.72□□□□□ -0.85
TRAV8-4-201ENST00000390438 MADDQ8WXG6 1647 aa9.72□□□□□ -0.85
TRAV8-4-201ENST00000390438 TSPY4P0CV99 314 aa9.72□□□□□ -0.85
TRAV8-4-201ENST00000390438 TSPY10P0CW01 314 aa9.72□□□□□ -0.85
TRAV8-4-201ENST00000390438 HNRNPMP52272 730 aaKnown RBP eCLIP9.72□□□□□ -0.85
TRAV8-4-201ENST00000390438 MYOM3Q5VTT5 1437 aa9.72□□□□□ -0.85
TRAV8-4-201ENST00000390438 CNTLNQ9NXG0 1405 aa9.72□□□□□ -0.85
TRAV8-4-201ENST00000390438 ARHGEF5Q12774 1597 aa9.71□□□□□ -0.85
TRAV8-4-201ENST00000390438 INO80Q9ULG1 1556 aaPredicted RBP9.71□□□□□ -0.85
TRAV8-4-201ENST00000390438 KIDINS220Q9ULH0 1771 aa9.71□□□□□ -0.85
TRAV8-4-201ENST00000390438 FER1L4A9Z1Z3 1794 aa9.7□□□□□ -0.86
TRAV8-4-201ENST00000390438 PPP6R1Q9UPN7 881 aa9.7□□□□□ -0.86
TRAV8-4-201ENST00000390438 A2MP01023 1474 aa9.7□□□□□ -0.86
TRAV8-4-201ENST00000390438 MBD5Q9P267 1494 aa9.7□□□□□ -0.86
TRAV8-4-201ENST00000390438 RIMS1Q86UR5 1692 aaKnown RBP9.7□□□□□ -0.86
TRAV8-4-201ENST00000390438 ADGBQ8N7X0 1667 aa9.7□□□□□ -0.86
TRAV8-4-201ENST00000390438 MLECQ14165 292 aa9.69□□□□□ -0.86
TRAV8-4-201ENST00000390438 FAM135AQ9P2D6 1515 aa9.67□□□□□ -0.86
TRAV8-4-201ENST00000390438 KANK4Q5T7N3 995 aaPredicted RBP9.67□□□□□ -0.86
TRAV8-4-201ENST00000390438 PLXNC1O60486 1568 aa9.67□□□□□ -0.86
TRAV8-4-201ENST00000390438 DHX29Q7Z478 1369 aaKnown RBP9.66□□□□□ -0.86
TRAV8-4-201ENST00000390438 ZNF644Q9H582 1327 aaPredicted RBP9.66□□□□□ -0.86
TRAV8-4-201ENST00000390438 MAST1Q9Y2H9 1570 aa9.66□□□□□ -0.86
TRAV8-4-201ENST00000390438 SHANK2Q9UPX8 1470 aa9.65□□□□□ -0.87
TRAV8-4-201ENST00000390438 FGD6Q6ZV73 1430 aa9.65□□□□□ -0.87
TRAV8-4-201ENST00000390438 SIGLEC1Q9BZZ2 1709 aa9.64□□□□□ -0.87
TRAV8-4-201ENST00000390438 MROH2AA6NES4 1674 aa9.64□□□□□ -0.87
TRAV8-4-201ENST00000390438 PTPN23Q9H3S7 1636 aa9.64□□□□□ -0.87
TRAV8-4-201ENST00000390438 TCOF1Q13428 1488 aaKnown RBP9.63□□□□□ -0.87
TRAV8-4-201ENST00000390438 UHRF1BP1Q6BDS2 1440 aa9.63□□□□□ -0.87
TRAV8-4-201ENST00000390438 SETD1BQ9UPS6 1966 aaKnown RBP9.63□□□□□ -0.87
TRAV8-4-201ENST00000390438 NPATQ14207 1427 aa9.62□□□□□ -0.87
TRAV8-4-201ENST00000390438 EIF2AK4Q9P2K8 1649 aaKnown RBP9.61□□□□□ -0.87
TRAV8-4-201ENST00000390438 FOXD1Q16676 465 aa9.61□□□□□ -0.87
TRAV8-4-201ENST00000390438 GGT6Q6P531 493 aa9.61□□□□□ -0.87
TRAV8-4-201ENST00000390438 DUOX2Q9NRD8 1548 aa9.61□□□□□ -0.87
TRAV8-4-201ENST00000390438 PREX1Q8TCU6 1659 aa9.61□□□□□ -0.87
TRAV8-4-201ENST00000390438 PLPPR3Q6T4P5 718 aa9.6□□□□□ -0.87
TRAV8-4-201ENST00000390438 ANKRD30AQ9BXX3 1397 aa9.6□□□□□ -0.87
TRAV8-4-201ENST00000390438 DNMT1P26358 1616 aaKnown RBP9.6□□□□□ -0.87
TRAV8-4-201ENST00000390438 LMTK3Q96Q04 1460 aa9.59□□□□□ -0.87
TRAV8-4-201ENST00000390438 DAPK1P53355 1430 aa9.59□□□□□ -0.87
TRAV8-4-201ENST00000390438 ERBINQ96RT1 1412 aa9.59□□□□□ -0.87
TRAV8-4-201ENST00000390438 CROCC2H7BZ55 1655 aa9.59□□□□□ -0.87
TRAV8-4-201ENST00000390438 KIF3BO15066 747 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms