RNA–Protein interactions for RNA: ENST00000375641.6

C6orf48-206, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-206ENST00000375641 TROQ12816 1431 aaPredicted RBP30.65■■■□□ 2.5
C6orf48-206ENST00000375641 POGZQ7Z3K3 1410 aa30.65■■■□□ 2.5
C6orf48-206ENST00000375641 KIF14Q15058 1648 aa30.61■■■□□ 2.49
C6orf48-206ENST00000375641 CLIP1P30622 1438 aa30.59■■■□□ 2.49
C6orf48-206ENST00000375641 MYO5CQ9NQX4 1742 aa30.58■■■□□ 2.49
C6orf48-206ENST00000375641 MLECQ14165 292 aa30.57■■■□□ 2.48
C6orf48-206ENST00000375641 RIMS1Q86UR5 1692 aaKnown RBP30.56■■■□□ 2.48
C6orf48-206ENST00000375641 SIGLEC1Q9BZZ2 1709 aa30.56■■■□□ 2.48
C6orf48-206ENST00000375641 CASKIN1Q8WXD9 1431 aa30.55■■■□□ 2.48
C6orf48-206ENST00000375641 LRRIQ1Q96JM4 1722 aa30.54■■■□□ 2.48
C6orf48-206ENST00000375641 ATP10AO60312 1499 aa30.53■■■□□ 2.48
C6orf48-206ENST00000375641 PLPPR3Q6T4P5 718 aa30.53■■■□□ 2.48
C6orf48-206ENST00000375641 ARHGAP5Q13017 1502 aa30.52■■■□□ 2.48
C6orf48-206ENST00000375641 AFAP1Q8N556 730 aa30.52■■■□□ 2.48
C6orf48-206ENST00000375641 PCF11O94913 1555 aaKnown RBP30.52■■■□□ 2.48
C6orf48-206ENST00000375641 LMTK3Q96Q04 1460 aa30.5■■■□□ 2.47
C6orf48-206ENST00000375641 CCDC18Q5T9S5 1454 aa30.48■■■□□ 2.47
C6orf48-206ENST00000375641 ZNF518AQ6AHZ1 1483 aa30.48■■■□□ 2.47
C6orf48-206ENST00000375641 C9orf84Q5VXU9 1444 aa30.47■■■□□ 2.47
C6orf48-206ENST00000375641 MYT1LQ9UL68 1186 aa30.43■■■□□ 2.46
C6orf48-206ENST00000375641 HSPA2P54652 639 aa30.41■■■□□ 2.46
C6orf48-206ENST00000375641 KDM5CP41229 1560 aa30.41■■■□□ 2.46
C6orf48-206ENST00000375641 CDC42BPBQ9Y5S2 1711 aa30.39■■■□□ 2.46
C6orf48-206ENST00000375641 ARHGEF12Q9NZN5 1544 aa30.39■■■□□ 2.46
C6orf48-206ENST00000375641 FYCO1Q9BQS8 1478 aa30.38■■■□□ 2.45
C6orf48-206ENST00000375641 FER1L4A9Z1Z3 1794 aa30.36■■■□□ 2.45
C6orf48-206ENST00000375641 TRAPPC8Q9Y2L5 1435 aa30.35■■■□□ 2.45
C6orf48-206ENST00000375641 PREX2Q70Z35 1606 aa30.34■■■□□ 2.45
C6orf48-206ENST00000375641 MLH3Q9UHC1 1453 aa30.34■■■□□ 2.45
C6orf48-206ENST00000375641 FBXO41Q8TF61 875 aa30.34■■■□□ 2.45
C6orf48-206ENST00000375641 CEBPAP49715 358 aaPredicted RBP30.32■■■□□ 2.44
C6orf48-206ENST00000375641 ABCC1P33527 1531 aa30.31■■■□□ 2.44
C6orf48-206ENST00000375641 DIP2CQ9Y2E4 1556 aa30.3■■■□□ 2.44
C6orf48-206ENST00000375641 ZNF777Q9ULD5 760 aaPredicted RBP30.27■■■□□ 2.44
C6orf48-206ENST00000375641 REREQ9P2R6 1566 aa30.26■■■□□ 2.43
C6orf48-206ENST00000375641 CDC42BPAQ5VT25 1732 aa30.25■■■□□ 2.43
C6orf48-206ENST00000375641 ABCA6Q8N139 1617 aa30.24■■■□□ 2.43
C6orf48-206ENST00000375641 GPATCH8Q9UKJ3 1502 aaKnown RBP30.23■■■□□ 2.43
C6orf48-206ENST00000375641 ITSN2Q9NZM3 1697 aa30.23■■■□□ 2.43
C6orf48-206ENST00000375641 AGLP35573 1532 aa30.2■■■□□ 2.42
C6orf48-206ENST00000375641 HNRNPMP52272 730 aaKnown RBP eCLIP30.19■■■□□ 2.42
C6orf48-206ENST00000375641 KIDINS220Q9ULH0 1771 aa30.16■■■□□ 2.42
C6orf48-206ENST00000375641 ESF1Q9H501 851 aaKnown RBP30.16■■■□□ 2.42
C6orf48-206ENST00000375641 CFDP1Q9UEE9 299 aaPredicted RBP30.16■■■□□ 2.42
C6orf48-206ENST00000375641 SAMD9LQ8IVG5 1584 aa30.15■■■□□ 2.42
C6orf48-206ENST00000375641 SPAG9O60271 1321 aaKnown RBP30.15■■■□□ 2.42
C6orf48-206ENST00000375641 MTUS2Q5JR59 1369 aa30.14■■■□□ 2.41
C6orf48-206ENST00000375641 CCNB3Q8WWL7 1395 aa30.14■■■□□ 2.41
C6orf48-206ENST00000375641 PREX1Q8TCU6 1659 aa30.13■■■□□ 2.41
C6orf48-206ENST00000375641 SYCP2Q9BX26 1530 aa30.12■■■□□ 2.41
C6orf48-206ENST00000375641 KIAA1107Q9UPP5 1409 aa30.11■■■□□ 2.41
C6orf48-206ENST00000375641 UHRF1BP1Q6BDS2 1440 aa30.1■■■□□ 2.41
C6orf48-206ENST00000375641 PLEKHH2Q8IVE3 1493 aa30.07■■■□□ 2.4
C6orf48-206ENST00000375641 SETD1BQ9UPS6 1966 aaKnown RBP30.07■■■□□ 2.4
C6orf48-206ENST00000375641 CERKQ8TCT0 537 aa30.05■■■□□ 2.4
C6orf48-206ENST00000375641 C3P01024 1663 aa30.04■■■□□ 2.4
C6orf48-206ENST00000375641 CNTLNQ9NXG0 1405 aa30.04■■■□□ 2.4
C6orf48-206ENST00000375641 DMRT2Q9Y5R5 561 aa30.03■■■□□ 2.4
C6orf48-206ENST00000375641 CEP162Q5TB80 1403 aa30.03■■■□□ 2.4
C6orf48-206ENST00000375641 ZNF644Q9H582 1327 aaPredicted RBP30■■■□□ 2.39
C6orf48-206ENST00000375641 ATP7AQ04656 1500 aa29.99■■■□□ 2.39
C6orf48-206ENST00000375641 EHBP1L1Q8N3D4 1523 aa29.96■■■□□ 2.39
C6orf48-206ENST00000375641 STRCQ7RTU9 1775 aa29.96■■■□□ 2.39
C6orf48-206ENST00000375641 A2MP01023 1474 aa29.96■■■□□ 2.39
C6orf48-206ENST00000375641 TIAM1Q13009 1591 aa29.95■■■□□ 2.39
C6orf48-206ENST00000375641 ZMYM3Q14202 1370 aa29.95■■■□□ 2.39
C6orf48-206ENST00000375641 INO80Q9ULG1 1556 aaPredicted RBP29.94■■■□□ 2.38
C6orf48-206ENST00000375641 SUPT6HQ7KZ85 1726 aaKnown RBP29.93■■■□□ 2.38
C6orf48-206ENST00000375641 MBD5Q9P267 1494 aa29.93■■■□□ 2.38
C6orf48-206ENST00000375641 GGT6Q6P531 493 aa29.91■■■□□ 2.38
C6orf48-206ENST00000375641 PLXNC1O60486 1568 aa29.9■■■□□ 2.38
C6orf48-206ENST00000375641 NPATQ14207 1427 aa29.89■■■□□ 2.38
C6orf48-206ENST00000375641 PTPRTO14522 1441 aa29.88■■■□□ 2.37
C6orf48-206ENST00000375641 MROH2AA6NES4 1674 aa29.87■■■□□ 2.37
C6orf48-206ENST00000375641 PPP6R1Q9UPN7 881 aa29.85■■■□□ 2.37
C6orf48-206ENST00000375641 LOC105371045A0A1W2PR82 267 aa29.84■■■□□ 2.37
C6orf48-206ENST00000375641 RTEL1-TNFRSF6BF6WH68 1400 aa29.84■■■□□ 2.37
C6orf48-206ENST00000375641 NCOA2Q15596 1464 aa29.82■■■□□ 2.36
C6orf48-206ENST00000375641 NCOA1Q15788 1441 aa29.81■■■□□ 2.36
C6orf48-206ENST00000375641 DHX29Q7Z478 1369 aaKnown RBP29.8■■■□□ 2.36
C6orf48-206ENST00000375641 CLTCQ00610 1675 aaKnown RBP29.8■■■□□ 2.36
C6orf48-206ENST00000375641 ADGBQ8N7X0 1667 aa29.79■■■□□ 2.36
C6orf48-206ENST00000375641 RSPH4AQ5TD94 716 aa29.79■■■□□ 2.36
C6orf48-206ENST00000375641 PTPRKQ15262 1439 aa29.78■■■□□ 2.36
C6orf48-206ENST00000375641 CAMSAP1Q5T5Y3 1602 aa29.74■■■□□ 2.35
C6orf48-206ENST00000375641 CAMSAP2Q08AD1 1489 aa29.74■■■□□ 2.35
C6orf48-206ENST00000375641 CCDC141Q6ZP82 1450 aa29.74■■■□□ 2.35
C6orf48-206ENST00000375641 NCKAP5LQ9HCH0 1330 aa29.72■■■□□ 2.35
C6orf48-206ENST00000375641 VPS8Q8N3P4 1428 aa29.72■■■□□ 2.35
C6orf48-206ENST00000375641 KIF3BO15066 747 aa29.72■■■□□ 2.35
C6orf48-206ENST00000375641 LRRC9Q6ZRR7 1453 aa29.68■■■□□ 2.34
C6orf48-206ENST00000375641 TSPY4P0CV99 314 aa29.67■■■□□ 2.34
C6orf48-206ENST00000375641 TSPY10P0CW01 314 aa29.67■■■□□ 2.34
C6orf48-206ENST00000375641 PKD2Q13563 968 aa29.66■■■□□ 2.34
C6orf48-206ENST00000375641 LTBP4Q8N2S1 1624 aa29.66■■■□□ 2.34
C6orf48-206ENST00000375641 MYO3AQ8NEV4 1616 aa29.65■■■□□ 2.34
C6orf48-206ENST00000375641 KANK4Q5T7N3 995 aaPredicted RBP29.64■■■□□ 2.34
C6orf48-206ENST00000375641 CEP170BQ9Y4F5 1589 aaPredicted RBP29.63■■■□□ 2.33
C6orf48-206ENST00000375641 PLA2R1Q13018 1463 aa29.62■■■□□ 2.33
C6orf48-206ENST00000375641 ARHGEF5Q12774 1597 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms