RNA–Protein interactions for RNA: ENST00000376486.3

MTHFR-201, Transcript of methylenetetrahydrofolate reductase, humanhuman

TSL 1 (best)

Gene MTHFR, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-201ENST00000376486 YEATS2Q9ULM3 1422 aa31.65■■■□□ 2.66
MTHFR-201ENST00000376486 MAGI2Q86UL8 1455 aa31.65■■■□□ 2.66
MTHFR-201ENST00000376486 RIMS1Q86UR5 1692 aaKnown RBP31.64■■■□□ 2.66
MTHFR-201ENST00000376486 CLIP1P30622 1438 aa31.64■■■□□ 2.66
MTHFR-201ENST00000376486 TROQ12816 1431 aaPredicted RBP31.63■■■□□ 2.65
MTHFR-201ENST00000376486 LRRIQ1Q96JM4 1722 aa31.62■■■□□ 2.65
MTHFR-201ENST00000376486 EFCAB2Q5VUJ9 269 aa31.6■■■□□ 2.65
MTHFR-201ENST00000376486 PCF11O94913 1555 aaKnown RBP31.58■■■□□ 2.65
MTHFR-201ENST00000376486 ARHGAP5Q13017 1502 aa31.58■■■□□ 2.65
MTHFR-201ENST00000376486 SIGLEC1Q9BZZ2 1709 aa31.58■■■□□ 2.65
MTHFR-201ENST00000376486 CCDC18Q5T9S5 1454 aa31.52■■■□□ 2.64
MTHFR-201ENST00000376486 CASKIN1Q8WXD9 1431 aa31.52■■■□□ 2.64
MTHFR-201ENST00000376486 ZNF518AQ6AHZ1 1483 aa31.5■■■□□ 2.63
MTHFR-201ENST00000376486 MLECQ14165 292 aa31.49■■■□□ 2.63
MTHFR-201ENST00000376486 PLPPR3Q6T4P5 718 aa31.49■■■□□ 2.63
MTHFR-201ENST00000376486 LMTK3Q96Q04 1460 aa31.48■■■□□ 2.63
MTHFR-201ENST00000376486 C9orf84Q5VXU9 1444 aa31.48■■■□□ 2.63
MTHFR-201ENST00000376486 FER1L4A9Z1Z3 1794 aa31.48■■■□□ 2.63
MTHFR-201ENST00000376486 ATP10AO60312 1499 aa31.47■■■□□ 2.63
MTHFR-201ENST00000376486 CDC42BPBQ9Y5S2 1711 aa31.44■■■□□ 2.62
MTHFR-201ENST00000376486 KDM5CP41229 1560 aa31.43■■■□□ 2.62
MTHFR-201ENST00000376486 PREX2Q70Z35 1606 aa31.43■■■□□ 2.62
MTHFR-201ENST00000376486 FYCO1Q9BQS8 1478 aa31.42■■■□□ 2.62
MTHFR-201ENST00000376486 MYT1LQ9UL68 1186 aa31.41■■■□□ 2.62
MTHFR-201ENST00000376486 AFAP1Q8N556 730 aa31.38■■■□□ 2.61
MTHFR-201ENST00000376486 ARHGEF12Q9NZN5 1544 aa31.38■■■□□ 2.61
MTHFR-201ENST00000376486 ABCC1P33527 1531 aa31.35■■■□□ 2.61
MTHFR-201ENST00000376486 DIP2CQ9Y2E4 1556 aa31.34■■■□□ 2.61
MTHFR-201ENST00000376486 ITSN2Q9NZM3 1697 aa31.32■■■□□ 2.6
MTHFR-201ENST00000376486 CDC42BPAQ5VT25 1732 aa31.32■■■□□ 2.6
MTHFR-201ENST00000376486 HSPA2P54652 639 aa31.3■■■□□ 2.6
MTHFR-201ENST00000376486 ABCA6Q8N139 1617 aa31.3■■■□□ 2.6
MTHFR-201ENST00000376486 MLH3Q9UHC1 1453 aa31.27■■■□□ 2.6
MTHFR-201ENST00000376486 REREQ9P2R6 1566 aa31.27■■■□□ 2.6
MTHFR-201ENST00000376486 TRAPPC8Q9Y2L5 1435 aa31.27■■■□□ 2.6
MTHFR-201ENST00000376486 PREX1Q8TCU6 1659 aa31.21■■■□□ 2.59
MTHFR-201ENST00000376486 FBXO41Q8TF61 875 aa31.2■■■□□ 2.59
MTHFR-201ENST00000376486 ZNF777Q9ULD5 760 aaPredicted RBP31.2■■■□□ 2.59
MTHFR-201ENST00000376486 SAMD9LQ8IVG5 1584 aa31.18■■■□□ 2.58
MTHFR-201ENST00000376486 CEBPAP49715 358 aaPredicted RBP31.18■■■□□ 2.58
MTHFR-201ENST00000376486 KIDINS220Q9ULH0 1771 aa31.17■■■□□ 2.58
MTHFR-201ENST00000376486 SYCP2Q9BX26 1530 aa31.16■■■□□ 2.58
MTHFR-201ENST00000376486 GPATCH8Q9UKJ3 1502 aaKnown RBP31.16■■■□□ 2.58
MTHFR-201ENST00000376486 AGLP35573 1532 aa31.15■■■□□ 2.58
MTHFR-201ENST00000376486 ESF1Q9H501 851 aaKnown RBP31.12■■■□□ 2.57
MTHFR-201ENST00000376486 MTUS2Q5JR59 1369 aa31.12■■■□□ 2.57
MTHFR-201ENST00000376486 CCNB3Q8WWL7 1395 aa31.1■■■□□ 2.57
MTHFR-201ENST00000376486 C3P01024 1663 aa31.08■■■□□ 2.57
MTHFR-201ENST00000376486 UHRF1BP1Q6BDS2 1440 aa31.07■■■□□ 2.57
MTHFR-201ENST00000376486 CFDP1Q9UEE9 299 aaPredicted RBP31.07■■■□□ 2.56
MTHFR-201ENST00000376486 PLEKHH2Q8IVE3 1493 aa31.07■■■□□ 2.56
MTHFR-201ENST00000376486 SPAG9O60271 1321 aaKnown RBP31.05■■■□□ 2.56
MTHFR-201ENST00000376486 HNRNPMP52272 730 aaKnown RBP eCLIP31.05■■■□□ 2.56
MTHFR-201ENST00000376486 EHBP1L1Q8N3D4 1523 aa31.03■■■□□ 2.56
MTHFR-201ENST00000376486 CEP162Q5TB80 1403 aa31.03■■■□□ 2.56
MTHFR-201ENST00000376486 ATP7AQ04656 1500 aa31.03■■■□□ 2.56
MTHFR-201ENST00000376486 KIAA1107Q9UPP5 1409 aa31.02■■■□□ 2.56
MTHFR-201ENST00000376486 INO80Q9ULG1 1556 aaPredicted RBP31■■■□□ 2.55
MTHFR-201ENST00000376486 CNTLNQ9NXG0 1405 aa31■■■□□ 2.55
MTHFR-201ENST00000376486 TIAM1Q13009 1591 aa30.99■■■□□ 2.55
MTHFR-201ENST00000376486 SUPT6HQ7KZ85 1726 aaKnown RBP30.98■■■□□ 2.55
MTHFR-201ENST00000376486 SETD1BQ9UPS6 1966 aaKnown RBP30.97■■■□□ 2.55
MTHFR-201ENST00000376486 STRCQ7RTU9 1775 aa30.92■■■□□ 2.54
MTHFR-201ENST00000376486 MROH2AA6NES4 1674 aa30.92■■■□□ 2.54
MTHFR-201ENST00000376486 PLXNC1O60486 1568 aa30.92■■■□□ 2.54
MTHFR-201ENST00000376486 A2MP01023 1474 aa30.91■■■□□ 2.54
MTHFR-201ENST00000376486 CERKQ8TCT0 537 aa30.9■■■□□ 2.54
MTHFR-201ENST00000376486 DMRT2Q9Y5R5 561 aa30.9■■■□□ 2.54
MTHFR-201ENST00000376486 ZNF644Q9H582 1327 aaPredicted RBP30.87■■■□□ 2.53
MTHFR-201ENST00000376486 ADGBQ8N7X0 1667 aa30.87■■■□□ 2.53
MTHFR-201ENST00000376486 CLTCQ00610 1675 aaKnown RBP30.85■■■□□ 2.53
MTHFR-201ENST00000376486 NPATQ14207 1427 aa30.83■■■□□ 2.53
MTHFR-201ENST00000376486 ZMYM3Q14202 1370 aa30.82■■■□□ 2.52
MTHFR-201ENST00000376486 MBD5Q9P267 1494 aa30.82■■■□□ 2.52
MTHFR-201ENST00000376486 NCOA2Q15596 1464 aa30.81■■■□□ 2.52
MTHFR-201ENST00000376486 GGT6Q6P531 493 aa30.79■■■□□ 2.52
MTHFR-201ENST00000376486 RTEL1-TNFRSF6BF6WH68 1400 aa30.76■■■□□ 2.51
MTHFR-201ENST00000376486 PTPRTO14522 1441 aa30.76■■■□□ 2.51
MTHFR-201ENST00000376486 CAMSAP2Q08AD1 1489 aa30.76■■■□□ 2.51
MTHFR-201ENST00000376486 CCDC141Q6ZP82 1450 aa30.75■■■□□ 2.51
MTHFR-201ENST00000376486 NCOA1Q15788 1441 aa30.74■■■□□ 2.51
MTHFR-201ENST00000376486 MYO3AQ8NEV4 1616 aa30.73■■■□□ 2.51
MTHFR-201ENST00000376486 CAMSAP1Q5T5Y3 1602 aa30.73■■■□□ 2.51
MTHFR-201ENST00000376486 VPS8Q8N3P4 1428 aa30.71■■■□□ 2.51
MTHFR-201ENST00000376486 ZNF142P52746 1687 aaPredicted RBP30.69■■■□□ 2.5
MTHFR-201ENST00000376486 PTPRKQ15262 1439 aa30.69■■■□□ 2.5
MTHFR-201ENST00000376486 PPP6R1Q9UPN7 881 aa30.68■■■□□ 2.5
MTHFR-201ENST00000376486 DHX29Q7Z478 1369 aaKnown RBP30.67■■■□□ 2.5
MTHFR-201ENST00000376486 CEP170BQ9Y4F5 1589 aaPredicted RBP30.66■■■□□ 2.5
MTHFR-201ENST00000376486 LOC105371045A0A1W2PR82 267 aa30.65■■■□□ 2.5
MTHFR-201ENST00000376486 LRRC9Q6ZRR7 1453 aa30.64■■■□□ 2.5
MTHFR-201ENST00000376486 RSPH4AQ5TD94 716 aa30.63■■■□□ 2.49
MTHFR-201ENST00000376486 ARHGEF5Q12774 1597 aa30.62■■■□□ 2.49
MTHFR-201ENST00000376486 KIF3BO15066 747 aa30.6■■■□□ 2.49
MTHFR-201ENST00000376486 LTBP4Q8N2S1 1624 aa30.58■■■□□ 2.49
MTHFR-201ENST00000376486 KDM5DQ9BY66 1539 aa30.57■■■□□ 2.49
MTHFR-201ENST00000376486 PLA2R1Q13018 1463 aa30.57■■■□□ 2.48
MTHFR-201ENST00000376486 NCKAP5LQ9HCH0 1330 aa30.57■■■□□ 2.48
MTHFR-201ENST00000376486 FAM135AQ9P2D6 1515 aa30.56■■■□□ 2.48
MTHFR-201ENST00000376486 TSPY4P0CV99 314 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms