RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 CCDC18Q5T9S5 1454 aa14.38□□□□□ -0.11
USP11-203ENST00000377080 KIAA0556O60303 1618 aa14.38□□□□□ -0.11
USP11-203ENST00000377080 UGGT2Q9NYU1 1516 aa14.38□□□□□ -0.11
USP11-203ENST00000377080 KDM5BQ9UGL1 1544 aa14.37□□□□□ -0.11
USP11-203ENST00000377080 PPP1R15AO75807 674 aaPredicted RBP14.37□□□□□ -0.11
USP11-203ENST00000377080 FAM50AQ14320 339 aaKnown RBP14.37□□□□□ -0.11
USP11-203ENST00000377080 MYOM3Q5VTT5 1437 aa14.36□□□□□ -0.11
USP11-203ENST00000377080 ITGAEP38570 1179 aa14.36□□□□□ -0.11
USP11-203ENST00000377080 AKNAQ7Z591 1439 aa14.35□□□□□ -0.11
USP11-203ENST00000377080 SOCS7O14512 581 aa14.35□□□□□ -0.11
USP11-203ENST00000377080 LRRIQ1Q96JM4 1722 aa14.35□□□□□ -0.11
USP11-203ENST00000377080 MTUS2Q5JR59 1369 aa14.34□□□□□ -0.11
USP11-203ENST00000377080 TCOF1Q13428 1488 aaKnown RBP14.34□□□□□ -0.11
USP11-203ENST00000377080 PTPRMP28827 1452 aa14.33□□□□□ -0.12
USP11-203ENST00000377080 NCOA2Q15596 1464 aa14.33□□□□□ -0.12
USP11-203ENST00000377080 PTPN23Q9H3S7 1636 aa14.33□□□□□ -0.12
USP11-203ENST00000377080 CCER2I3L3R5 266 aa14.32□□□□□ -0.12
USP11-203ENST00000377080 P3H3Q8IVL6 736 aa14.32□□□□□ -0.12
USP11-203ENST00000377080 WDR7Q9Y4E6 1490 aa14.31□□□□□ -0.12
USP11-203ENST00000377080 ADAMTSL3P82987 1691 aa14.31□□□□□ -0.12
USP11-203ENST00000377080 ILDR2Q71H61 639 aa14.31□□□□□ -0.12
USP11-203ENST00000377080 MAGI3Q5TCQ9 1506 aa14.31□□□□□ -0.12
USP11-203ENST00000377080 HECW1Q76N89 1606 aa14.3□□□□□ -0.12
USP11-203ENST00000377080 DISP3Q9P2K9 1392 aa14.3□□□□□ -0.12
USP11-203ENST00000377080 MIA2Q96PC5 1412 aa14.3□□□□□ -0.12
USP11-203ENST00000377080 NAIPQ13075 1403 aa14.29□□□□□ -0.12
USP11-203ENST00000377080 CD109Q6YHK3 1445 aa14.29□□□□□ -0.12
USP11-203ENST00000377080 GCC2Q8IWJ2 1684 aa14.27□□□□□ -0.12
USP11-203ENST00000377080 SIN3AQ96ST3 1273 aa14.26□□□□□ -0.13
USP11-203ENST00000377080 ATP1B4Q9UN42 357 aaPredicted RBP14.26□□□□□ -0.13
USP11-203ENST00000377080 PTPRKQ15262 1439 aa14.25□□□□□ -0.13
USP11-203ENST00000377080 TONSLQ96HA7 1378 aa14.23□□□□□ -0.13
USP11-203ENST00000377080 MADDQ8WXG6 1647 aa14.23□□□□□ -0.13
USP11-203ENST00000377080 ABCA8O94911 1581 aa14.23□□□□□ -0.13
USP11-203ENST00000377080 BCORL1Q5H9F3 1711 aa14.23□□□□□ -0.13
USP11-203ENST00000377080 CERKQ8TCT0 537 aa14.22□□□□□ -0.13
USP11-203ENST00000377080 KCNH8Q96L42 1107 aa14.22□□□□□ -0.13
USP11-203ENST00000377080 ARAP3Q8WWN8 1544 aa14.21□□□□□ -0.13
USP11-203ENST00000377080 SUPT16HQ9Y5B9 1047 aaKnown RBP14.21□□□□□ -0.13
USP11-203ENST00000377080 ROCK1Q13464 1354 aa14.2□□□□□ -0.14
USP11-203ENST00000377080 SPATA31D1Q6ZQQ2 1576 aa14.18□□□□□ -0.14
USP11-203ENST00000377080 RIMS1Q86UR5 1692 aaKnown RBP14.18□□□□□ -0.14
USP11-203ENST00000377080 HSPA2P54652 639 aa14.17□□□□□ -0.14
USP11-203ENST00000377080 DDX10Q13206 875 aaKnown RBP14.17□□□□□ -0.14
USP11-203ENST00000377080 ANP32CO43423 234 aa14.16□□□□□ -0.14
USP11-203ENST00000377080 ARID4BQ4LE39 1312 aaPredicted RBP14.15□□□□□ -0.14
USP11-203ENST00000377080 ARID3CA6NKF2 412 aa14.12□□□□□ -0.15
USP11-203ENST00000377080 DNMT1P26358 1616 aaKnown RBP14.11□□□□□ -0.15
USP11-203ENST00000377080 RAPGEF3O95398 923 aa14.1□□□□□ -0.15
USP11-203ENST00000377080 PLPPR3Q6T4P5 718 aa14.1□□□□□ -0.15
USP11-203ENST00000377080 RAPGEF6Q8TEU7 1601 aa14.09□□□□□ -0.15
USP11-203ENST00000377080 CDK11AQ9UQ88 783 aaPredicted RBP14.09□□□□□ -0.15
USP11-203ENST00000377080 DENND4BO75064 1496 aaPredicted RBP14.09□□□□□ -0.15
USP11-203ENST00000377080 ATP10BO94823 1461 aa14.08□□□□□ -0.16
USP11-203ENST00000377080 FRMPD1Q5SYB0 1578 aa14.08□□□□□ -0.16
USP11-203ENST00000377080 ABCA9Q8IUA7 1624 aa14.07□□□□□ -0.16
USP11-203ENST00000377080 MPHOSPH9Q99550 1183 aa14.06□□□□□ -0.16
USP11-203ENST00000377080 DAPK1P53355 1430 aa14.06□□□□□ -0.16
USP11-203ENST00000377080 ARHGEF40Q8TER5 1519 aa14.05□□□□□ -0.16
USP11-203ENST00000377080 ITSN2Q9NZM3 1697 aa14.04□□□□□ -0.16
USP11-203ENST00000377080 RPRD2Q5VT52 1461 aaKnown RBP14.04□□□□□ -0.16
USP11-203ENST00000377080 NEO1Q92859 1461 aa14.04□□□□□ -0.16
USP11-203ENST00000377080 POLR1AO95602 1720 aaPredicted RBP14.04□□□□□ -0.16
USP11-203ENST00000377080 ANKRD30BQ9BXX2 1392 aa14.03□□□□□ -0.16
USP11-203ENST00000377080 ABCC5O15440 1437 aa14.03□□□□□ -0.16
USP11-203ENST00000377080 NUP153P49790 1475 aaKnown RBP14.03□□□□□ -0.16
USP11-203ENST00000377080 CDK13Q14004 1512 aaKnown RBP14.03□□□□□ -0.16
USP11-203ENST00000377080 EIF4G2P78344 907 aaKnown RBP eCLIP14.02□□□□□ -0.17
USP11-203ENST00000377080 FER1L4A9Z1Z3 1794 aa14.01□□□□□ -0.17
USP11-203ENST00000377080 ERICH6BQ5W0A0 696 aa14.01□□□□□ -0.17
USP11-203ENST00000377080 RRP7BPQ9NSQ0 103 aa14.01□□□□□ -0.17
USP11-203ENST00000377080 ADGBQ8N7X0 1667 aa14.01□□□□□ -0.17
USP11-203ENST00000377080 ADGRL2O95490 1459 aa14□□□□□ -0.17
USP11-203ENST00000377080 TROQ12816 1431 aaPredicted RBP14□□□□□ -0.17
USP11-203ENST00000377080 PREX1Q8TCU6 1659 aa14□□□□□ -0.17
USP11-203ENST00000377080 FANCAO15360 1455 aa13.99□□□□□ -0.17
USP11-203ENST00000377080 POGZQ7Z3K3 1410 aa13.99□□□□□ -0.17
USP11-203ENST00000377080 RICTORQ6R327 1708 aa13.99□□□□□ -0.17
USP11-203ENST00000377080 NEFLP07196 543 aa13.99□□□□□ -0.17
USP11-203ENST00000377080 TRIM52Q96A61 297 aa13.98□□□□□ -0.17
USP11-203ENST00000377080 STRCQ7RTU9 1775 aa13.98□□□□□ -0.17
USP11-203ENST00000377080 SIGLEC1Q9BZZ2 1709 aa13.98□□□□□ -0.17
USP11-203ENST00000377080 NCOA1Q15788 1441 aa13.98□□□□□ -0.17
USP11-203ENST00000377080 TTC37Q6PGP7 1564 aa13.97□□□□□ -0.17
USP11-203ENST00000377080 HSPA5P11021 654 aaKnown RBP13.96□□□□□ -0.17
USP11-203ENST00000377080 TSHZ2Q9NRE2 1034 aa13.96□□□□□ -0.17
USP11-203ENST00000377080 CNTLNQ9NXG0 1405 aa13.96□□□□□ -0.18
USP11-203ENST00000377080 WASHC2AQ641Q2 1341 aa13.95□□□□□ -0.18
USP11-203ENST00000377080 CROCC2H7BZ55 1655 aa13.95□□□□□ -0.18
USP11-203ENST00000377080 L3MBTL2Q969R5 705 aa13.95□□□□□ -0.18
USP11-203ENST00000377080 DMRT2Q9Y5R5 561 aa13.95□□□□□ -0.18
USP11-203ENST00000377080 SPATA31E1Q6ZUB1 1445 aa13.95□□□□□ -0.18
USP11-203ENST00000377080 YEATS2Q9ULM3 1422 aa13.95□□□□□ -0.18
USP11-203ENST00000377080 CHIC2Q9UKJ5 165 aa13.94□□□□□ -0.18
USP11-203ENST00000377080 GPATCH8Q9UKJ3 1502 aaKnown RBP13.94□□□□□ -0.18
USP11-203ENST00000377080 MLECQ14165 292 aa13.93□□□□□ -0.18
USP11-203ENST00000377080 CCDC7Q96M83 1385 aa13.93□□□□□ -0.18
USP11-203ENST00000377080 SHANK2Q9UPX8 1470 aa13.93□□□□□ -0.18
USP11-203ENST00000377080 ZFYVE16Q7Z3T8 1539 aa13.92□□□□□ -0.18
USP11-203ENST00000377080 FKBP8Q14318 412 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms