RNA–Protein interactions for RNA: ENST00000378538.7

SPI1-202, Transcript of Spi-1 proto-oncogene, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPI1, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPI1-202ENST00000378538 ZFYVE16Q7Z3T8 1539 aa35■■■■□ 3.19
SPI1-202ENST00000378538 TROQ12816 1431 aaPredicted RBP34.99■■■■□ 3.19
SPI1-202ENST00000378538 SIGLEC1Q9BZZ2 1709 aa34.98■■■■□ 3.19
SPI1-202ENST00000378538 MYO5CQ9NQX4 1742 aa34.98■■■■□ 3.19
SPI1-202ENST00000378538 MAGI2Q86UL8 1455 aa34.98■■■■□ 3.19
SPI1-202ENST00000378538 POGZQ7Z3K3 1410 aa34.98■■■■□ 3.19
SPI1-202ENST00000378538 RIMS1Q86UR5 1692 aaKnown RBP34.93■■■■□ 3.18
SPI1-202ENST00000378538 CLIP1P30622 1438 aa34.9■■■■□ 3.18
SPI1-202ENST00000378538 CASKIN1Q8WXD9 1431 aa34.88■■■■□ 3.17
SPI1-202ENST00000378538 MLECQ14165 292 aa34.86■■■■□ 3.17
SPI1-202ENST00000378538 PCF11O94913 1555 aaKnown RBP34.85■■■■□ 3.17
SPI1-202ENST00000378538 ARHGAP5Q13017 1502 aa34.85■■■■□ 3.17
SPI1-202ENST00000378538 ATP10AO60312 1499 aa34.83■■■■□ 3.17
SPI1-202ENST00000378538 AFAP1Q8N556 730 aa34.83■■■■□ 3.17
SPI1-202ENST00000378538 PLPPR3Q6T4P5 718 aa34.81■■■■□ 3.16
SPI1-202ENST00000378538 LMTK3Q96Q04 1460 aa34.81■■■■□ 3.16
SPI1-202ENST00000378538 CDC42BPBQ9Y5S2 1711 aa34.81■■■■□ 3.16
SPI1-202ENST00000378538 CCDC18Q5T9S5 1454 aa34.8■■■■□ 3.16
SPI1-202ENST00000378538 ZNF518AQ6AHZ1 1483 aa34.78■■■■□ 3.16
SPI1-202ENST00000378538 C9orf84Q5VXU9 1444 aa34.77■■■■□ 3.16
SPI1-202ENST00000378538 KDM5CP41229 1560 aa34.74■■■■□ 3.15
SPI1-202ENST00000378538 FER1L4A9Z1Z3 1794 aa34.72■■■■□ 3.15
SPI1-202ENST00000378538 FYCO1Q9BQS8 1478 aa34.7■■■■□ 3.15
SPI1-202ENST00000378538 PREX2Q70Z35 1606 aa34.69■■■■□ 3.14
SPI1-202ENST00000378538 ARHGEF12Q9NZN5 1544 aa34.69■■■■□ 3.14
SPI1-202ENST00000378538 HSPA2P54652 639 aa34.68■■■■□ 3.14
SPI1-202ENST00000378538 MYT1LQ9UL68 1186 aa34.68■■■■□ 3.14
SPI1-202ENST00000378538 TRAPPC8Q9Y2L5 1435 aa34.66■■■■□ 3.14
SPI1-202ENST00000378538 CDC42BPAQ5VT25 1732 aa34.63■■■■□ 3.13
SPI1-202ENST00000378538 ABCC1P33527 1531 aa34.63■■■■□ 3.13
SPI1-202ENST00000378538 MLH3Q9UHC1 1453 aa34.63■■■■□ 3.13
SPI1-202ENST00000378538 DIP2CQ9Y2E4 1556 aa34.62■■■■□ 3.13
SPI1-202ENST00000378538 CEBPAP49715 358 aaPredicted RBP34.6■■■■□ 3.13
SPI1-202ENST00000378538 ITSN2Q9NZM3 1697 aa34.58■■■■□ 3.13
SPI1-202ENST00000378538 ABCA6Q8N139 1617 aa34.57■■■■□ 3.13
SPI1-202ENST00000378538 ZNF777Q9ULD5 760 aaPredicted RBP34.55■■■■□ 3.12
SPI1-202ENST00000378538 REREQ9P2R6 1566 aa34.54■■■■□ 3.12
SPI1-202ENST00000378538 FBXO41Q8TF61 875 aa34.53■■■■□ 3.12
SPI1-202ENST00000378538 GPATCH8Q9UKJ3 1502 aaKnown RBP34.52■■■■□ 3.12
SPI1-202ENST00000378538 KIDINS220Q9ULH0 1771 aa34.5■■■■□ 3.11
SPI1-202ENST00000378538 SAMD9LQ8IVG5 1584 aa34.48■■■■□ 3.11
SPI1-202ENST00000378538 HNRNPMP52272 730 aaKnown RBP eCLIP34.47■■■■□ 3.11
SPI1-202ENST00000378538 AGLP35573 1532 aa34.46■■■■□ 3.11
SPI1-202ENST00000378538 PREX1Q8TCU6 1659 aa34.43■■■■□ 3.1
SPI1-202ENST00000378538 SYCP2Q9BX26 1530 aa34.42■■■■□ 3.1
SPI1-202ENST00000378538 CFDP1Q9UEE9 299 aaPredicted RBP34.41■■■■□ 3.1
SPI1-202ENST00000378538 MTUS2Q5JR59 1369 aa34.4■■■■□ 3.1
SPI1-202ENST00000378538 SETD1BQ9UPS6 1966 aaKnown RBP34.39■■■■□ 3.1
SPI1-202ENST00000378538 CCNB3Q8WWL7 1395 aa34.39■■■■□ 3.1
SPI1-202ENST00000378538 SPAG9O60271 1321 aaKnown RBP34.37■■■■□ 3.09
SPI1-202ENST00000378538 C3P01024 1663 aa34.35■■■■□ 3.09
SPI1-202ENST00000378538 KIAA1107Q9UPP5 1409 aa34.35■■■■□ 3.09
SPI1-202ENST00000378538 ESF1Q9H501 851 aaKnown RBP34.34■■■■□ 3.09
SPI1-202ENST00000378538 CEP162Q5TB80 1403 aa34.33■■■■□ 3.09
SPI1-202ENST00000378538 UHRF1BP1Q6BDS2 1440 aa34.3■■■■□ 3.08
SPI1-202ENST00000378538 PLEKHH2Q8IVE3 1493 aa34.3■■■■□ 3.08
SPI1-202ENST00000378538 ZNF644Q9H582 1327 aaPredicted RBP34.28■■■■□ 3.08
SPI1-202ENST00000378538 STRCQ7RTU9 1775 aa34.26■■■■□ 3.08
SPI1-202ENST00000378538 ATP7AQ04656 1500 aa34.26■■■■□ 3.08
SPI1-202ENST00000378538 TIAM1Q13009 1591 aa34.25■■■■□ 3.07
SPI1-202ENST00000378538 SUPT6HQ7KZ85 1726 aaKnown RBP34.24■■■■□ 3.07
SPI1-202ENST00000378538 CNTLNQ9NXG0 1405 aa34.24■■■■□ 3.07
SPI1-202ENST00000378538 CERKQ8TCT0 537 aa34.23■■■■□ 3.07
SPI1-202ENST00000378538 EHBP1L1Q8N3D4 1523 aa34.23■■■■□ 3.07
SPI1-202ENST00000378538 INO80Q9ULG1 1556 aaPredicted RBP34.23■■■■□ 3.07
SPI1-202ENST00000378538 A2MP01023 1474 aa34.19■■■■□ 3.06
SPI1-202ENST00000378538 DMRT2Q9Y5R5 561 aa34.18■■■■□ 3.06
SPI1-202ENST00000378538 MBD5Q9P267 1494 aa34.18■■■■□ 3.06
SPI1-202ENST00000378538 PLXNC1O60486 1568 aa34.17■■■■□ 3.06
SPI1-202ENST00000378538 ZMYM3Q14202 1370 aa34.17■■■■□ 3.06
SPI1-202ENST00000378538 LOC105371045A0A1W2PR82 267 aa34.14■■■■□ 3.06
SPI1-202ENST00000378538 MROH2AA6NES4 1674 aa34.14■■■■□ 3.06
SPI1-202ENST00000378538 GGT6Q6P531 493 aa34.12■■■■□ 3.05
SPI1-202ENST00000378538 NPATQ14207 1427 aa34.09■■■■□ 3.05
SPI1-202ENST00000378538 NCOA2Q15596 1464 aa34.08■■■■□ 3.05
SPI1-202ENST00000378538 CLTCQ00610 1675 aaKnown RBP34.08■■■■□ 3.05
SPI1-202ENST00000378538 ADGBQ8N7X0 1667 aa34.07■■■■□ 3.04
SPI1-202ENST00000378538 RTEL1-TNFRSF6BF6WH68 1400 aa34.06■■■■□ 3.04
SPI1-202ENST00000378538 PTPRTO14522 1441 aa34.04■■■■□ 3.04
SPI1-202ENST00000378538 PPP6R1Q9UPN7 881 aa34■■■■□ 3.03
SPI1-202ENST00000378538 DHX29Q7Z478 1369 aaKnown RBP34■■■■□ 3.03
SPI1-202ENST00000378538 NCOA1Q15788 1441 aa34■■■■□ 3.03
SPI1-202ENST00000378538 CAMSAP2Q08AD1 1489 aa33.98■■■■□ 3.03
SPI1-202ENST00000378538 PTPRKQ15262 1439 aa33.98■■■■□ 3.03
SPI1-202ENST00000378538 CCDC141Q6ZP82 1450 aa33.96■■■■□ 3.03
SPI1-202ENST00000378538 VPS8Q8N3P4 1428 aa33.96■■■■□ 3.03
SPI1-202ENST00000378538 CAMSAP1Q5T5Y3 1602 aa33.95■■■■□ 3.03
SPI1-202ENST00000378538 RSPH4AQ5TD94 716 aa33.95■■■■□ 3.02
SPI1-202ENST00000378538 LRRC9Q6ZRR7 1453 aa33.92■■■■□ 3.02
SPI1-202ENST00000378538 KIF3BO15066 747 aa33.9■■■■□ 3.02
SPI1-202ENST00000378538 NCKAP5LQ9HCH0 1330 aa33.9■■■■□ 3.02
SPI1-202ENST00000378538 MYO3AQ8NEV4 1616 aa33.89■■■■□ 3.02
SPI1-202ENST00000378538 KANK4Q5T7N3 995 aaPredicted RBP33.88■■■■□ 3.01
SPI1-202ENST00000378538 LTBP4Q8N2S1 1624 aa33.86■■■■□ 3.01
SPI1-202ENST00000378538 ZNF142P52746 1687 aaPredicted RBP33.86■■■■□ 3.01
SPI1-202ENST00000378538 ARHGEF5Q12774 1597 aa33.85■■■■□ 3.01
SPI1-202ENST00000378538 CEP170BQ9Y4F5 1589 aaPredicted RBP33.83■■■■□ 3.01
SPI1-202ENST00000378538 TSPY4P0CV99 314 aa33.83■■■■□ 3.01
SPI1-202ENST00000378538 TSPY10P0CW01 314 aa33.83■■■■□ 3.01
SPI1-202ENST00000378538 FBXO31Q5XUX0 539 aaPredicted RBP33.8■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms