RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 CFDP1Q9UEE9 299 aaPredicted RBP27.51■■□□□ 1.99
PCDHA4-201ENST00000378125 ABCC5O15440 1437 aa27.51■■□□□ 1.99
PCDHA4-201ENST00000378125 KIF14Q15058 1648 aa27.49■■□□□ 1.99
PCDHA4-201ENST00000378125 DENND4BO75064 1496 aaPredicted RBP27.48■■□□□ 1.99
PCDHA4-201ENST00000378125 MPHOSPH9Q99550 1183 aa27.47■■□□□ 1.99
PCDHA4-201ENST00000378125 AKNAQ7Z591 1439 aa27.47■■□□□ 1.99
PCDHA4-201ENST00000378125 DNMT1P26358 1616 aaKnown RBP27.45■■□□□ 1.99
PCDHA4-201ENST00000378125 PLEKHD1A6NEE1 506 aa27.42■■□□□ 1.98
PCDHA4-201ENST00000378125 GPATCH8Q9UKJ3 1502 aaKnown RBP27.42■■□□□ 1.98
PCDHA4-201ENST00000378125 CAMSAP2Q08AD1 1489 aa27.42■■□□□ 1.98
PCDHA4-201ENST00000378125 ABCA8O94911 1581 aa27.4■■□□□ 1.98
PCDHA4-201ENST00000378125 ATP10BO94823 1461 aa27.39■■□□□ 1.98
PCDHA4-201ENST00000378125 ROCK1Q13464 1354 aa27.39■■□□□ 1.97
PCDHA4-201ENST00000378125 KCNH8Q96L42 1107 aa27.39■■□□□ 1.97
PCDHA4-201ENST00000378125 CHD1O14646 1710 aa27.36■■□□□ 1.97
PCDHA4-201ENST00000378125 ITSN2Q9NZM3 1697 aa27.35■■□□□ 1.97
PCDHA4-201ENST00000378125 PTPRGP23470 1445 aa27.34■■□□□ 1.97
PCDHA4-201ENST00000378125 ADCY10Q96PN6 1610 aa27.34■■□□□ 1.97
PCDHA4-201ENST00000378125 KDM5BQ9UGL1 1544 aa27.34■■□□□ 1.97
PCDHA4-201ENST00000378125 SLC4A1APQ9BWU0 796 aaKnown RBP27.32■■□□□ 1.96
PCDHA4-201ENST00000378125 NCOA1Q15788 1441 aa27.26■■□□□ 1.95
PCDHA4-201ENST00000378125 L3MBTL2Q969R5 705 aa27.26■■□□□ 1.95
PCDHA4-201ENST00000378125 CDC42BPAQ5VT25 1732 aa27.25■■□□□ 1.95
PCDHA4-201ENST00000378125 ABCC10Q5T3U5 1492 aa27.24■■□□□ 1.95
PCDHA4-201ENST00000378125 ANKRD30BQ9BXX2 1392 aa27.21■■□□□ 1.95
PCDHA4-201ENST00000378125 HNRNPMP52272 730 aaKnown RBP eCLIP27.19■■□□□ 1.94
PCDHA4-201ENST00000378125 ADGBQ8N7X0 1667 aa27.19■■□□□ 1.94
PCDHA4-201ENST00000378125 ERCC6L2Q5T890 1561 aa27.18■■□□□ 1.94
PCDHA4-201ENST00000378125 CROCC2H7BZ55 1655 aa27.18■■□□□ 1.94
PCDHA4-201ENST00000378125 ANKRD30AQ9BXX3 1397 aa27.17■■□□□ 1.94
PCDHA4-201ENST00000378125 HSPA5P11021 654 aaKnown RBP27.17■■□□□ 1.94
PCDHA4-201ENST00000378125 PZPP20742 1482 aa27.15■■□□□ 1.94
PCDHA4-201ENST00000378125 ADGRL2O95490 1459 aa27.13■■□□□ 1.93
PCDHA4-201ENST00000378125 RPRD2Q5VT52 1461 aaKnown RBP27.12■■□□□ 1.93
PCDHA4-201ENST00000378125 ANP32CO43423 234 aa27.12■■□□□ 1.93
PCDHA4-201ENST00000378125 TSPY4P0CV99 314 aa27.12■■□□□ 1.93
PCDHA4-201ENST00000378125 TSPY10P0CW01 314 aa27.12■■□□□ 1.93
PCDHA4-201ENST00000378125 C9orf84Q5VXU9 1444 aa27.11■■□□□ 1.93
PCDHA4-201ENST00000378125 ANKRD50Q9ULJ7 1429 aa27.11■■□□□ 1.93
PCDHA4-201ENST00000378125 NBPF8Q3BBV2 869 aa27.1■■□□□ 1.93
PCDHA4-201ENST00000378125 PKD2Q13563 968 aa27.1■■□□□ 1.93
PCDHA4-201ENST00000378125 SHROOM2Q13796 1616 aa27.09■■□□□ 1.93
PCDHA4-201ENST00000378125 EIF4G2P78344 907 aaKnown RBP eCLIP27.07■■□□□ 1.92
PCDHA4-201ENST00000378125 TEX14Q8IWB6 1497 aa27.04■■□□□ 1.92
PCDHA4-201ENST00000378125 WASHC2AQ641Q2 1341 aa27.03■■□□□ 1.92
PCDHA4-201ENST00000378125 NUP155O75694 1391 aa27.03■■□□□ 1.92
PCDHA4-201ENST00000378125 CDC42BPBQ9Y5S2 1711 aa27.02■■□□□ 1.92
PCDHA4-201ENST00000378125 KIAA1107Q9UPP5 1409 aa27.01■■□□□ 1.91
PCDHA4-201ENST00000378125 SAMD9LQ8IVG5 1584 aa27■■□□□ 1.91
PCDHA4-201ENST00000378125 ZNF326Q5BKZ1 582 aaKnown RBP27■■□□□ 1.91
PCDHA4-201ENST00000378125 KIF15Q9NS87 1388 aa27■■□□□ 1.91
PCDHA4-201ENST00000378125 MBD5Q9P267 1494 aa27■■□□□ 1.91
PCDHA4-201ENST00000378125 SHANK2Q9UPX8 1470 aa27■■□□□ 1.91
PCDHA4-201ENST00000378125 TTC37Q6PGP7 1564 aa26.98■■□□□ 1.91
PCDHA4-201ENST00000378125 PREX2Q70Z35 1606 aa26.97■■□□□ 1.91
PCDHA4-201ENST00000378125 C11orf95C9JLR9 678 aaPredicted RBP26.96■■□□□ 1.91
PCDHA4-201ENST00000378125 ABCC2Q92887 1545 aa26.96■■□□□ 1.91
PCDHA4-201ENST00000378125 ARHGAP5Q13017 1502 aa26.95■■□□□ 1.9
PCDHA4-201ENST00000378125 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.95■■□□□ 1.9
PCDHA4-201ENST00000378125 CCER2I3L3R5 266 aa26.94■■□□□ 1.9
PCDHA4-201ENST00000378125 CCDC141Q6ZP82 1450 aa26.93■■□□□ 1.9
PCDHA4-201ENST00000378125 ARHGEF5Q12774 1597 aa26.92■■□□□ 1.9
PCDHA4-201ENST00000378125 SYCP2Q9BX26 1530 aa26.92■■□□□ 1.9
PCDHA4-201ENST00000378125 CLASP1Q7Z460 1538 aa26.89■■□□□ 1.89
PCDHA4-201ENST00000378125 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.84■■□□□ 1.89
PCDHA4-201ENST00000378125 RSPH4AQ5TD94 716 aa26.83■■□□□ 1.89
PCDHA4-201ENST00000378125 CCDC7Q96M83 1385 aa26.83■■□□□ 1.89
PCDHA4-201ENST00000378125 ZCCHC11Q5TAX3 1644 aaKnown RBP26.83■■□□□ 1.89
PCDHA4-201ENST00000378125 KDM2AQ9Y2K7 1162 aa26.82■■□□□ 1.88
PCDHA4-201ENST00000378125 MYO5CQ9NQX4 1742 aa26.81■■□□□ 1.88
PCDHA4-201ENST00000378125 SUPT16HQ9Y5B9 1047 aaKnown RBP26.8■■□□□ 1.88
PCDHA4-201ENST00000378125 SPATA31E1Q6ZUB1 1445 aa26.79■■□□□ 1.88
PCDHA4-201ENST00000378125 KDM5DQ9BY66 1539 aa26.78■■□□□ 1.88
PCDHA4-201ENST00000378125 CNTLNQ9NXG0 1405 aa26.78■■□□□ 1.88
PCDHA4-201ENST00000378125 KIF7Q2M1P5 1343 aa26.77■■□□□ 1.88
PCDHA4-201ENST00000378125 POLR3GLQ9BT43 218 aa26.77■■□□□ 1.88
PCDHA4-201ENST00000378125 ARHGEF12Q9NZN5 1544 aa26.77■■□□□ 1.88
PCDHA4-201ENST00000378125 FAM135AQ9P2D6 1515 aa26.75■■□□□ 1.87
PCDHA4-201ENST00000378125 DCAF11Q8TEB1 546 aa26.73■■□□□ 1.87
PCDHA4-201ENST00000378125 EFCAB2Q5VUJ9 269 aa26.72■■□□□ 1.87
PCDHA4-201ENST00000378125 USP47Q96K76 1375 aa26.72■■□□□ 1.87
PCDHA4-201ENST00000378125 PLCH2O75038 1416 aa26.72■■□□□ 1.87
PCDHA4-201ENST00000378125 CNGB1Q14028 1251 aaPredicted RBP26.71■■□□□ 1.87
PCDHA4-201ENST00000378125 UHRF1BP1LA0JNW5 1464 aa26.71■■□□□ 1.87
PCDHA4-201ENST00000378125 PLEKHH2Q8IVE3 1493 aa26.7■■□□□ 1.87
PCDHA4-201ENST00000378125 CCDC184Q52MB2 194 aa26.7■■□□□ 1.86
PCDHA4-201ENST00000378125 MAST1Q9Y2H9 1570 aa26.68■■□□□ 1.86
PCDHA4-201ENST00000378125 RGL3Q3MIN7 710 aa26.67■■□□□ 1.86
PCDHA4-201ENST00000378125 CARD11Q9BXL7 1154 aa26.66■■□□□ 1.86
PCDHA4-201ENST00000378125 TRAPPC8Q9Y2L5 1435 aa26.65■■□□□ 1.86
PCDHA4-201ENST00000378125 PRKRIP1Q9H875 184 aaPredicted RBP26.64■■□□□ 1.86
PCDHA4-201ENST00000378125 HNRNPUQ00839 825 aaKnown RBP eCLIP26.64■■□□□ 1.85
PCDHA4-201ENST00000378125 AFAP1Q8N556 730 aa26.63■■□□□ 1.85
PCDHA4-201ENST00000378125 BCORL1Q5H9F3 1711 aa26.62■■□□□ 1.85
PCDHA4-201ENST00000378125 UHRF1BP1Q6BDS2 1440 aa26.61■■□□□ 1.85
PCDHA4-201ENST00000378125 CCDC144AA2RUR9 1427 aa26.61■■□□□ 1.85
PCDHA4-201ENST00000378125 PLXNC1O60486 1568 aa26.6■■□□□ 1.85
PCDHA4-201ENST00000378125 KDM5CP41229 1560 aa26.6■■□□□ 1.85
PCDHA4-201ENST00000378125 PELP1Q8IZL8 1130 aaKnown RBP26.6■■□□□ 1.85
PCDHA4-201ENST00000378125 BCANQ96GW7 911 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms