RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 CDC42BPBQ9Y5S2 1711 aa39.65■■■■□ 3.94
TNFRSF4-201ENST00000379236 CEP162Q5TB80 1403 aa39.65■■■■□ 3.94
TNFRSF4-201ENST00000379236 ARID4BQ4LE39 1312 aaPredicted RBP39.65■■■■□ 3.94
TNFRSF4-201ENST00000379236 ZFYVE16Q7Z3T8 1539 aa39.64■■■■□ 3.94
TNFRSF4-201ENST00000379236 PREX2Q70Z35 1606 aa39.63■■■■□ 3.93
TNFRSF4-201ENST00000379236 POGZQ7Z3K3 1410 aa39.63■■■■□ 3.93
TNFRSF4-201ENST00000379236 BCORL1Q5H9F3 1711 aa39.59■■■■□ 3.93
TNFRSF4-201ENST00000379236 MAGI2Q86UL8 1455 aa39.58■■■■□ 3.93
TNFRSF4-201ENST00000379236 CDC42BPAQ5VT25 1732 aa39.57■■■■□ 3.92
TNFRSF4-201ENST00000379236 ADAMTSL3P82987 1691 aa39.56■■■■□ 3.92
TNFRSF4-201ENST00000379236 ZNF518AQ6AHZ1 1483 aa39.5■■■■□ 3.91
TNFRSF4-201ENST00000379236 YEATS2Q9ULM3 1422 aa39.49■■■■□ 3.91
TNFRSF4-201ENST00000379236 MADDQ8WXG6 1647 aa39.46■■■■□ 3.91
TNFRSF4-201ENST00000379236 MTUS2Q5JR59 1369 aa39.45■■■■□ 3.91
TNFRSF4-201ENST00000379236 ITSN2Q9NZM3 1697 aa39.44■■■■□ 3.9
TNFRSF4-201ENST00000379236 MYT1LQ9UL68 1186 aa39.43■■■■□ 3.9
TNFRSF4-201ENST00000379236 ABCC1P33527 1531 aa39.42■■■■□ 3.9
TNFRSF4-201ENST00000379236 KDM5CP41229 1560 aa39.41■■■■□ 3.9
TNFRSF4-201ENST00000379236 LOC105371045A0A1W2PR82 267 aa39.4■■■■□ 3.9
TNFRSF4-201ENST00000379236 HECW2Q9P2P5 1572 aa39.4■■■■□ 3.9
TNFRSF4-201ENST00000379236 RIMS1Q86UR5 1692 aaKnown RBP39.38■■■■□ 3.9
TNFRSF4-201ENST00000379236 PTPRMP28827 1452 aa39.38■■■■□ 3.9
TNFRSF4-201ENST00000379236 SIGLEC1Q9BZZ2 1709 aa39.38■■■■□ 3.89
TNFRSF4-201ENST00000379236 EHBP1L1Q8N3D4 1523 aa39.36■■■■□ 3.89
TNFRSF4-201ENST00000379236 ATP10AO60312 1499 aa39.36■■■■□ 3.89
TNFRSF4-201ENST00000379236 AFAP1Q8N556 730 aa39.35■■■■□ 3.89
TNFRSF4-201ENST00000379236 C9orf84Q5VXU9 1444 aa39.34■■■■□ 3.89
TNFRSF4-201ENST00000379236 ZNF777Q9ULD5 760 aaPredicted RBP39.33■■■■□ 3.89
TNFRSF4-201ENST00000379236 CCNB3Q8WWL7 1395 aa39.32■■■■□ 3.88
TNFRSF4-201ENST00000379236 GPATCH8Q9UKJ3 1502 aaKnown RBP39.31■■■■□ 3.88
TNFRSF4-201ENST00000379236 FER1L4A9Z1Z3 1794 aa39.3■■■■□ 3.88
TNFRSF4-201ENST00000379236 SAMD9LQ8IVG5 1584 aa39.29■■■■□ 3.88
TNFRSF4-201ENST00000379236 ARHGEF12Q9NZN5 1544 aa39.28■■■■□ 3.88
TNFRSF4-201ENST00000379236 TRAPPC8Q9Y2L5 1435 aa39.26■■■■□ 3.88
TNFRSF4-201ENST00000379236 MLECQ14165 292 aa39.26■■■■□ 3.88
TNFRSF4-201ENST00000379236 DIP2CQ9Y2E4 1556 aa39.25■■■■□ 3.87
TNFRSF4-201ENST00000379236 ABCA6Q8N139 1617 aa39.24■■■■□ 3.87
TNFRSF4-201ENST00000379236 SYCP2Q9BX26 1530 aa39.24■■■■□ 3.87
TNFRSF4-201ENST00000379236 MLH3Q9UHC1 1453 aa39.24■■■■□ 3.87
TNFRSF4-201ENST00000379236 CFDP1Q9UEE9 299 aaPredicted RBP39.23■■■■□ 3.87
TNFRSF4-201ENST00000379236 VPS8Q8N3P4 1428 aa39.21■■■■□ 3.87
TNFRSF4-201ENST00000379236 TIAM1Q13009 1591 aa39.21■■■■□ 3.87
TNFRSF4-201ENST00000379236 SUPT6HQ7KZ85 1726 aaKnown RBP39.2■■■■□ 3.87
TNFRSF4-201ENST00000379236 PLEKHH2Q8IVE3 1493 aa39.19■■■■□ 3.86
TNFRSF4-201ENST00000379236 KIDINS220Q9ULH0 1771 aa39.17■■■■□ 3.86
TNFRSF4-201ENST00000379236 REREQ9P2R6 1566 aa39.16■■■■□ 3.86
TNFRSF4-201ENST00000379236 PLPPR3Q6T4P5 718 aa39.13■■■■□ 3.85
TNFRSF4-201ENST00000379236 HNRNPMP52272 730 aaKnown RBP eCLIP39.11■■■■□ 3.85
TNFRSF4-201ENST00000379236 KIAA1107Q9UPP5 1409 aa39.1■■■■□ 3.85
TNFRSF4-201ENST00000379236 SPAG9O60271 1321 aaKnown RBP39.06■■■■□ 3.84
TNFRSF4-201ENST00000379236 NCOA2Q15596 1464 aa39.05■■■■□ 3.84
TNFRSF4-201ENST00000379236 ATP7AQ04656 1500 aa39.02■■■■□ 3.84
TNFRSF4-201ENST00000379236 AGLP35573 1532 aa39.01■■■■□ 3.84
TNFRSF4-201ENST00000379236 INO80Q9ULG1 1556 aaPredicted RBP38.99■■■■□ 3.83
TNFRSF4-201ENST00000379236 LRRC9Q6ZRR7 1453 aa38.97■■■■□ 3.83
TNFRSF4-201ENST00000379236 ESF1Q9H501 851 aaKnown RBP38.94■■■■□ 3.82
TNFRSF4-201ENST00000379236 MAP3K1Q13233 1512 aa38.94■■■■□ 3.82
TNFRSF4-201ENST00000379236 ZNF644Q9H582 1327 aaPredicted RBP38.93■■■■□ 3.82
TNFRSF4-201ENST00000379236 LMTK3Q96Q04 1460 aa38.92■■■■□ 3.82
TNFRSF4-201ENST00000379236 ADGBQ8N7X0 1667 aa38.9■■■■□ 3.82
TNFRSF4-201ENST00000379236 CAMSAP2Q08AD1 1489 aa38.89■■■■□ 3.82
TNFRSF4-201ENST00000379236 PREX1Q8TCU6 1659 aa38.86■■■■□ 3.81
TNFRSF4-201ENST00000379236 APLP2Q06481 763 aa38.85■■■■□ 3.81
TNFRSF4-201ENST00000379236 MBD5Q9P267 1494 aa38.85■■■■□ 3.81
TNFRSF4-201ENST00000379236 A2MP01023 1474 aa38.84■■■■□ 3.81
TNFRSF4-201ENST00000379236 C3P01024 1663 aa38.83■■■■□ 3.81
TNFRSF4-201ENST00000379236 CCDC141Q6ZP82 1450 aa38.81■■■■□ 3.8
TNFRSF4-201ENST00000379236 PLXNC1O60486 1568 aa38.81■■■■□ 3.8
TNFRSF4-201ENST00000379236 CEBPAP49715 358 aaPredicted RBP38.8■■■■□ 3.8
TNFRSF4-201ENST00000379236 KANK4Q5T7N3 995 aaPredicted RBP38.77■■■■□ 3.8
TNFRSF4-201ENST00000379236 CNTLNQ9NXG0 1405 aa38.77■■■■□ 3.8
TNFRSF4-201ENST00000379236 RTEL1-TNFRSF6BF6WH68 1400 aa38.76■■■■□ 3.8
TNFRSF4-201ENST00000379236 SETD1BQ9UPS6 1966 aaKnown RBP38.75■■■■□ 3.79
TNFRSF4-201ENST00000379236 RSPH4AQ5TD94 716 aa38.75■■■■□ 3.79
TNFRSF4-201ENST00000379236 MROH2AA6NES4 1674 aa38.74■■■■□ 3.79
TNFRSF4-201ENST00000379236 ARHGEF5Q12774 1597 aa38.73■■■■□ 3.79
TNFRSF4-201ENST00000379236 HSPA2P54652 639 aa38.71■■■■□ 3.79
TNFRSF4-201ENST00000379236 CLTCQ00610 1675 aaKnown RBP38.69■■■■□ 3.78
TNFRSF4-201ENST00000379236 MYOM3Q5VTT5 1437 aa38.67■■■■□ 3.78
TNFRSF4-201ENST00000379236 UHRF1BP1Q6BDS2 1440 aa38.66■■■■□ 3.78
TNFRSF4-201ENST00000379236 TSPY4P0CV99 314 aa38.65■■■■□ 3.78
TNFRSF4-201ENST00000379236 TSPY10P0CW01 314 aa38.65■■■■□ 3.78
TNFRSF4-201ENST00000379236 GGT6Q6P531 493 aa38.64■■■■□ 3.78
TNFRSF4-201ENST00000379236 MIA2Q96PC5 1412 aa38.63■■■■□ 3.78
TNFRSF4-201ENST00000379236 DHX29Q7Z478 1369 aaKnown RBP38.59■■■■□ 3.77
TNFRSF4-201ENST00000379236 ZMYM3Q14202 1370 aa38.54■■■■□ 3.76
TNFRSF4-201ENST00000379236 MAST1Q9Y2H9 1570 aa38.53■■■■□ 3.76
TNFRSF4-201ENST00000379236 PPP6R1Q9UPN7 881 aa38.51■■■■□ 3.76
TNFRSF4-201ENST00000379236 PTPN23Q9H3S7 1636 aa38.5■■■■□ 3.75
TNFRSF4-201ENST00000379236 NPATQ14207 1427 aa38.48■■■■□ 3.75
TNFRSF4-201ENST00000379236 KIF3BO15066 747 aa38.48■■■■□ 3.75
TNFRSF4-201ENST00000379236 CROCC2H7BZ55 1655 aa38.44■■■■□ 3.74
TNFRSF4-201ENST00000379236 ILDR1Q86SU0 546 aaPredicted RBP38.41■■■■□ 3.74
TNFRSF4-201ENST00000379236 STRCQ7RTU9 1775 aa38.4■■■■□ 3.74
TNFRSF4-201ENST00000379236 FAM135AQ9P2D6 1515 aa38.4■■■■□ 3.74
TNFRSF4-201ENST00000379236 KDM5DQ9BY66 1539 aa38.39■■■■□ 3.74
TNFRSF4-201ENST00000379236 MYO3AQ8NEV4 1616 aa38.38■■■■□ 3.74
TNFRSF4-201ENST00000379236 FGD6Q6ZV73 1430 aa38.38■■■■□ 3.73
TNFRSF4-201ENST00000379236 EIF2AK4Q9P2K8 1649 aaKnown RBP38.37■■■■□ 3.73
TNFRSF4-201ENST00000379236 PTPRKQ15262 1439 aa38.34■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms