RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 L3MBTL2Q969R5 705 aa15.36■□□□□ 0.05
BEST1-201ENST00000378043 ANKRD30BQ9BXX2 1392 aa15.35■□□□□ 0.05
BEST1-201ENST00000378043 FKBP8Q14318 412 aa15.34■□□□□ 0.05
BEST1-201ENST00000378043 TSHZ2Q9NRE2 1034 aa15.33■□□□□ 0.05
BEST1-201ENST00000378043 PRG4Q92954 1404 aaPredicted RBP15.32■□□□□ 0.04
BEST1-201ENST00000378043 CEP170Q5SW79 1584 aa15.32■□□□□ 0.04
BEST1-201ENST00000378043 RPRD2Q5VT52 1461 aaKnown RBP15.32■□□□□ 0.04
BEST1-201ENST00000378043 EIF4G2P78344 907 aaKnown RBP eCLIP15.31■□□□□ 0.04
BEST1-201ENST00000378043 BCANQ96GW7 911 aa15.31■□□□□ 0.04
BEST1-201ENST00000378043 PLB1Q6P1J6 1458 aa15.3■□□□□ 0.04
BEST1-201ENST00000378043 TEX14Q8IWB6 1497 aa15.3■□□□□ 0.04
BEST1-201ENST00000378043 TROQ12816 1431 aaPredicted RBP15.3■□□□□ 0.04
BEST1-201ENST00000378043 CDK11AQ9UQ88 783 aaPredicted RBP15.3■□□□□ 0.04
BEST1-201ENST00000378043 MAGI1Q96QZ7 1491 aaPredicted RBP15.3■□□□□ 0.04
BEST1-201ENST00000378043 C11orf95C9JLR9 678 aaPredicted RBP15.29■□□□□ 0.04
BEST1-201ENST00000378043 NBPF8Q3BBV2 869 aa15.29■□□□□ 0.04
BEST1-201ENST00000378043 CAMSAP2Q08AD1 1489 aa15.28■□□□□ 0.04
BEST1-201ENST00000378043 KIF14Q15058 1648 aa15.28■□□□□ 0.04
BEST1-201ENST00000378043 SYNJ2O15056 1496 aa15.28■□□□□ 0.04
BEST1-201ENST00000378043 GPATCH8Q9UKJ3 1502 aaKnown RBP15.27■□□□□ 0.04
BEST1-201ENST00000378043 PZPP20742 1482 aa15.26■□□□□ 0.03
BEST1-201ENST00000378043 NCOA1Q15788 1441 aa15.26■□□□□ 0.03
BEST1-201ENST00000378043 SLC4A1APQ9BWU0 796 aaKnown RBP15.26■□□□□ 0.03
BEST1-201ENST00000378043 ITSN2Q9NZM3 1697 aa15.26■□□□□ 0.03
BEST1-201ENST00000378043 ADCY10Q96PN6 1610 aa15.26■□□□□ 0.03
BEST1-201ENST00000378043 CHMP7Q8WUX9 453 aaPredicted RBP15.26■□□□□ 0.03
BEST1-201ENST00000378043 CNTLNQ9NXG0 1405 aa15.25■□□□□ 0.03
BEST1-201ENST00000378043 CFDP1Q9UEE9 299 aaPredicted RBP15.25■□□□□ 0.03
BEST1-201ENST00000378043 ERCC6Q03468 1493 aa15.24■□□□□ 0.03
BEST1-201ENST00000378043 ADGBQ8N7X0 1667 aa15.24■□□□□ 0.03
BEST1-201ENST00000378043 SPATA31E1Q6ZUB1 1445 aa15.24■□□□□ 0.03
BEST1-201ENST00000378043 CCDC7Q96M83 1385 aa15.24■□□□□ 0.03
BEST1-201ENST00000378043 CROCC2H7BZ55 1655 aa15.23■□□□□ 0.03
BEST1-201ENST00000378043 NUP160Q12769 1436 aa15.23■□□□□ 0.03
BEST1-201ENST00000378043 CCDC184Q52MB2 194 aa15.22■□□□□ 0.03
BEST1-201ENST00000378043 JPH4Q96JJ6 628 aa15.22■□□□□ 0.03
BEST1-201ENST00000378043 ADGRL2O95490 1459 aa15.22■□□□□ 0.03
BEST1-201ENST00000378043 NEFLP07196 543 aa15.21■□□□□ 0.03
BEST1-201ENST00000378043 HNRNPUQ00839 825 aaKnown RBP eCLIP15.21■□□□□ 0.03
BEST1-201ENST00000378043 POLR1AO95602 1720 aaPredicted RBP15.21■□□□□ 0.03
BEST1-201ENST00000378043 FBLN2P98095 1184 aa15.21■□□□□ 0.02
BEST1-201ENST00000378043 CARMIL2Q6F5E8 1435 aa15.19■□□□□ 0.02
BEST1-201ENST00000378043 ZNF777Q9ULD5 760 aaPredicted RBP15.19■□□□□ 0.02
BEST1-201ENST00000378043 CDC42BPAQ5VT25 1732 aa15.19■□□□□ 0.02
BEST1-201ENST00000378043 PRKRIP1Q9H875 184 aaPredicted RBP15.18■□□□□ 0.02
BEST1-201ENST00000378043 MBD5Q9P267 1494 aa15.17■□□□□ 0.02
BEST1-201ENST00000378043 MYT1Q01538 1121 aa15.17■□□□□ 0.02
BEST1-201ENST00000378043 KIF7Q2M1P5 1343 aa15.17■□□□□ 0.02
BEST1-201ENST00000378043 ABCA8O94911 1581 aa15.17■□□□□ 0.02
BEST1-201ENST00000378043 KIAA1107Q9UPP5 1409 aa15.17■□□□□ 0.02
BEST1-201ENST00000378043 ABCC10Q5T3U5 1492 aa15.15■□□□□ 0.02
BEST1-201ENST00000378043 ATP10BO94823 1461 aa15.15■□□□□ 0.02
BEST1-201ENST00000378043 ANKRD30AQ9BXX3 1397 aa15.15■□□□□ 0.02
BEST1-201ENST00000378043 ANKRD50Q9ULJ7 1429 aa15.14■□□□□ 0.01
BEST1-201ENST00000378043 PKD2Q13563 968 aa15.13■□□□□ 0.01
BEST1-201ENST00000378043 PLEKHD1A6NEE1 506 aa15.12■□□□□ 0.01
BEST1-201ENST00000378043 BCORL1Q5H9F3 1711 aa15.12■□□□□ 0.01
BEST1-201ENST00000378043 SHANK2Q9UPX8 1470 aa15.1■□□□□ 0.01
BEST1-201ENST00000378043 C9orf84Q5VXU9 1444 aa15.1■□□□□ 0.01
BEST1-201ENST00000378043 MRS2Q9HD23 443 aa15.08■□□□□ 0.01
BEST1-201ENST00000378043 FAM9BQ8IZU0 186 aa15.08■□□□□ 0
BEST1-201ENST00000378043 KDM5CP41229 1560 aa15.08■□□□□ 0
BEST1-201ENST00000378043 USP47Q96K76 1375 aa15.07■□□□□ 0
BEST1-201ENST00000378043 NUP155O75694 1391 aa15.07■□□□□ 0
BEST1-201ENST00000378043 DHX29Q7Z478 1369 aaKnown RBP15.07■□□□□ 0
BEST1-201ENST00000378043 IRX6P78412 446 aaPredicted RBP15.07■□□□□ 0
BEST1-201ENST00000378043 KDM5DQ9BY66 1539 aa15.06■□□□□ 0
BEST1-201ENST00000378043 ZNF326Q5BKZ1 582 aaKnown RBP15.06■□□□□ 0
BEST1-201ENST00000378043 UHRF1BP1Q6BDS2 1440 aa15.05■□□□□ -0
BEST1-201ENST00000378043 RBM19Q9Y4C8 960 aaKnown RBP15.04■□□□□ -0
BEST1-201ENST00000378043 HNRNPMP52272 730 aaKnown RBP eCLIP15.03■□□□□ -0
BEST1-201ENST00000378043 ARHGEF5Q12774 1597 aa15.03■□□□□ -0
BEST1-201ENST00000378043 ZBED9Q6R2W3 1325 aa15.03■□□□□ -0
BEST1-201ENST00000378043 CDC42BPBQ9Y5S2 1711 aa15.03■□□□□ -0
BEST1-201ENST00000378043 PTPRGP23470 1445 aa15.03■□□□□ -0
BEST1-201ENST00000378043 RALGAPBQ86X10 1494 aa15.02■□□□□ -0
BEST1-201ENST00000378043 KIF15Q9NS87 1388 aa15.02■□□□□ -0
BEST1-201ENST00000378043 TSPY4P0CV99 314 aa15.02□□□□□ -0.01
BEST1-201ENST00000378043 TSPY10P0CW01 314 aa15.02□□□□□ -0.01
BEST1-201ENST00000378043 SAMD9LQ8IVG5 1584 aa15.01□□□□□ -0.01
BEST1-201ENST00000378043 ARHGEF12Q9NZN5 1544 aa15.01□□□□□ -0.01
BEST1-201ENST00000378043 PREX2Q70Z35 1606 aa14.99□□□□□ -0.01
BEST1-201ENST00000378043 ARID4BQ4LE39 1312 aaPredicted RBP14.99□□□□□ -0.01
BEST1-201ENST00000378043 CCDC141Q6ZP82 1450 aa14.97□□□□□ -0.01
BEST1-201ENST00000378043 ERICH6BQ5W0A0 696 aa14.97□□□□□ -0.01
BEST1-201ENST00000378043 POLR3GLQ9BT43 218 aa14.97□□□□□ -0.01
BEST1-201ENST00000378043 CARD11Q9BXL7 1154 aa14.96□□□□□ -0.01
BEST1-201ENST00000378043 FAM135AQ9P2D6 1515 aa14.96□□□□□ -0.02
BEST1-201ENST00000378043 CHD1O14646 1710 aa14.95□□□□□ -0.02
BEST1-201ENST00000378043 CNGB1Q14028 1251 aaPredicted RBP14.95□□□□□ -0.02
BEST1-201ENST00000378043 ANP32EQ9BTT0 268 aa14.95□□□□□ -0.02
BEST1-201ENST00000378043 KDM2AQ9Y2K7 1162 aa14.95□□□□□ -0.02
BEST1-201ENST00000378043 DCAF11Q8TEB1 546 aa14.94□□□□□ -0.02
BEST1-201ENST00000378043 TTC37Q6PGP7 1564 aa14.93□□□□□ -0.02
BEST1-201ENST00000378043 ST20-MTHFSA0A0A6YYL1 179 aa14.93□□□□□ -0.02
BEST1-201ENST00000378043 PPP4R2Q9NY27 417 aa14.93□□□□□ -0.02
BEST1-201ENST00000378043 ROCK2O75116 1388 aaKnown RBP14.92□□□□□ -0.02
BEST1-201ENST00000378043 SYCP2Q9BX26 1530 aa14.92□□□□□ -0.02
BEST1-201ENST00000378043 SHROOM2Q13796 1616 aa14.92□□□□□ -0.02
BEST1-201ENST00000378043 RSPH4AQ5TD94 716 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms