RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 ARHGAP5Q13017 1502 aa27.35■■□□□ 1.97
CD9-202ENST00000382515 CFAP74Q9C0B2 1584 aa27.33■■□□□ 1.97
CD9-202ENST00000382515 MYO5CQ9NQX4 1742 aa27.31■■□□□ 1.96
CD9-202ENST00000382515 RSPH4AQ5TD94 716 aa27.31■■□□□ 1.96
CD9-202ENST00000382515 ZNF777Q9ULD5 760 aaPredicted RBP27.31■■□□□ 1.96
CD9-202ENST00000382515 SCAPERQ9BY12 1400 aa27.31■■□□□ 1.96
CD9-202ENST00000382515 COL17A1Q9UMD9 1497 aaPredicted RBP27.31■■□□□ 1.96
CD9-202ENST00000382515 DENND4BO75064 1496 aaPredicted RBP27.3■■□□□ 1.96
CD9-202ENST00000382515 MIA2Q96PC5 1412 aa27.29■■□□□ 1.96
CD9-202ENST00000382515 KIAA1107Q9UPP5 1409 aa27.29■■□□□ 1.96
CD9-202ENST00000382515 PLEKHH2Q8IVE3 1493 aa27.29■■□□□ 1.96
CD9-202ENST00000382515 KDM6BO15054 1643 aa27.28■■□□□ 1.96
CD9-202ENST00000382515 ADGRL1O94910 1474 aa27.28■■□□□ 1.96
CD9-202ENST00000382515 RAPGEF3O95398 923 aa27.27■■□□□ 1.96
CD9-202ENST00000382515 MYOM3Q5VTT5 1437 aa27.26■■□□□ 1.95
CD9-202ENST00000382515 PREX2Q70Z35 1606 aa27.26■■□□□ 1.95
CD9-202ENST00000382515 CDC42BPBQ9Y5S2 1711 aa27.21■■□□□ 1.95
CD9-202ENST00000382515 CDC42BPAQ5VT25 1732 aa27.21■■□□□ 1.95
CD9-202ENST00000382515 HNRNPMP52272 730 aaKnown RBP eCLIP27.19■■□□□ 1.94
CD9-202ENST00000382515 ZNF644Q9H582 1327 aaPredicted RBP27.18■■□□□ 1.94
CD9-202ENST00000382515 ITSN2Q9NZM3 1697 aa27.18■■□□□ 1.94
CD9-202ENST00000382515 AFAP1Q8N556 730 aa27.18■■□□□ 1.94
CD9-202ENST00000382515 ZNF518AQ6AHZ1 1483 aa27.18■■□□□ 1.94
CD9-202ENST00000382515 POGZQ7Z3K3 1410 aa27.17■■□□□ 1.94
CD9-202ENST00000382515 MAGI2Q86UL8 1455 aa27.15■■□□□ 1.94
CD9-202ENST00000382515 PPARGC1BQ86YN6 1023 aaKnown RBP27.13■■□□□ 1.93
CD9-202ENST00000382515 ABCC1P33527 1531 aa27.12■■□□□ 1.93
CD9-202ENST00000382515 TSPY4P0CV99 314 aa27.12■■□□□ 1.93
CD9-202ENST00000382515 TSPY10P0CW01 314 aa27.12■■□□□ 1.93
CD9-202ENST00000382515 FGD6Q6ZV73 1430 aa27.12■■□□□ 1.93
CD9-202ENST00000382515 ARHGEF12Q9NZN5 1544 aa27.11■■□□□ 1.93
CD9-202ENST00000382515 SAMD9LQ8IVG5 1584 aa27.1■■□□□ 1.93
CD9-202ENST00000382515 TRAPPC8Q9Y2L5 1435 aa27.1■■□□□ 1.93
CD9-202ENST00000382515 MBD5Q9P267 1494 aa27.1■■□□□ 1.93
CD9-202ENST00000382515 SPAG9O60271 1321 aaKnown RBP27.09■■□□□ 1.93
CD9-202ENST00000382515 CAMSAP2Q08AD1 1489 aa27.07■■□□□ 1.92
CD9-202ENST00000382515 MYT1LQ9UL68 1186 aa27.07■■□□□ 1.92
CD9-202ENST00000382515 MLH3Q9UHC1 1453 aa27.06■■□□□ 1.92
CD9-202ENST00000382515 ZMYM4Q5VZL5 1548 aa27.05■■□□□ 1.92
CD9-202ENST00000382515 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.04■■□□□ 1.92
CD9-202ENST00000382515 TCOF1Q13428 1488 aaKnown RBP27.04■■□□□ 1.92
CD9-202ENST00000382515 SYCP2Q9BX26 1530 aa27.04■■□□□ 1.92
CD9-202ENST00000382515 RTEL1-TNFRSF6BF6WH68 1400 aa27.02■■□□□ 1.92
CD9-202ENST00000382515 RICTORQ6R327 1708 aa27.02■■□□□ 1.92
CD9-202ENST00000382515 KDM5CP41229 1560 aa27.01■■□□□ 1.92
CD9-202ENST00000382515 FAM50AQ14320 339 aaKnown RBP27.01■■□□□ 1.91
CD9-202ENST00000382515 FRMPD1Q5SYB0 1578 aa27.01■■□□□ 1.91
CD9-202ENST00000382515 CCDC141Q6ZP82 1450 aa27■■□□□ 1.91
CD9-202ENST00000382515 ARHGEF5Q12774 1597 aa26.97■■□□□ 1.91
CD9-202ENST00000382515 PTPN23Q9H3S7 1636 aa26.96■■□□□ 1.91
CD9-202ENST00000382515 ATP10AO60312 1499 aa26.95■■□□□ 1.91
CD9-202ENST00000382515 ZFYVE16Q7Z3T8 1539 aa26.94■■□□□ 1.9
CD9-202ENST00000382515 YEATS2Q9ULM3 1422 aa26.93■■□□□ 1.9
CD9-202ENST00000382515 RRBP1Q9P2E9 1410 aaKnown RBP26.92■■□□□ 1.9
CD9-202ENST00000382515 ABCC5O15440 1437 aa26.91■■□□□ 1.9
CD9-202ENST00000382515 HECW2Q9P2P5 1572 aa26.89■■□□□ 1.9
CD9-202ENST00000382515 DAPK1P53355 1430 aa26.88■■□□□ 1.89
CD9-202ENST00000382515 C9orf84Q5VXU9 1444 aa26.88■■□□□ 1.89
CD9-202ENST00000382515 ARID4BQ4LE39 1312 aaPredicted RBP26.87■■□□□ 1.89
CD9-202ENST00000382515 SHANK2Q9UPX8 1470 aa26.86■■□□□ 1.89
CD9-202ENST00000382515 ARHGEF40Q8TER5 1519 aa26.85■■□□□ 1.89
CD9-202ENST00000382515 ATP7AQ04656 1500 aa26.85■■□□□ 1.89
CD9-202ENST00000382515 DHX29Q7Z478 1369 aaKnown RBP26.84■■□□□ 1.89
CD9-202ENST00000382515 ANKRD30AQ9BXX3 1397 aa26.82■■□□□ 1.88
CD9-202ENST00000382515 MAST1Q9Y2H9 1570 aa26.81■■□□□ 1.88
CD9-202ENST00000382515 KIDINS220Q9ULH0 1771 aa26.8■■□□□ 1.88
CD9-202ENST00000382515 REREQ9P2R6 1566 aa26.8■■□□□ 1.88
CD9-202ENST00000382515 INO80Q9ULG1 1556 aaPredicted RBP26.8■■□□□ 1.88
CD9-202ENST00000382515 A2MP01023 1474 aa26.79■■□□□ 1.88
CD9-202ENST00000382515 DNMT1P26358 1616 aaKnown RBP26.79■■□□□ 1.88
CD9-202ENST00000382515 CHIC2Q9UKJ5 165 aa26.78■■□□□ 1.88
CD9-202ENST00000382515 PPP6R1Q9UPN7 881 aa26.78■■□□□ 1.88
CD9-202ENST00000382515 DIP2CQ9Y2E4 1556 aa26.77■■□□□ 1.88
CD9-202ENST00000382515 AGLP35573 1532 aa26.76■■□□□ 1.87
CD9-202ENST00000382515 NCOA1Q15788 1441 aa26.76■■□□□ 1.87
CD9-202ENST00000382515 ROCK1Q13464 1354 aa26.76■■□□□ 1.87
CD9-202ENST00000382515 RRP7BPQ9NSQ0 103 aa26.76■■□□□ 1.87
CD9-202ENST00000382515 ITGAEP38570 1179 aa26.73■■□□□ 1.87
CD9-202ENST00000382515 KIF15Q9NS87 1388 aa26.72■■□□□ 1.87
CD9-202ENST00000382515 ADGRL2O95490 1459 aa26.72■■□□□ 1.87
CD9-202ENST00000382515 ABCA6Q8N139 1617 aa26.72■■□□□ 1.87
CD9-202ENST00000382515 PTPRKQ15262 1439 aa26.7■■□□□ 1.86
CD9-202ENST00000382515 KIF3BO15066 747 aa26.69■■□□□ 1.86
CD9-202ENST00000382515 KDM4FA0A1W2PPD8 638 aa26.68■■□□□ 1.86
CD9-202ENST00000382515 DUOX2Q9NRD8 1548 aa26.67■■□□□ 1.86
CD9-202ENST00000382515 PLXNC1O60486 1568 aa26.67■■□□□ 1.86
CD9-202ENST00000382515 MLECQ14165 292 aa26.66■■□□□ 1.86
CD9-202ENST00000382515 ESF1Q9H501 851 aaKnown RBP26.66■■□□□ 1.86
CD9-202ENST00000382515 ADGBQ8N7X0 1667 aa26.65■■□□□ 1.86
CD9-202ENST00000382515 GGT6Q6P531 493 aa26.64■■□□□ 1.86
CD9-202ENST00000382515 ERBINQ96RT1 1412 aa26.64■■□□□ 1.85
CD9-202ENST00000382515 CROCC2H7BZ55 1655 aa26.62■■□□□ 1.85
CD9-202ENST00000382515 ANKRD50Q9ULJ7 1429 aa26.59■■□□□ 1.85
CD9-202ENST00000382515 ACIN1Q9UKV3 1341 aaKnown RBP26.57■■□□□ 1.84
CD9-202ENST00000382515 CNTLNQ9NXG0 1405 aa26.56■■□□□ 1.84
CD9-202ENST00000382515 BCORL1Q5H9F3 1711 aa26.54■■□□□ 1.84
CD9-202ENST00000382515 WASHC2CQ9Y4E1 1318 aa26.54■■□□□ 1.84
CD9-202ENST00000382515 ADAMTSL3P82987 1691 aa26.5■■□□□ 1.83
CD9-202ENST00000382515 HFM1A2PYH4 1435 aa26.5■■□□□ 1.83
CD9-202ENST00000382515 EIF2AK4Q9P2K8 1649 aaKnown RBP26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms