RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 FAM161AQ3B820 660 aa11.63□□□□□ -0.55
CRNKL1-201ENST00000377327 HSP90AB1P08238 724 aaKnown RBP11.62□□□□□ -0.55
CRNKL1-201ENST00000377327 FBLN2P98095 1184 aa11.62□□□□□ -0.55
CRNKL1-201ENST00000377327 MYH16Q9H6N6 1097 aa11.62□□□□□ -0.55
CRNKL1-201ENST00000377327 CDCA8Q53HL2 280 aa11.61□□□□□ -0.55
CRNKL1-201ENST00000377327 KTN1Q86UP2 1357 aaKnown RBP11.61□□□□□ -0.55
CRNKL1-201ENST00000377327 FTSJ3Q8IY81 847 aaKnown RBP11.61□□□□□ -0.55
CRNKL1-201ENST00000377327 NLRP13Q86W25 1043 aa11.6□□□□□ -0.55
CRNKL1-201ENST00000377327 BICRAQ9NZM4 1560 aa11.6□□□□□ -0.55
CRNKL1-201ENST00000377327 CENPQQ7L2Z9 268 aaPredicted RBP11.6□□□□□ -0.55
CRNKL1-201ENST00000377327 NEUROD2Q15784 382 aa11.59□□□□□ -0.55
CRNKL1-201ENST00000377327 DCAF11Q8TEB1 546 aa11.58□□□□□ -0.55
CRNKL1-201ENST00000377327 CFDP1Q9UEE9 299 aaPredicted RBP11.58□□□□□ -0.55
CRNKL1-201ENST00000377327 KIF21BO75037 1637 aa11.58□□□□□ -0.56
CRNKL1-201ENST00000377327 WASHC2AQ641Q2 1341 aa11.58□□□□□ -0.56
CRNKL1-201ENST00000377327 PLIN1O60240 522 aa11.57□□□□□ -0.56
CRNKL1-201ENST00000377327 GBP4Q96PP9 640 aa11.57□□□□□ -0.56
CRNKL1-201ENST00000377327 RRBP1Q9P2E9 1410 aaKnown RBP11.57□□□□□ -0.56
CRNKL1-201ENST00000377327 CUX2O14529 1486 aa11.57□□□□□ -0.56
CRNKL1-201ENST00000377327 ROCK2O75116 1388 aaKnown RBP11.57□□□□□ -0.56
CRNKL1-201ENST00000377327 CRBNQ96SW2 442 aa11.56□□□□□ -0.56
CRNKL1-201ENST00000377327 PKNOX2Q96KN3 472 aa11.56□□□□□ -0.56
CRNKL1-201ENST00000377327 TMF1P82094 1093 aa11.55□□□□□ -0.56
CRNKL1-201ENST00000377327 MYBBP1AQ9BQG0 1328 aaKnown RBP11.55□□□□□ -0.56
CRNKL1-201ENST00000377327 CNTLNQ9NXG0 1405 aa11.55□□□□□ -0.56
CRNKL1-201ENST00000377327 CCDC7Q96M83 1385 aa11.55□□□□□ -0.56
CRNKL1-201ENST00000377327 PTMSP20962 102 aa11.55□□□□□ -0.56
CRNKL1-201ENST00000377327 FAM43AQ8N2R8 423 aa11.55□□□□□ -0.56
CRNKL1-201ENST00000377327 BACH2Q9BYV9 841 aa11.54□□□□□ -0.56
CRNKL1-201ENST00000377327 GOLGA2Q08379 1002 aa11.54□□□□□ -0.56
CRNKL1-201ENST00000377327 KIF15Q9NS87 1388 aa11.53□□□□□ -0.56
CRNKL1-201ENST00000377327 PKD2Q13563 968 aa11.53□□□□□ -0.56
CRNKL1-201ENST00000377327 CFAP53Q96M91 514 aa11.53□□□□□ -0.56
CRNKL1-201ENST00000377327 CCDC18Q5T9S5 1454 aa11.52□□□□□ -0.57
CRNKL1-201ENST00000377327 RWDD1Q9H446 243 aaPredicted RBP11.51□□□□□ -0.57
CRNKL1-201ENST00000377327 CHGAP10645 457 aaKnown RBP11.51□□□□□ -0.57
CRNKL1-201ENST00000377327 FRAT2O75474 233 aaPredicted RBP11.51□□□□□ -0.57
CRNKL1-201ENST00000377327 KIF7Q2M1P5 1343 aa11.5□□□□□ -0.57
CRNKL1-201ENST00000377327 PMFBP1Q8TBY8 1022 aa11.5□□□□□ -0.57
CRNKL1-201ENST00000377327 UBE2Q2Q8WVN8 375 aa11.5□□□□□ -0.57
CRNKL1-201ENST00000377327 AKNAQ7Z591 1439 aa11.5□□□□□ -0.57
CRNKL1-201ENST00000377327 CDK11BP21127 795 aaKnown RBP11.49□□□□□ -0.57
CRNKL1-201ENST00000377327 CCDC184Q52MB2 194 aa11.49□□□□□ -0.57
CRNKL1-201ENST00000377327 PHLDB1Q86UU1 1377 aa11.49□□□□□ -0.57
CRNKL1-201ENST00000377327 WDR97A6NE52 1622 aa11.49□□□□□ -0.57
CRNKL1-201ENST00000377327 DDX11L8A8MPP1 907 aa11.49□□□□□ -0.57
CRNKL1-201ENST00000377327 ARID3AQ99856 593 aa11.49□□□□□ -0.57
CRNKL1-201ENST00000377327 MAPK8IP3Q9UPT6 1336 aa11.49□□□□□ -0.57
CRNKL1-201ENST00000377327 SLC24A1O60721 1099 aa11.49□□□□□ -0.57
CRNKL1-201ENST00000377327 CASC1Q6TDU7 716 aa11.49□□□□□ -0.57
CRNKL1-201ENST00000377327 UACAQ9BZF9 1416 aa11.48□□□□□ -0.57
CRNKL1-201ENST00000377327 MFAP1P55081 439 aaKnown RBP11.48□□□□□ -0.57
CRNKL1-201ENST00000377327 PLCB2Q00722 1185 aa11.47□□□□□ -0.57
CRNKL1-201ENST00000377327 SMG6Q86US8 1419 aaKnown RBP11.47□□□□□ -0.57
CRNKL1-201ENST00000377327 PLEKHD1A6NEE1 506 aa11.47□□□□□ -0.57
CRNKL1-201ENST00000377327 ST20-MTHFSA0A0A6YYL1 179 aa11.46□□□□□ -0.57
CRNKL1-201ENST00000377327 CHAF1AQ13111 956 aaPredicted RBP11.46□□□□□ -0.57
CRNKL1-201ENST00000377327 CHMP4BQ9H444 224 aaKnown RBP11.46□□□□□ -0.57
CRNKL1-201ENST00000377327 SMARCA4P51532 1647 aa11.46□□□□□ -0.58
CRNKL1-201ENST00000377327 USP47Q96K76 1375 aa11.45□□□□□ -0.58
CRNKL1-201ENST00000377327 FHOD3Q2V2M9 1422 aa11.45□□□□□ -0.58
CRNKL1-201ENST00000377327 SMARCA2P51531 1590 aa11.44□□□□□ -0.58
CRNKL1-201ENST00000377327 CALD1Q05682 793 aaKnown RBP11.44□□□□□ -0.58
CRNKL1-201ENST00000377327 KIAA2012Q0VF49 1180 aa11.43□□□□□ -0.58
CRNKL1-201ENST00000377327 SKOR2Q2VWA4 1001 aaPredicted RBP11.43□□□□□ -0.58
CRNKL1-201ENST00000377327 CHMP5Q9NZZ3 219 aa11.43□□□□□ -0.58
CRNKL1-201ENST00000377327 ARAP1Q96P48 1450 aa11.43□□□□□ -0.58
CRNKL1-201ENST00000377327 CENPJQ9HC77 1338 aaPredicted RBP11.42□□□□□ -0.58
CRNKL1-201ENST00000377327 MRE11P49959 708 aa11.42□□□□□ -0.58
CRNKL1-201ENST00000377327 TPRNQ4KMQ1 711 aa11.42□□□□□ -0.58
CRNKL1-201ENST00000377327 CGNL1Q0VF96 1302 aa11.42□□□□□ -0.58
CRNKL1-201ENST00000377327 LRRC9Q6ZRR7 1453 aa11.42□□□□□ -0.58
CRNKL1-201ENST00000377327 PNISRQ8TF01 805 aaKnown RBP11.41□□□□□ -0.58
CRNKL1-201ENST00000377327 CFAP44Q96MT7 982 aa11.4□□□□□ -0.58
CRNKL1-201ENST00000377327 CLUAP1Q96AJ1 413 aa11.4□□□□□ -0.58
CRNKL1-201ENST00000377327 NUP155O75694 1391 aa11.4□□□□□ -0.59
CRNKL1-201ENST00000377327 ZBTB7CA1YPR0 619 aa11.39□□□□□ -0.59
CRNKL1-201ENST00000377327 RRP9O43818 475 aaKnown RBP11.39□□□□□ -0.59
CRNKL1-201ENST00000377327 FAM13BQ9NYF5 915 aa11.39□□□□□ -0.59
CRNKL1-201ENST00000377327 BRD4O60885 1362 aaPredicted RBP11.39□□□□□ -0.59
CRNKL1-201ENST00000377327 FGD6Q6ZV73 1430 aa11.39□□□□□ -0.59
CRNKL1-201ENST00000377327 CCDC146Q8IYE0 955 aa11.39□□□□□ -0.59
CRNKL1-201ENST00000377327 CDCA7LQ96GN5 454 aa11.39□□□□□ -0.59
CRNKL1-201ENST00000377327 DDX49Q9Y6V7 483 aaKnown RBP11.39□□□□□ -0.59
CRNKL1-201ENST00000377327 PANK3Q9H999 370 aa11.38□□□□□ -0.59
CRNKL1-201ENST00000377327 IPO8O15397 1037 aaKnown RBP11.37□□□□□ -0.59
CRNKL1-201ENST00000377327 FOXD4L1Q9NU39 408 aa11.37□□□□□ -0.59
CRNKL1-201ENST00000377327 COG6Q9Y2V7 657 aa11.37□□□□□ -0.59
CRNKL1-201ENST00000377327 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.37□□□□□ -0.59
CRNKL1-201ENST00000377327 C11orf95C9JLR9 678 aaPredicted RBP11.37□□□□□ -0.59
CRNKL1-201ENST00000377327 ITPRIPQ8IWB1 547 aa11.37□□□□□ -0.59
CRNKL1-201ENST00000377327 E9PSI1 815 aa11.37□□□□□ -0.59
CRNKL1-201ENST00000377327 TPM2P07951 284 aa11.37□□□□□ -0.59
CRNKL1-201ENST00000377327 MORC1Q86VD1 984 aa11.37□□□□□ -0.59
CRNKL1-201ENST00000377327 EIF4G1Q04637 1599 aaKnown RBP11.36□□□□□ -0.59
CRNKL1-201ENST00000377327 TRAK2O60296 914 aa11.36□□□□□ -0.59
CRNKL1-201ENST00000377327 U2SURPO15042 1029 aaKnown RBP11.36□□□□□ -0.59
CRNKL1-201ENST00000377327 SYAP1Q96A49 352 aaPredicted RBP11.35□□□□□ -0.59
CRNKL1-201ENST00000377327 MAP7D2Q96T17 732 aa11.35□□□□□ -0.59
CRNKL1-201ENST00000377327 ANKRD30AQ9BXX3 1397 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms