RNA–Protein interactions for RNA: ENST00000376486.3

MTHFR-201, Transcript of methylenetetrahydrofolate reductase, humanhuman

TSL 1 (best)

Gene MTHFR, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-201ENST00000376486 NISCHQ9Y2I1 1504 aa48.27■■■■■ 5.32
MTHFR-201ENST00000376486 CCDC180Q9P1Z9 1646 aa43.36■■■■■ 4.53
MTHFR-201ENST00000376486 ABCC9O60706 1549 aa43.3■■■■■ 4.52
MTHFR-201ENST00000376486 RB1CC1Q8TDY2 1594 aa41.25■■■■■ 4.19
MTHFR-201ENST00000376486 NACADO15069 1562 aa40.95■■■■■ 4.15
MTHFR-201ENST00000376486 DCAF8L2P0C7V8 631 aa40.76■■■■■ 4.12
MTHFR-201ENST00000376486 DNAJC5BQ9UF47 199 aa40.46■■■■■ 4.07
MTHFR-201ENST00000376486 MYO15BQ96JP2 1530 aa40.36■■■■■ 4.05
MTHFR-201ENST00000376486 UNC13AQ9UPW8 1703 aa40.3■■■■■ 4.04
MTHFR-201ENST00000376486 PABPN1Q86U42 306 aaKnown RBP eCLIP40.28■■■■■ 4.04
MTHFR-201ENST00000376486 ZCCHC6Q5VYS8 1495 aaKnown RBP40.03■■■■■ 4
MTHFR-201ENST00000376486 BICRAQ9NZM4 1560 aa39.98■■■■□ 3.99
MTHFR-201ENST00000376486 DCAF1Q9Y4B6 1507 aa39.86■■■■□ 3.97
MTHFR-201ENST00000376486 SCRIBQ14160 1630 aa39.53■■■■□ 3.92
MTHFR-201ENST00000376486 SHROOM4Q9ULL8 1493 aa39.49■■■■□ 3.91
MTHFR-201ENST00000376486 CC2D2AQ9P2K1 1620 aa39.11■■■■□ 3.85
MTHFR-201ENST00000376486 EIF4G1Q04637 1599 aaKnown RBP39.04■■■■□ 3.84
MTHFR-201ENST00000376486 CECR2Q9BXF3 1484 aa38.99■■■■□ 3.83
MTHFR-201ENST00000376486 NCAPD3P42695 1498 aa37.76■■■■□ 3.63
MTHFR-201ENST00000376486 SMARCA4P51532 1647 aa37.69■■■■□ 3.62
MTHFR-201ENST00000376486 ATAD2BQ9ULI0 1458 aa37.67■■■■□ 3.62
MTHFR-201ENST00000376486 SMARCA2P51531 1590 aa37.61■■■■□ 3.61
MTHFR-201ENST00000376486 HMGXB3Q12766 1538 aa37.54■■■■□ 3.6
MTHFR-201ENST00000376486 BAZ1AQ9NRL2 1556 aaPredicted RBP37.51■■■■□ 3.59
MTHFR-201ENST00000376486 ERCC6Q03468 1493 aa37.43■■■■□ 3.58
MTHFR-201ENST00000376486 BAZ1BQ9UIG0 1483 aaKnown RBP37.36■■■■□ 3.57
MTHFR-201ENST00000376486 CUX2O14529 1486 aa37.3■■■■□ 3.56
MTHFR-201ENST00000376486 PEG3Q9GZU2 1588 aa37.28■■■■□ 3.56
MTHFR-201ENST00000376486 MROH2BQ7Z745 1585 aa37.2■■■■□ 3.55
MTHFR-201ENST00000376486 NESP48681 1621 aa37.18■■■■□ 3.54
MTHFR-201ENST00000376486 DNAJC5Q9H3Z4 198 aa37.15■■■■□ 3.54
MTHFR-201ENST00000376486 LAMC3Q9Y6N6 1575 aa36.96■■■■□ 3.51
MTHFR-201ENST00000376486 THOC2Q8NI27 1593 aaKnown RBP36.83■■■■□ 3.49
MTHFR-201ENST00000376486 WIZO95785 1651 aa36.78■■■■□ 3.48
MTHFR-201ENST00000376486 KIF21AQ7Z4S6 1674 aa36.75■■■■□ 3.47
MTHFR-201ENST00000376486 PDS5BQ9NTI5 1447 aa36.73■■■■□ 3.47
MTHFR-201ENST00000376486 CADPSQ9ULU8 1353 aa36.62■■■■□ 3.45
MTHFR-201ENST00000376486 MRC2Q9UBG0 1479 aa36.43■■■■□ 3.42
MTHFR-201ENST00000376486 RSF1Q96T23 1441 aaPredicted RBP36.42■■■■□ 3.42
MTHFR-201ENST00000376486 WDR62O43379 1518 aa36.34■■■■□ 3.41
MTHFR-201ENST00000376486 TOP2AP11388 1531 aaKnown RBP36.33■■■■□ 3.41
MTHFR-201ENST00000376486 CEP164Q9UPV0 1460 aa36.31■■■■□ 3.4
MTHFR-201ENST00000376486 FANCD2Q9BXW9 1451 aa36.25■■■■□ 3.39
MTHFR-201ENST00000376486 CFTRP13569 1480 aa36.22■■■■□ 3.39
MTHFR-201ENST00000376486 PRDM2Q13029 1718 aa35.94■■■■□ 3.34
MTHFR-201ENST00000376486 URB2Q14146 1524 aaKnown RBP35.93■■■■□ 3.34
MTHFR-201ENST00000376486 CCDC88BA6NC98 1476 aa35.87■■■■□ 3.33
MTHFR-201ENST00000376486 TRIM41Q8WV44 630 aa35.64■■■■□ 3.3
MTHFR-201ENST00000376486 OSCARQ8IYS5 282 aa35.56■■■■□ 3.28
MTHFR-201ENST00000376486 TOPBP1Q92547 1522 aa35.56■■■■□ 3.28
MTHFR-201ENST00000376486 IFT140Q96RY7 1462 aa35.55■■■■□ 3.28
MTHFR-201ENST00000376486 ABCC8Q09428 1581 aa35.49■■■■□ 3.27
MTHFR-201ENST00000376486 ZNF608Q9ULD9 1512 aaPredicted RBP35.47■■■■□ 3.27
MTHFR-201ENST00000376486 DNMBPQ6XZF7 1577 aa35.46■■■■□ 3.27
MTHFR-201ENST00000376486 EIF4G3O43432 1585 aaKnown RBP35.34■■■■□ 3.25
MTHFR-201ENST00000376486 TARBP1Q13395 1621 aaKnown RBP35.24■■■■□ 3.23
MTHFR-201ENST00000376486 POLA1P09884 1462 aaPredicted RBP35.2■■■■□ 3.23
MTHFR-201ENST00000376486 AQRO60306 1485 aaKnown RBP eCLIP35.16■■■■□ 3.221e-6■□□□□ 11.2
MTHFR-201ENST00000376486 RIMBP3CA6NJZ7 1639 aa35.14■■■■□ 3.22
MTHFR-201ENST00000376486 RIMBP3BA6NNM3 1639 aa35.14■■■■□ 3.22
MTHFR-201ENST00000376486 RIMBP3Q9UFD9 1639 aa35.14■■■■□ 3.22
MTHFR-201ENST00000376486 CHD1O14646 1710 aa35.07■■■■□ 3.2
MTHFR-201ENST00000376486 RAD54L2Q9Y4B4 1467 aa35.06■■■■□ 3.2
MTHFR-201ENST00000376486 ARHGEF11O15085 1522 aa35.04■■■■□ 3.2
MTHFR-201ENST00000376486 SOGA1O94964 1423 aa35.03■■■■□ 3.2
MTHFR-201ENST00000376486 FGD5Q6ZNL6 1462 aa35.01■■■■□ 3.19
MTHFR-201ENST00000376486 CUX1P39880 1505 aa34.96■■■■□ 3.19
MTHFR-201ENST00000376486 FBLN2P98095 1184 aa34.96■■■■□ 3.19
MTHFR-201ENST00000376486 TDRD9Q8NDG6 1382 aaKnown RBP34.95■■■■□ 3.19
MTHFR-201ENST00000376486 WDR97A6NE52 1622 aa34.91■■■■□ 3.18
MTHFR-201ENST00000376486 SUPT5HO00267 1087 aaKnown RBP34.88■■■■□ 3.17
MTHFR-201ENST00000376486 SNAPC4Q5SXM2 1469 aa34.84■■■■□ 3.17
MTHFR-201ENST00000376486 MAGI1Q96QZ7 1491 aaPredicted RBP34.75■■■■□ 3.15
MTHFR-201ENST00000376486 GRIN2BQ13224 1484 aa34.74■■■■□ 3.15
MTHFR-201ENST00000376486 CYB5RLQ6IPT4 315 aa34.74■■■■□ 3.15
MTHFR-201ENST00000376486 CHMP7Q8WUX9 453 aaPredicted RBP34.68■■■■□ 3.14
MTHFR-201ENST00000376486 ARAP1Q96P48 1450 aa34.68■■■■□ 3.14
MTHFR-201ENST00000376486 PBRM1Q86U86 1689 aa34.66■■■■□ 3.14
MTHFR-201ENST00000376486 SYNJ1O43426 1573 aa34.66■■■■□ 3.14
MTHFR-201ENST00000376486 CLASP1Q7Z460 1538 aa34.63■■■■□ 3.13
MTHFR-201ENST00000376486 GAPVD1Q14C86 1478 aa34.63■■■■□ 3.13
MTHFR-201ENST00000376486 SYNJ2O15056 1496 aa34.62■■■■□ 3.13
MTHFR-201ENST00000376486 ABCA10Q8WWZ4 1543 aa34.58■■■■□ 3.13
MTHFR-201ENST00000376486 ABCA5Q8WWZ7 1642 aa34.55■■■■□ 3.12
MTHFR-201ENST00000376486 WRNQ14191 1432 aaPredicted RBP eCLIP34.47■■■■□ 3.11
MTHFR-201ENST00000376486 BIVM-ERCC5R4GMW8 1640 aa34.44■■■■□ 3.1
MTHFR-201ENST00000376486 TOP2BQ02880 1626 aa34.42■■■■□ 3.1
MTHFR-201ENST00000376486 TRHP20396 242 aaPredicted RBP34.4■■■■□ 3.1
MTHFR-201ENST00000376486 ADAMTS12P58397 1594 aa34.32■■■■□ 3.08
MTHFR-201ENST00000376486 GRIN2AQ12879 1464 aa34.3■■■■□ 3.08
MTHFR-201ENST00000376486 FHAD1B1AJZ9 1412 aa34.18■■■■□ 3.06
MTHFR-201ENST00000376486 CEP170Q5SW79 1584 aa34.18■■■■□ 3.06
MTHFR-201ENST00000376486 ERICH3Q5RHP9 1530 aa34.17■■■■□ 3.06
MTHFR-201ENST00000376486 NUP160Q12769 1436 aa34.15■■■■□ 3.06
MTHFR-201ENST00000376486 ERCC6L2Q5T890 1561 aa34.09■■■■□ 3.05
MTHFR-201ENST00000376486 SHROOM2Q13796 1616 aa34.02■■■■□ 3.04
MTHFR-201ENST00000376486 PRG4Q92954 1404 aaPredicted RBP33.84■■■■□ 3.01
MTHFR-201ENST00000376486 RUSC2Q8N2Y8 1516 aa33.84■■■■□ 3.01
MTHFR-201ENST00000376486 JPH4Q96JJ6 628 aa33.77■■■■□ 3
MTHFR-201ENST00000376486 KIF27Q86VH2 1401 aa33.76■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms