RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 FANCAO15360 1455 aa25.46■■□□□ 1.67
SNRPB-201ENST00000381342 AKNAQ7Z591 1439 aa25.46■■□□□ 1.67
SNRPB-201ENST00000381342 PLCH2O75038 1416 aa25.45■■□□□ 1.66
SNRPB-201ENST00000381342 ARHGAP5Q13017 1502 aa25.43■■□□□ 1.66
SNRPB-201ENST00000381342 ADGRL1O94910 1474 aa25.42■■□□□ 1.66
SNRPB-201ENST00000381342 EFCAB2Q5VUJ9 269 aa25.42■■□□□ 1.66
SNRPB-201ENST00000381342 DENND4BO75064 1496 aaPredicted RBP25.41■■□□□ 1.66
SNRPB-201ENST00000381342 ITSN2Q9NZM3 1697 aa25.41■■□□□ 1.66
SNRPB-201ENST00000381342 NCOA2Q15596 1464 aa25.4■■□□□ 1.66
SNRPB-201ENST00000381342 APLP2Q06481 763 aa25.39■■□□□ 1.66
SNRPB-201ENST00000381342 KANK4Q5T7N3 995 aaPredicted RBP25.39■■□□□ 1.66
SNRPB-201ENST00000381342 GPATCH8Q9UKJ3 1502 aaKnown RBP25.37■■□□□ 1.65
SNRPB-201ENST00000381342 CCNB3Q8WWL7 1395 aa25.36■■□□□ 1.65
SNRPB-201ENST00000381342 FRMPD1Q5SYB0 1578 aa25.35■■□□□ 1.65
SNRPB-201ENST00000381342 RICTORQ6R327 1708 aa25.33■■□□□ 1.65
SNRPB-201ENST00000381342 ARID4BQ4LE39 1312 aaPredicted RBP25.32■■□□□ 1.64
SNRPB-201ENST00000381342 SAMD9LQ8IVG5 1584 aa25.31■■□□□ 1.64
SNRPB-201ENST00000381342 SCAPERQ9BY12 1400 aa25.31■■□□□ 1.64
SNRPB-201ENST00000381342 ABCC1P33527 1531 aa25.3■■□□□ 1.64
SNRPB-201ENST00000381342 MYT1LQ9UL68 1186 aa25.25■■□□□ 1.63
SNRPB-201ENST00000381342 SYCP2Q9BX26 1530 aa25.23■■□□□ 1.63
SNRPB-201ENST00000381342 POGZQ7Z3K3 1410 aa25.23■■□□□ 1.63
SNRPB-201ENST00000381342 MAGI2Q86UL8 1455 aa25.22■■□□□ 1.63
SNRPB-201ENST00000381342 CFDP1Q9UEE9 299 aaPredicted RBP25.22■■□□□ 1.63
SNRPB-201ENST00000381342 ARHGEF12Q9NZN5 1544 aa25.22■■□□□ 1.63
SNRPB-201ENST00000381342 ZNF777Q9ULD5 760 aaPredicted RBP25.21■■□□□ 1.63
SNRPB-201ENST00000381342 MYOM3Q5VTT5 1437 aa25.2■■□□□ 1.63
SNRPB-201ENST00000381342 ZMYM4Q5VZL5 1548 aa25.2■■□□□ 1.62
SNRPB-201ENST00000381342 ZFYVE16Q7Z3T8 1539 aa25.18■■□□□ 1.62
SNRPB-201ENST00000381342 ARHGEF40Q8TER5 1519 aa25.18■■□□□ 1.62
SNRPB-201ENST00000381342 CAMSAP2Q08AD1 1489 aa25.18■■□□□ 1.62
SNRPB-201ENST00000381342 KDM5CP41229 1560 aa25.17■■□□□ 1.62
SNRPB-201ENST00000381342 ZNF518AQ6AHZ1 1483 aa25.16■■□□□ 1.62
SNRPB-201ENST00000381342 PLEKHH2Q8IVE3 1493 aa25.16■■□□□ 1.62
SNRPB-201ENST00000381342 AFAP1Q8N556 730 aa25.15■■□□□ 1.62
SNRPB-201ENST00000381342 ZNF644Q9H582 1327 aaPredicted RBP25.14■■□□□ 1.62
SNRPB-201ENST00000381342 TRAPPC8Q9Y2L5 1435 aa25.14■■□□□ 1.62
SNRPB-201ENST00000381342 PPARGC1BQ86YN6 1023 aaKnown RBP25.13■■□□□ 1.61
SNRPB-201ENST00000381342 HECW2Q9P2P5 1572 aa25.13■■□□□ 1.61
SNRPB-201ENST00000381342 YEATS2Q9ULM3 1422 aa25.12■■□□□ 1.61
SNRPB-201ENST00000381342 PTPN23Q9H3S7 1636 aa25.12■■□□□ 1.61
SNRPB-201ENST00000381342 KIAA1107Q9UPP5 1409 aa25.12■■□□□ 1.61
SNRPB-201ENST00000381342 MIA2Q96PC5 1412 aa25.11■■□□□ 1.61
SNRPB-201ENST00000381342 ATP10AO60312 1499 aa25.09■■□□□ 1.61
SNRPB-201ENST00000381342 FGD6Q6ZV73 1430 aa25.09■■□□□ 1.61
SNRPB-201ENST00000381342 MLECQ14165 292 aa25.08■■□□□ 1.61
SNRPB-201ENST00000381342 BCORL1Q5H9F3 1711 aa25.07■■□□□ 1.6
SNRPB-201ENST00000381342 HNRNPMP52272 730 aaKnown RBP eCLIP25.07■■□□□ 1.6
SNRPB-201ENST00000381342 MBD5Q9P267 1494 aa25.07■■□□□ 1.6
SNRPB-201ENST00000381342 ADAMTSL3P82987 1691 aa25.06■■□□□ 1.6
SNRPB-201ENST00000381342 ARHGEF5Q12774 1597 aa25.05■■□□□ 1.6
SNRPB-201ENST00000381342 INO80Q9ULG1 1556 aaPredicted RBP25.05■■□□□ 1.6
SNRPB-201ENST00000381342 ABCA6Q8N139 1617 aa25.05■■□□□ 1.6
SNRPB-201ENST00000381342 C9orf84Q5VXU9 1444 aa25.05■■□□□ 1.6
SNRPB-201ENST00000381342 KIDINS220Q9ULH0 1771 aa25.05■■□□□ 1.6
SNRPB-201ENST00000381342 PTPRMP28827 1452 aa25.02■■□□□ 1.6
SNRPB-201ENST00000381342 TCOF1Q13428 1488 aaKnown RBP25.02■■□□□ 1.6
SNRPB-201ENST00000381342 CCDC141Q6ZP82 1450 aa25.02■■□□□ 1.6
SNRPB-201ENST00000381342 DIP2CQ9Y2E4 1556 aa25.02■■□□□ 1.6
SNRPB-201ENST00000381342 MLH3Q9UHC1 1453 aa25.02■■□□□ 1.6
SNRPB-201ENST00000381342 CROCC2H7BZ55 1655 aa25.01■■□□□ 1.59
SNRPB-201ENST00000381342 ATP7AQ04656 1500 aa25.01■■□□□ 1.59
SNRPB-201ENST00000381342 SIGLEC1Q9BZZ2 1709 aa25■■□□□ 1.59
SNRPB-201ENST00000381342 MADDQ8WXG6 1647 aa24.98■■□□□ 1.59
SNRPB-201ENST00000381342 SPAG9O60271 1321 aaKnown RBP24.97■■□□□ 1.59
SNRPB-201ENST00000381342 PLPPR3Q6T4P5 718 aa24.97■■□□□ 1.59
SNRPB-201ENST00000381342 DNMT1P26358 1616 aaKnown RBP24.97■■□□□ 1.59
SNRPB-201ENST00000381342 ESF1Q9H501 851 aaKnown RBP24.94■■□□□ 1.58
SNRPB-201ENST00000381342 RIMS1Q86UR5 1692 aaKnown RBP24.93■■□□□ 1.58
SNRPB-201ENST00000381342 ADGBQ8N7X0 1667 aa24.93■■□□□ 1.58
SNRPB-201ENST00000381342 MAST1Q9Y2H9 1570 aa24.93■■□□□ 1.58
SNRPB-201ENST00000381342 REREQ9P2R6 1566 aa24.91■■□□□ 1.58
SNRPB-201ENST00000381342 DAPK1P53355 1430 aa24.89■■□□□ 1.58
SNRPB-201ENST00000381342 FAM50AQ14320 339 aaKnown RBP24.88■■□□□ 1.57
SNRPB-201ENST00000381342 SHANK2Q9UPX8 1470 aa24.88■■□□□ 1.57
SNRPB-201ENST00000381342 RTEL1-TNFRSF6BF6WH68 1400 aa24.87■■□□□ 1.57
SNRPB-201ENST00000381342 ABCC5O15440 1437 aa24.87■■□□□ 1.57
SNRPB-201ENST00000381342 RSPH4AQ5TD94 716 aa24.86■■□□□ 1.57
SNRPB-201ENST00000381342 FER1L4A9Z1Z3 1794 aa24.85■■□□□ 1.57
SNRPB-201ENST00000381342 PLXNC1O60486 1568 aa24.85■■□□□ 1.57
SNRPB-201ENST00000381342 RRBP1Q9P2E9 1410 aaKnown RBP24.83■■□□□ 1.57
SNRPB-201ENST00000381342 AGLP35573 1532 aa24.81■■□□□ 1.56
SNRPB-201ENST00000381342 TSPY4P0CV99 314 aa24.81■■□□□ 1.56
SNRPB-201ENST00000381342 TSPY10P0CW01 314 aa24.81■■□□□ 1.56
SNRPB-201ENST00000381342 A2MP01023 1474 aa24.81■■□□□ 1.56
SNRPB-201ENST00000381342 CEBPAP49715 358 aaPredicted RBP24.76■■□□□ 1.55
SNRPB-201ENST00000381342 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.76■■□□□ 1.554e-8■■□□□ 13.5
SNRPB-201ENST00000381342 ADGRL2O95490 1459 aa24.73■■□□□ 1.55
SNRPB-201ENST00000381342 PTPRKQ15262 1439 aa24.73■■□□□ 1.55
SNRPB-201ENST00000381342 CNTLNQ9NXG0 1405 aa24.72■■□□□ 1.55
SNRPB-201ENST00000381342 CHIC2Q9UKJ5 165 aa24.72■■□□□ 1.55
SNRPB-201ENST00000381342 GGT6Q6P531 493 aa24.71■■□□□ 1.55
SNRPB-201ENST00000381342 DUOX2Q9NRD8 1548 aa24.71■■□□□ 1.55
SNRPB-201ENST00000381342 DHX29Q7Z478 1369 aaKnown RBP24.7■■□□□ 1.55
SNRPB-201ENST00000381342 KIF15Q9NS87 1388 aa24.7■■□□□ 1.55
SNRPB-201ENST00000381342 EIF2AK4Q9P2K8 1649 aaKnown RBP24.69■■□□□ 1.54
SNRPB-201ENST00000381342 LMTK3Q96Q04 1460 aa24.69■■□□□ 1.54
SNRPB-201ENST00000381342 ITGAEP38570 1179 aa24.68■■□□□ 1.54
SNRPB-201ENST00000381342 ANKRD30AQ9BXX3 1397 aa24.67■■□□□ 1.54
SNRPB-201ENST00000381342 PPP6R1Q9UPN7 881 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms