RNA–Protein interactions for RNA: ENST00000379162.8

PDK3-201, Transcript of pyruvate dehydrogenase kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDK3, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK3-201ENST00000379162 PREX2Q70Z35 1606 aa32.2■■■□□ 2.75
PDK3-201ENST00000379162 DNMT1P26358 1616 aaKnown RBP32.19■■■□□ 2.74
PDK3-201ENST00000379162 WDR7Q9Y4E6 1490 aa32.18■■■□□ 2.74
PDK3-201ENST00000379162 ABCC5O15440 1437 aa32.17■■■□□ 2.74
PDK3-201ENST00000379162 DAPK1P53355 1430 aa32.17■■■□□ 2.74
PDK3-201ENST00000379162 CHIC2Q9UKJ5 165 aa32.17■■■□□ 2.74
PDK3-201ENST00000379162 ASXL2Q76L83 1435 aa32.14■■■□□ 2.74
PDK3-201ENST00000379162 HFM1A2PYH4 1435 aa32.12■■■□□ 2.73
PDK3-201ENST00000379162 DHX57Q6P158 1386 aaKnown RBP32.12■■■□□ 2.73
PDK3-201ENST00000379162 MYO5CQ9NQX4 1742 aa32.12■■■□□ 2.73
PDK3-201ENST00000379162 SAMD9LQ8IVG5 1584 aa32.11■■■□□ 2.73
PDK3-201ENST00000379162 NAIPQ13075 1403 aa32.1■■■□□ 2.73
PDK3-201ENST00000379162 CYB5RLQ6IPT4 315 aa32.1■■■□□ 2.73
PDK3-201ENST00000379162 ZEB1P37275 1124 aaPredicted RBP32.1■■■□□ 2.73
PDK3-201ENST00000379162 RRP7BPQ9NSQ0 103 aa32.08■■■□□ 2.73
PDK3-201ENST00000379162 ARHGAP5Q13017 1502 aa32.07■■■□□ 2.72
PDK3-201ENST00000379162 NPM1P06748 294 aaKnown RBP eCLIP32.05■■■□□ 2.72
PDK3-201ENST00000379162 CROCC2H7BZ55 1655 aa32.05■■■□□ 2.72
PDK3-201ENST00000379162 GCC2Q8IWJ2 1684 aa32.02■■■□□ 2.72
PDK3-201ENST00000379162 PLCH2O75038 1416 aa32.02■■■□□ 2.72
PDK3-201ENST00000379162 AKNAQ7Z591 1439 aa32.01■■■□□ 2.71
PDK3-201ENST00000379162 HNRNPMP52272 730 aaKnown RBP eCLIP32■■■□□ 2.71
PDK3-201ENST00000379162 KDM6BO15054 1643 aa32■■■□□ 2.71
PDK3-201ENST00000379162 MBD5Q9P267 1494 aa31.99■■■□□ 2.71
PDK3-201ENST00000379162 ABCA9Q8IUA7 1624 aa31.98■■■□□ 2.71
PDK3-201ENST00000379162 SYCP2Q9BX26 1530 aa31.96■■■□□ 2.71
PDK3-201ENST00000379162 ROCK1Q13464 1354 aa31.96■■■□□ 2.71
PDK3-201ENST00000379162 ARHGEF5Q12774 1597 aa31.95■■■□□ 2.7
PDK3-201ENST00000379162 ADGBQ8N7X0 1667 aa31.93■■■□□ 2.7
PDK3-201ENST00000379162 ARHGEF12Q9NZN5 1544 aa31.91■■■□□ 2.7
PDK3-201ENST00000379162 ADGRL2O95490 1459 aa31.89■■■□□ 2.7
PDK3-201ENST00000379162 SHANK2Q9UPX8 1470 aa31.89■■■□□ 2.69
PDK3-201ENST00000379162 MAPKBP1O60336 1514 aa31.88■■■□□ 2.69
PDK3-201ENST00000379162 NCOA1Q15788 1441 aa31.88■■■□□ 2.69
PDK3-201ENST00000379162 C9orf84Q5VXU9 1444 aa31.88■■■□□ 2.69
PDK3-201ENST00000379162 ARAP3Q8WWN8 1544 aa31.87■■■□□ 2.69
PDK3-201ENST00000379162 CCDC141Q6ZP82 1450 aa31.87■■■□□ 2.69
PDK3-201ENST00000379162 EFCAB2Q5VUJ9 269 aa31.87■■■□□ 2.69
PDK3-201ENST00000379162 ABCC1P33527 1531 aa31.85■■■□□ 2.69
PDK3-201ENST00000379162 KIAA1107Q9UPP5 1409 aa31.84■■■□□ 2.69
PDK3-201ENST00000379162 PLEKHH2Q8IVE3 1493 aa31.83■■■□□ 2.69
PDK3-201ENST00000379162 FANCAO15360 1455 aa31.8■■■□□ 2.68
PDK3-201ENST00000379162 ANKRD30AQ9BXX3 1397 aa31.8■■■□□ 2.68
PDK3-201ENST00000379162 CLSPNQ9HAW4 1339 aa31.78■■■□□ 2.68
PDK3-201ENST00000379162 TSPY4P0CV99 314 aa31.78■■■□□ 2.68
PDK3-201ENST00000379162 TSPY10P0CW01 314 aa31.78■■■□□ 2.68
PDK3-201ENST00000379162 TRAPPC8Q9Y2L5 1435 aa31.76■■■□□ 2.67
PDK3-201ENST00000379162 RSPH4AQ5TD94 716 aa31.74■■■□□ 2.67
PDK3-201ENST00000379162 CD109Q6YHK3 1445 aa31.74■■■□□ 2.67
PDK3-201ENST00000379162 MAST1Q9Y2H9 1570 aa31.73■■■□□ 2.67
PDK3-201ENST00000379162 KIF15Q9NS87 1388 aa31.69■■■□□ 2.66
PDK3-201ENST00000379162 TRIM52Q96A61 297 aa31.69■■■□□ 2.66
PDK3-201ENST00000379162 DENND4BO75064 1496 aaPredicted RBP31.68■■■□□ 2.66
PDK3-201ENST00000379162 ANKRD50Q9ULJ7 1429 aa31.67■■■□□ 2.66
PDK3-201ENST00000379162 ADGRL1O94910 1474 aa31.66■■■□□ 2.66
PDK3-201ENST00000379162 AFAP1Q8N556 730 aa31.65■■■□□ 2.66
PDK3-201ENST00000379162 SCAPERQ9BY12 1400 aa31.63■■■□□ 2.65
PDK3-201ENST00000379162 MAP3K4Q9Y6R4 1608 aa31.62■■■□□ 2.65
PDK3-201ENST00000379162 PLXNC1O60486 1568 aa31.61■■■□□ 2.65
PDK3-201ENST00000379162 DIP2BQ9P265 1576 aa31.61■■■□□ 2.65
PDK3-201ENST00000379162 SIN3AQ96ST3 1273 aa31.6■■■□□ 2.65
PDK3-201ENST00000379162 GLI2P10070 1586 aa31.6■■■□□ 2.65
PDK3-201ENST00000379162 ZFYVE16Q7Z3T8 1539 aa31.56■■■□□ 2.64
PDK3-201ENST00000379162 MPHOSPH9Q99550 1183 aa31.56■■■□□ 2.64
PDK3-201ENST00000379162 CFAP74Q9C0B2 1584 aa31.56■■■□□ 2.64
PDK3-201ENST00000379162 PZPP20742 1482 aa31.55■■■□□ 2.64
PDK3-201ENST00000379162 SPAG9O60271 1321 aaKnown RBP31.54■■■□□ 2.64
PDK3-201ENST00000379162 FAM69CQ0P6D2 419 aa31.53■■■□□ 2.64
PDK3-201ENST00000379162 INO80Q9ULG1 1556 aaPredicted RBP31.51■■■□□ 2.64
PDK3-201ENST00000379162 NEUROD1Q13562 356 aa31.5■■■□□ 2.63
PDK3-201ENST00000379162 FOXD1Q16676 465 aa31.5■■■□□ 2.63
PDK3-201ENST00000379162 RTEL1-TNFRSF6BF6WH68 1400 aa31.49■■■□□ 2.63
PDK3-201ENST00000379162 ATP7AQ04656 1500 aa31.48■■■□□ 2.63
PDK3-201ENST00000379162 NEO1Q92859 1461 aa31.48■■■□□ 2.63
PDK3-201ENST00000379162 DUOX2Q9NRD8 1548 aa31.47■■■□□ 2.63
PDK3-201ENST00000379162 POGZQ7Z3K3 1410 aa31.45■■■□□ 2.62
PDK3-201ENST00000379162 SLC4A1APQ9BWU0 796 aaKnown RBP31.45■■■□□ 2.62
PDK3-201ENST00000379162 ACIN1Q9UKV3 1341 aaKnown RBP31.44■■■□□ 2.62
PDK3-201ENST00000379162 ZNF518AQ6AHZ1 1483 aa31.43■■■□□ 2.62
PDK3-201ENST00000379162 PPRC1Q5VV67 1664 aaKnown RBP31.42■■■□□ 2.62
PDK3-201ENST00000379162 NUP155O75694 1391 aa31.42■■■□□ 2.62
PDK3-201ENST00000379162 TSPOAP1O95153 1857 aa31.42■■■□□ 2.62
PDK3-201ENST00000379162 KDM5DQ9BY66 1539 aa31.41■■■□□ 2.62
PDK3-201ENST00000379162 KIDINS220Q9ULH0 1771 aa31.41■■■□□ 2.62
PDK3-201ENST00000379162 KIF13AQ9H1H9 1805 aa31.4■■■□□ 2.62
PDK3-201ENST00000379162 KDM5CP41229 1560 aa31.4■■■□□ 2.62
PDK3-201ENST00000379162 ERBINQ96RT1 1412 aa31.39■■■□□ 2.62
PDK3-201ENST00000379162 UNC13BO14795 1591 aa31.39■■■□□ 2.62
PDK3-201ENST00000379162 RAPGEF3O95398 923 aa31.35■■■□□ 2.61
PDK3-201ENST00000379162 MYT1LQ9UL68 1186 aa31.35■■■□□ 2.61
PDK3-201ENST00000379162 ANKRD30BQ9BXX2 1392 aa31.34■■■□□ 2.61
PDK3-201ENST00000379162 FAM135AQ9P2D6 1515 aa31.31■■■□□ 2.6
PDK3-201ENST00000379162 RICTORQ6R327 1708 aa31.31■■■□□ 2.6
PDK3-201ENST00000379162 PKD2Q13563 968 aa31.31■■■□□ 2.6
PDK3-201ENST00000379162 HECW2Q9P2P5 1572 aa31.3■■■□□ 2.6
PDK3-201ENST00000379162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.3■■■□□ 2.6
PDK3-201ENST00000379162 MAGI2Q86UL8 1455 aa31.29■■■□□ 2.6
PDK3-201ENST00000379162 MLH3Q9UHC1 1453 aa31.29■■■□□ 2.6
PDK3-201ENST00000379162 FRMPD1Q5SYB0 1578 aa31.28■■■□□ 2.6
PDK3-201ENST00000379162 IQGAP3Q86VI3 1631 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms