RNA–Protein interactions for RNA: ENST00000381337.6

THUMPD1-201, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 4,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-201ENST00000381337 TOP2AP11388 1531 aaKnown RBP14.73□□□□□ -0.05
THUMPD1-201ENST00000381337 KTN1Q86UP2 1357 aaKnown RBP14.73□□□□□ -0.05
THUMPD1-201ENST00000381337 GOLGA6L3A6NEY3 463 aa14.72□□□□□ -0.05
THUMPD1-201ENST00000381337 PRKCSHP14314 528 aaPredicted RBP14.71□□□□□ -0.05
THUMPD1-201ENST00000381337 RRP1P56182 461 aaKnown RBP14.71□□□□□ -0.05
THUMPD1-201ENST00000381337 MSNP26038 577 aaKnown RBP14.71□□□□□ -0.06
THUMPD1-201ENST00000381337 NLRP13Q86W25 1043 aa14.7□□□□□ -0.06
THUMPD1-201ENST00000381337 IL27Q8NEV9 243 aa14.7□□□□□ -0.06
THUMPD1-201ENST00000381337 CFAP53Q96M91 514 aa14.7□□□□□ -0.06
THUMPD1-201ENST00000381337 TMF1P82094 1093 aa14.7□□□□□ -0.06
THUMPD1-201ENST00000381337 PLEKHD1A6NEE1 506 aa14.69□□□□□ -0.06
THUMPD1-201ENST00000381337 PKD2Q13563 968 aa14.68□□□□□ -0.06
THUMPD1-201ENST00000381337 HSP90AA2PQ14568 343 aaPredicted RBP14.68□□□□□ -0.06
THUMPD1-201ENST00000381337 FAM161AQ3B820 660 aa14.67□□□□□ -0.06
THUMPD1-201ENST00000381337 VSIG10Q8N0Z9 540 aa14.66□□□□□ -0.06
THUMPD1-201ENST00000381337 PLIN1O60240 522 aa14.66□□□□□ -0.06
THUMPD1-201ENST00000381337 NFKBIBQ15653 356 aa14.64□□□□□ -0.07
THUMPD1-201ENST00000381337 CENPQQ7L2Z9 268 aaPredicted RBP14.64□□□□□ -0.07
THUMPD1-201ENST00000381337 GBP4Q96PP9 640 aa14.63□□□□□ -0.07
THUMPD1-201ENST00000381337 ROCK2O75116 1388 aaKnown RBP14.63□□□□□ -0.07
THUMPD1-201ENST00000381337 GOLGA2Q08379 1002 aa14.63□□□□□ -0.07
THUMPD1-201ENST00000381337 CRBNQ96SW2 442 aa14.62□□□□□ -0.07
THUMPD1-201ENST00000381337 MYBBP1AQ9BQG0 1328 aaKnown RBP14.61□□□□□ -0.07
THUMPD1-201ENST00000381337 WASHC2AQ641Q2 1341 aa14.61□□□□□ -0.07
THUMPD1-201ENST00000381337 BRPF3Q9ULD4 1205 aa14.61□□□□□ -0.07
THUMPD1-201ENST00000381337 KIF21BO75037 1637 aa14.6□□□□□ -0.07
THUMPD1-201ENST00000381337 KIF15Q9NS87 1388 aa14.59□□□□□ -0.07
THUMPD1-201ENST00000381337 RWDD1Q9H446 243 aaPredicted RBP14.59□□□□□ -0.07
THUMPD1-201ENST00000381337 CASC1Q6TDU7 716 aa14.59□□□□□ -0.07
THUMPD1-201ENST00000381337 PLCB2Q00722 1185 aa14.59□□□□□ -0.07
THUMPD1-201ENST00000381337 CCDC7Q96M83 1385 aa14.59□□□□□ -0.07
THUMPD1-201ENST00000381337 CCDC18Q5T9S5 1454 aa14.58□□□□□ -0.08
THUMPD1-201ENST00000381337 TPRNQ4KMQ1 711 aa14.58□□□□□ -0.08
THUMPD1-201ENST00000381337 MAPK8IP3Q9UPT6 1336 aa14.57□□□□□ -0.08
THUMPD1-201ENST00000381337 PMFBP1Q8TBY8 1022 aa14.57□□□□□ -0.08
THUMPD1-201ENST00000381337 CHMP7Q8WUX9 453 aaPredicted RBP14.57□□□□□ -0.08
THUMPD1-201ENST00000381337 FHOD3Q2V2M9 1422 aa14.57□□□□□ -0.08
THUMPD1-201ENST00000381337 PTMSP20962 102 aa14.56□□□□□ -0.08
THUMPD1-201ENST00000381337 CNTLNQ9NXG0 1405 aa14.56□□□□□ -0.08
THUMPD1-201ENST00000381337 CHMP4BQ9H444 224 aaKnown RBP14.56□□□□□ -0.08
THUMPD1-201ENST00000381337 ST20-MTHFSA0A0A6YYL1 179 aa14.56□□□□□ -0.08
THUMPD1-201ENST00000381337 RRBP1Q9P2E9 1410 aaKnown RBP14.56□□□□□ -0.08
THUMPD1-201ENST00000381337 MFAP1P55081 439 aaKnown RBP14.56□□□□□ -0.08
THUMPD1-201ENST00000381337 KIF7Q2M1P5 1343 aa14.55□□□□□ -0.08
THUMPD1-201ENST00000381337 ARID3AQ99856 593 aa14.54□□□□□ -0.08
THUMPD1-201ENST00000381337 PHLDB1Q86UU1 1377 aa14.54□□□□□ -0.08
THUMPD1-201ENST00000381337 U2SURPO15042 1029 aaKnown RBP14.51□□□□□ -0.09
THUMPD1-201ENST00000381337 NUP155O75694 1391 aa14.51□□□□□ -0.09
THUMPD1-201ENST00000381337 CCDC184Q52MB2 194 aa14.51□□□□□ -0.09
THUMPD1-201ENST00000381337 STAG3Q9UJ98 1225 aa14.51□□□□□ -0.09
THUMPD1-201ENST00000381337 BACH2Q9BYV9 841 aa14.51□□□□□ -0.09
THUMPD1-201ENST00000381337 USP47Q96K76 1375 aa14.51□□□□□ -0.09
THUMPD1-201ENST00000381337 UACAQ9BZF9 1416 aa14.5□□□□□ -0.09
THUMPD1-201ENST00000381337 CHAF1AQ13111 956 aaPredicted RBP14.5□□□□□ -0.09
THUMPD1-201ENST00000381337 CLUAP1Q96AJ1 413 aa14.5□□□□□ -0.09
THUMPD1-201ENST00000381337 CDK11BP21127 795 aaKnown RBP14.49□□□□□ -0.09
THUMPD1-201ENST00000381337 MORC1Q86VD1 984 aa14.49□□□□□ -0.09
THUMPD1-201ENST00000381337 CENPJQ9HC77 1338 aaPredicted RBP14.49□□□□□ -0.09
THUMPD1-201ENST00000381337 DDX11L8A8MPP1 907 aa14.49□□□□□ -0.09
THUMPD1-201ENST00000381337 AKNAQ7Z591 1439 aa14.49□□□□□ -0.09
THUMPD1-201ENST00000381337 CCDC146Q8IYE0 955 aa14.49□□□□□ -0.09
THUMPD1-201ENST00000381337 FRAT2O75474 233 aaPredicted RBP14.48□□□□□ -0.09
THUMPD1-201ENST00000381337 CALD1Q05682 793 aaKnown RBP14.47□□□□□ -0.09
THUMPD1-201ENST00000381337 WDR97A6NE52 1622 aa14.46□□□□□ -0.09
THUMPD1-201ENST00000381337 ZBTB7CA1YPR0 619 aa14.46□□□□□ -0.09
THUMPD1-201ENST00000381337 KIAA2012Q0VF49 1180 aa14.46□□□□□ -0.09
THUMPD1-201ENST00000381337 SMARCA2P51531 1590 aa14.46□□□□□ -0.1
THUMPD1-201ENST00000381337 CGNL1Q0VF96 1302 aa14.46□□□□□ -0.1
THUMPD1-201ENST00000381337 IPO8O15397 1037 aaKnown RBP14.45□□□□□ -0.1
THUMPD1-201ENST00000381337 PANK3Q9H999 370 aa14.45□□□□□ -0.1
THUMPD1-201ENST00000381337 ITPRIPQ8IWB1 547 aa14.45□□□□□ -0.1
THUMPD1-201ENST00000381337 FAM43AQ8N2R8 423 aa14.45□□□□□ -0.1
THUMPD1-201ENST00000381337 CFAP44Q96MT7 982 aa14.45□□□□□ -0.1
THUMPD1-201ENST00000381337 SENP3Q9H4L4 574 aaPredicted RBP14.44□□□□□ -0.1
THUMPD1-201ENST00000381337 FOXD4L1Q9NU39 408 aa14.44□□□□□ -0.1
THUMPD1-201ENST00000381337 ARAP1Q96P48 1450 aa14.44□□□□□ -0.1
THUMPD1-201ENST00000381337 ANKRD30AQ9BXX3 1397 aa14.43□□□□□ -0.1
THUMPD1-201ENST00000381337 CHMP5Q9NZZ3 219 aa14.43□□□□□ -0.1
THUMPD1-201ENST00000381337 COG6Q9Y2V7 657 aa14.43□□□□□ -0.1
THUMPD1-201ENST00000381337 EIF4G1Q04637 1599 aaKnown RBP14.43□□□□□ -0.1
THUMPD1-201ENST00000381337 LRRC9Q6ZRR7 1453 aa14.43□□□□□ -0.1
THUMPD1-201ENST00000381337 SMARCA4P51532 1647 aa14.42□□□□□ -0.1
THUMPD1-201ENST00000381337 FGD6Q6ZV73 1430 aa14.42□□□□□ -0.1
THUMPD1-201ENST00000381337 U2AF1L5P0DN76 240 aaPredicted RBP14.41□□□□□ -0.1
THUMPD1-201ENST00000381337 U2AF1Q01081 240 aaKnown RBP eCLIP14.41□□□□□ -0.1
THUMPD1-201ENST00000381337 CDCA7LQ96GN5 454 aa14.41□□□□□ -0.1
THUMPD1-201ENST00000381337 SMG6Q86US8 1419 aaKnown RBP14.41□□□□□ -0.1
THUMPD1-201ENST00000381337 SKOR2Q2VWA4 1001 aaPredicted RBP14.41□□□□□ -0.1
THUMPD1-201ENST00000381337 DDX49Q9Y6V7 483 aaKnown RBP14.41□□□□□ -0.1
THUMPD1-201ENST00000381337 SMC4Q9NTJ3 1288 aa14.4□□□□□ -0.1
THUMPD1-201ENST00000381337 E9PSI1 815 aa14.39□□□□□ -0.11
THUMPD1-201ENST00000381337 ZRSR1Q15695 479 aaKnown RBP14.39□□□□□ -0.11
THUMPD1-201ENST00000381337 PNISRQ8TF01 805 aaKnown RBP14.39□□□□□ -0.11
THUMPD1-201ENST00000381337 PKNOX2Q96KN3 472 aa14.39□□□□□ -0.11
THUMPD1-201ENST00000381337 APAF1O14727 1248 aa14.39□□□□□ -0.11
THUMPD1-201ENST00000381337 BRD4O60885 1362 aaPredicted RBP14.38□□□□□ -0.11
THUMPD1-201ENST00000381337 MRE11P49959 708 aa14.37□□□□□ -0.11
THUMPD1-201ENST00000381337 BCL2L13Q9BXK5 485 aa14.37□□□□□ -0.11
THUMPD1-201ENST00000381337 MCCP23508 829 aa14.37□□□□□ -0.11
THUMPD1-201ENST00000381337 SYAP1Q96A49 352 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms