RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 KIF7Q2M1P5 1343 aa22.5■■□□□ 1.19
TRIM39-201ENST00000376656 AKNAQ7Z591 1439 aa22.49■■□□□ 1.19
TRIM39-201ENST00000376656 SMG6Q86US8 1419 aaKnown RBP22.45■■□□□ 1.18
TRIM39-201ENST00000376656 SPATA31E1Q6ZUB1 1445 aa22.44■■□□□ 1.18
TRIM39-201ENST00000376656 CNGB1Q14028 1251 aaPredicted RBP22.42■■□□□ 1.18
TRIM39-201ENST00000376656 TDRD9Q8NDG6 1382 aaKnown RBP22.42■■□□□ 1.18
TRIM39-201ENST00000376656 RPRD2Q5VT52 1461 aaKnown RBP22.42■■□□□ 1.18
TRIM39-201ENST00000376656 TEX14Q8IWB6 1497 aa22.42■■□□□ 1.18
TRIM39-201ENST00000376656 ANKRD30BQ9BXX2 1392 aa22.42■■□□□ 1.18
TRIM39-201ENST00000376656 ABCA5Q8WWZ7 1642 aa22.41■■□□□ 1.18
TRIM39-201ENST00000376656 POLR1AO95602 1720 aaPredicted RBP22.41■■□□□ 1.18
TRIM39-201ENST00000376656 PRKCSHP14314 528 aaPredicted RBP22.41■■□□□ 1.18
TRIM39-201ENST00000376656 NESP48681 1621 aa22.4■■□□□ 1.18
TRIM39-201ENST00000376656 CCDC136Q96JN2 1154 aa22.39■■□□□ 1.18
TRIM39-201ENST00000376656 NUDCQ9Y266 331 aa22.39■■□□□ 1.18
TRIM39-201ENST00000376656 RNF123Q5XPI4 1314 aa22.38■■□□□ 1.17
TRIM39-201ENST00000376656 SENP3-EIF4A1A0A087X0R7 540 aa22.37■■□□□ 1.17
TRIM39-201ENST00000376656 IPO9Q96P70 1041 aaKnown RBP22.36■■□□□ 1.17
TRIM39-201ENST00000376656 KIF21AQ7Z4S6 1674 aa22.36■■□□□ 1.17
TRIM39-201ENST00000376656 DHX29Q7Z478 1369 aaKnown RBP22.35■■□□□ 1.17
TRIM39-201ENST00000376656 ANP32AP39687 249 aaKnown RBP22.35■■□□□ 1.17
TRIM39-201ENST00000376656 MIA2Q96PC5 1412 aa22.34■■□□□ 1.17
TRIM39-201ENST00000376656 GAPVD1Q14C86 1478 aa22.33■■□□□ 1.17
TRIM39-201ENST00000376656 ARID3CA6NKF2 412 aa22.32■■□□□ 1.16
TRIM39-201ENST00000376656 URB2Q14146 1524 aaKnown RBP22.32■■□□□ 1.16
TRIM39-201ENST00000376656 EPRSP07814 1512 aaKnown RBP22.32■■□□□ 1.16
TRIM39-201ENST00000376656 CDK13Q14004 1512 aaKnown RBP22.32■■□□□ 1.16
TRIM39-201ENST00000376656 POLR3GLQ9BT43 218 aa22.31■■□□□ 1.16
TRIM39-201ENST00000376656 SLC4A1APQ9BWU0 796 aaKnown RBP22.29■■□□□ 1.16
TRIM39-201ENST00000376656 LAMC3Q9Y6N6 1575 aa22.29■■□□□ 1.16
TRIM39-201ENST00000376656 ZBTB47Q9UFB7 747 aaPredicted RBP22.29■■□□□ 1.16
TRIM39-201ENST00000376656 DAPK1P53355 1430 aa22.27■■□□□ 1.16
TRIM39-201ENST00000376656 BCORL1Q5H9F3 1711 aa22.27■■□□□ 1.15
TRIM39-201ENST00000376656 ROCK1Q13464 1354 aa22.25■■□□□ 1.15
TRIM39-201ENST00000376656 RTL5Q5HYW3 569 aaPredicted RBP22.24■■□□□ 1.15
TRIM39-201ENST00000376656 ABCC5O15440 1437 aa22.23■■□□□ 1.15
TRIM39-201ENST00000376656 PNISRQ8TF01 805 aaKnown RBP22.23■■□□□ 1.15
TRIM39-201ENST00000376656 USP47Q96K76 1375 aa22.22■■□□□ 1.15
TRIM39-201ENST00000376656 ZNF644Q9H582 1327 aaPredicted RBP22.21■■□□□ 1.15
TRIM39-201ENST00000376656 ZNF326Q5BKZ1 582 aaKnown RBP22.21■■□□□ 1.15
TRIM39-201ENST00000376656 DNMT1P26358 1616 aaKnown RBP22.2■■□□□ 1.14
TRIM39-201ENST00000376656 WDR62O43379 1518 aa22.19■■□□□ 1.14
TRIM39-201ENST00000376656 MBD5Q9P267 1494 aa22.18■■□□□ 1.14
TRIM39-201ENST00000376656 TMC1Q8TDI8 760 aa22.18■■□□□ 1.14
TRIM39-201ENST00000376656 PZPP20742 1482 aa22.17■■□□□ 1.14
TRIM39-201ENST00000376656 NPM2Q86SE8 214 aaKnown RBP22.15■■□□□ 1.14
TRIM39-201ENST00000376656 IQGAP2Q13576 1575 aa22.14■■□□□ 1.13
TRIM39-201ENST00000376656 KDM5CP41229 1560 aa22.13■■□□□ 1.13
TRIM39-201ENST00000376656 EXOC6Q8TAG9 804 aa22.12■■□□□ 1.13
TRIM39-201ENST00000376656 RRP1P56182 461 aaKnown RBP22.11■■□□□ 1.13
TRIM39-201ENST00000376656 KIF14Q15058 1648 aa22.1■■□□□ 1.13
TRIM39-201ENST00000376656 ARID4BQ4LE39 1312 aaPredicted RBP22.1■■□□□ 1.13
TRIM39-201ENST00000376656 LRPPRCP42704 1394 aaKnown RBP22.09■■□□□ 1.13
TRIM39-201ENST00000376656 KIAA1107Q9UPP5 1409 aa22.07■■□□□ 1.12
TRIM39-201ENST00000376656 TCERG1O14776 1098 aaKnown RBP22.06■■□□□ 1.12
TRIM39-201ENST00000376656 LAS1LQ9Y4W2 734 aaKnown RBP22.06■■□□□ 1.12
TRIM39-201ENST00000376656 IL27Q8NEV9 243 aa22.06■■□□□ 1.12
TRIM39-201ENST00000376656 ROCK2O75116 1388 aaKnown RBP22.06■■□□□ 1.12
TRIM39-201ENST00000376656 PDE4AP27815 886 aa22.05■■□□□ 1.12
TRIM39-201ENST00000376656 KIF15Q9NS87 1388 aa22.05■■□□□ 1.12
TRIM39-201ENST00000376656 ANO8Q9HCE9 1232 aaPredicted RBP22.05■■□□□ 1.12
TRIM39-201ENST00000376656 PKD2Q13563 968 aa22.05■■□□□ 1.12
TRIM39-201ENST00000376656 TARBP1Q13395 1621 aaKnown RBP22.04■■□□□ 1.12
TRIM39-201ENST00000376656 RCAN3Q9UKA8 241 aa22.03■■□□□ 1.12
TRIM39-201ENST00000376656 SALL2Q9Y467 1007 aaPredicted RBP22.03■■□□□ 1.12
TRIM39-201ENST00000376656 BRD4O60885 1362 aaPredicted RBP22.02■■□□□ 1.12
TRIM39-201ENST00000376656 MYBBP1AQ9BQG0 1328 aaKnown RBP22.02■■□□□ 1.12
TRIM39-201ENST00000376656 PBRM1Q86U86 1689 aa22.02■■□□□ 1.12
TRIM39-201ENST00000376656 NEFMP07197 916 aa22.01■■□□□ 1.11
TRIM39-201ENST00000376656 CARD11Q9BXL7 1154 aa22.01■■□□□ 1.11
TRIM39-201ENST00000376656 BACH2Q9BYV9 841 aa22.01■■□□□ 1.11
TRIM39-201ENST00000376656 RALGAPBQ86X10 1494 aa22■■□□□ 1.11
TRIM39-201ENST00000376656 CAMSAP2Q08AD1 1489 aa21.98■■□□□ 1.11
TRIM39-201ENST00000376656 NUP153P49790 1475 aaKnown RBP21.98■■□□□ 1.11
TRIM39-201ENST00000376656 UHRF1BP1Q6BDS2 1440 aa21.98■■□□□ 1.11
TRIM39-201ENST00000376656 ST20-MTHFSA0A0A6YYL1 179 aa21.97■■□□□ 1.11
TRIM39-201ENST00000376656 ADAMTS12P58397 1594 aa21.97■■□□□ 1.11
TRIM39-201ENST00000376656 RALBP1Q15311 655 aa21.97■■□□□ 1.11
TRIM39-201ENST00000376656 RTN4Q9NQC3 1192 aaKnown RBP21.96■■□□□ 1.11
TRIM39-201ENST00000376656 ADGBQ8N7X0 1667 aa21.96■■□□□ 1.11
TRIM39-201ENST00000376656 PDS5BQ9NTI5 1447 aa21.95■■□□□ 1.1
TRIM39-201ENST00000376656 MS4A1P11836 297 aa21.95■■□□□ 1.1
TRIM39-201ENST00000376656 CFDP1Q9UEE9 299 aaPredicted RBP21.95■■□□□ 1.1
TRIM39-201ENST00000376656 USP35Q9P2H5 1018 aa21.93■■□□□ 1.1
TRIM39-201ENST00000376656 ZNF777Q9ULD5 760 aaPredicted RBP21.93■■□□□ 1.1
TRIM39-201ENST00000376656 KDM2AQ9Y2K7 1162 aa21.93■■□□□ 1.1
TRIM39-201ENST00000376656 KTN1Q86UP2 1357 aaKnown RBP21.93■■□□□ 1.1
TRIM39-201ENST00000376656 PRG4Q92954 1404 aaPredicted RBP21.92■■□□□ 1.1
TRIM39-201ENST00000376656 CDCA7LQ96GN5 454 aa21.92■■□□□ 1.1
TRIM39-201ENST00000376656 SKAP1Q86WV1 359 aa21.91■■□□□ 1.1
TRIM39-201ENST00000376656 E9PCH4 1651 aa21.91■■□□□ 1.1
TRIM39-201ENST00000376656 ADGRL2O95490 1459 aa21.91■■□□□ 1.1
TRIM39-201ENST00000376656 RAPGEF6Q8TEU7 1601 aa21.9■■□□□ 1.1
TRIM39-201ENST00000376656 KIAA0556O60303 1618 aa21.9■■□□□ 1.1
TRIM39-201ENST00000376656 DISP1Q96F81 1524 aa21.9■■□□□ 1.1
TRIM39-201ENST00000376656 PLIN1O60240 522 aa21.9■■□□□ 1.1
TRIM39-201ENST00000376656 PDE3BQ13370 1112 aa21.89■■□□□ 1.09
TRIM39-201ENST00000376656 PPM1GO15355 546 aaPredicted RBP21.88■■□□□ 1.09
TRIM39-201ENST00000376656 NLRP13Q86W25 1043 aa21.88■■□□□ 1.09
TRIM39-201ENST00000376656 ANKRD50Q9ULJ7 1429 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms