RNA–Protein interactions for RNA: ENST00000374919.5

SPIN3-201, Transcript of spindlin family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPIN3, Length 4,642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-201ENST00000374919 LAMC3Q9Y6N6 1575 aa17.11■□□□□ 0.33
SPIN3-201ENST00000374919 TMF1P82094 1093 aa17.09■□□□□ 0.33
SPIN3-201ENST00000374919 CUX1P39880 1505 aa17.08■□□□□ 0.32
SPIN3-201ENST00000374919 RAB3GAP2Q9H2M9 1393 aa17.07■□□□□ 0.32
SPIN3-201ENST00000374919 SYNJ1O43426 1573 aa17.06■□□□□ 0.32
SPIN3-201ENST00000374919 DNMBPQ6XZF7 1577 aa17.05■□□□□ 0.32
SPIN3-201ENST00000374919 ZNF644Q9H582 1327 aaPredicted RBP17.05■□□□□ 0.32
SPIN3-201ENST00000374919 AFAP1Q8N556 730 aa17.04■□□□□ 0.32
SPIN3-201ENST00000374919 ARXQ96QS3 562 aa17.04■□□□□ 0.32
SPIN3-201ENST00000374919 PAK3O75914 559 aaPredicted RBP17.03■□□□□ 0.32
SPIN3-201ENST00000374919 TIMELESSQ9UNS1 1208 aa17.03■□□□□ 0.32
SPIN3-201ENST00000374919 NUDCQ9Y266 331 aa17.02■□□□□ 0.32
SPIN3-201ENST00000374919 SENP3-EIF4A1A0A087X0R7 540 aa17■□□□□ 0.31
SPIN3-201ENST00000374919 SYNJ2O15056 1496 aa17■□□□□ 0.31
SPIN3-201ENST00000374919 NEUROD2Q15784 382 aa17■□□□□ 0.31
SPIN3-201ENST00000374919 CC2D1BQ5T0F9 858 aaKnown RBP16.99■□□□□ 0.31
SPIN3-201ENST00000374919 PRDM2Q13029 1718 aa16.99■□□□□ 0.31
SPIN3-201ENST00000374919 NUTM2FA1L443 756 aa16.98■□□□□ 0.31
SPIN3-201ENST00000374919 U2SURPO15042 1029 aaKnown RBP16.98■□□□□ 0.31
SPIN3-201ENST00000374919 HDGFL2Q7Z4V5 671 aaPredicted RBP16.97■□□□□ 0.31
SPIN3-201ENST00000374919 MAPK8IP3Q9UPT6 1336 aa16.96■□□□□ 0.31
SPIN3-201ENST00000374919 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.95■□□□□ 0.3
SPIN3-201ENST00000374919 TOP2BQ02880 1626 aa16.95■□□□□ 0.3
SPIN3-201ENST00000374919 UNC13AQ9UPW8 1703 aa16.95■□□□□ 0.3
SPIN3-201ENST00000374919 L3MBTL2Q969R5 705 aa16.95■□□□□ 0.3
SPIN3-201ENST00000374919 MIER1Q8N108 512 aa16.94■□□□□ 0.3
SPIN3-201ENST00000374919 MYOM3Q5VTT5 1437 aa16.94■□□□□ 0.3
SPIN3-201ENST00000374919 ROCK2O75116 1388 aaKnown RBP16.94■□□□□ 0.3
SPIN3-201ENST00000374919 VGFO15240 615 aaPredicted RBP16.93■□□□□ 0.3
SPIN3-201ENST00000374919 TRAK1Q9UPV9 953 aa16.93■□□□□ 0.3
SPIN3-201ENST00000374919 NGDNQ8NEJ9 315 aaKnown RBP16.92■□□□□ 0.3
SPIN3-201ENST00000374919 MORC1Q86VD1 984 aa16.92■□□□□ 0.3
SPIN3-201ENST00000374919 ABCA10Q8WWZ4 1543 aa16.91■□□□□ 0.3
SPIN3-201ENST00000374919 RAPGEF3O95398 923 aa16.91■□□□□ 0.3
SPIN3-201ENST00000374919 LAS1LQ9Y4W2 734 aaKnown RBP16.91■□□□□ 0.3
SPIN3-201ENST00000374919 HSPA5P11021 654 aaKnown RBP16.9■□□□□ 0.3
SPIN3-201ENST00000374919 KIAA0586Q9BVV6 1533 aa16.9■□□□□ 0.3
SPIN3-201ENST00000374919 KIF15Q9NS87 1388 aa16.89■□□□□ 0.3
SPIN3-201ENST00000374919 URB2Q14146 1524 aaKnown RBP16.89■□□□□ 0.29
SPIN3-201ENST00000374919 CCDC144AA2RUR9 1427 aa16.89■□□□□ 0.29
SPIN3-201ENST00000374919 CSB-PGBD3P0DP91 1061 aa16.89■□□□□ 0.29
SPIN3-201ENST00000374919 ZNF608Q9ULD9 1512 aaPredicted RBP16.89■□□□□ 0.29
SPIN3-201ENST00000374919 CASKIN1Q8WXD9 1431 aa16.88■□□□□ 0.29
SPIN3-201ENST00000374919 PRXQ9BXM0 1461 aa16.88■□□□□ 0.29
SPIN3-201ENST00000374919 CCDC9Q9Y3X0 531 aaKnown RBP16.87■□□□□ 0.29
SPIN3-201ENST00000374919 ARHGAP5Q13017 1502 aa16.85■□□□□ 0.29
SPIN3-201ENST00000374919 PEG3Q9GZU2 1588 aa16.85■□□□□ 0.29
SPIN3-201ENST00000374919 ERICH3Q5RHP9 1530 aa16.84■□□□□ 0.29
SPIN3-201ENST00000374919 UACAQ9BZF9 1416 aa16.84■□□□□ 0.29
SPIN3-201ENST00000374919 FKBP8Q14318 412 aa16.84■□□□□ 0.29
SPIN3-201ENST00000374919 TERF2IPQ9NYB0 399 aa16.83■□□□□ 0.28
SPIN3-201ENST00000374919 FGD6Q6ZV73 1430 aa16.83■□□□□ 0.28
SPIN3-201ENST00000374919 MAGI1Q96QZ7 1491 aaPredicted RBP16.83■□□□□ 0.28
SPIN3-201ENST00000374919 NPHP1O15259 732 aa16.82■□□□□ 0.28
SPIN3-201ENST00000374919 KIF21BO75037 1637 aa16.82■□□□□ 0.28
SPIN3-201ENST00000374919 ARAP1Q96P48 1450 aa16.82■□□□□ 0.28
SPIN3-201ENST00000374919 EIF3AQ14152 1382 aaKnown RBP16.82■□□□□ 0.28
SPIN3-201ENST00000374919 SCAPERQ9BY12 1400 aa16.81■□□□□ 0.28
SPIN3-201ENST00000374919 PHLDB1Q86UU1 1377 aa16.81■□□□□ 0.28
SPIN3-201ENST00000374919 PNNQ9H307 717 aaKnown RBP16.8■□□□□ 0.28
SPIN3-201ENST00000374919 MYH16Q9H6N6 1097 aa16.8■□□□□ 0.28
SPIN3-201ENST00000374919 GRIN2AQ12879 1464 aa16.8■□□□□ 0.28
SPIN3-201ENST00000374919 NCOA2Q15596 1464 aa16.79■□□□□ 0.28
SPIN3-201ENST00000374919 LRRC9Q6ZRR7 1453 aa16.78■□□□□ 0.28
SPIN3-201ENST00000374919 TROQ12816 1431 aaPredicted RBP16.78■□□□□ 0.28
SPIN3-201ENST00000374919 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.78■□□□□ 0.28
SPIN3-201ENST00000374919 ANKRD50Q9ULJ7 1429 aa16.77■□□□□ 0.28
SPIN3-201ENST00000374919 CCDC136Q96JN2 1154 aa16.77■□□□□ 0.27
SPIN3-201ENST00000374919 MINK1Q8N4C8 1332 aaPredicted RBP16.75■□□□□ 0.27
SPIN3-201ENST00000374919 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.75■□□□□ 0.27
SPIN3-201ENST00000374919 FYCO1Q9BQS8 1478 aa16.75■□□□□ 0.27
SPIN3-201ENST00000374919 EFCAB5A4FU69 1503 aa16.74■□□□□ 0.27
SPIN3-201ENST00000374919 RTF1Q92541 710 aaKnown RBP16.73■□□□□ 0.27
SPIN3-201ENST00000374919 ST20-MTHFSA0A0A6YYL1 179 aa16.73■□□□□ 0.27
SPIN3-201ENST00000374919 TXNDC2Q86VQ3 553 aa16.73■□□□□ 0.27
SPIN3-201ENST00000374919 U2AF1L5P0DN76 240 aaPredicted RBP16.73■□□□□ 0.27
SPIN3-201ENST00000374919 U2AF1Q01081 240 aaKnown RBP eCLIP16.73■□□□□ 0.27
SPIN3-201ENST00000374919 AMPHP49418 695 aa16.72■□□□□ 0.27
SPIN3-201ENST00000374919 LTV1Q96GA3 475 aaPredicted RBP16.72■□□□□ 0.27
SPIN3-201ENST00000374919 CD109Q6YHK3 1445 aa16.71■□□□□ 0.27
SPIN3-201ENST00000374919 IRX6P78412 446 aaPredicted RBP16.71■□□□□ 0.27
SPIN3-201ENST00000374919 IQGAP2Q13576 1575 aa16.71■□□□□ 0.26
SPIN3-201ENST00000374919 PLB1Q6P1J6 1458 aa16.69■□□□□ 0.26
SPIN3-201ENST00000374919 THEMISQ8N1K5 641 aaPredicted RBP16.69■□□□□ 0.26
SPIN3-201ENST00000374919 KTN1Q86UP2 1357 aaKnown RBP16.68■□□□□ 0.26
SPIN3-201ENST00000374919 ATF3P18847 181 aa16.68■□□□□ 0.26
SPIN3-201ENST00000374919 FTSJ3Q8IY81 847 aaKnown RBP16.68■□□□□ 0.26
SPIN3-201ENST00000374919 RTL5Q5HYW3 569 aaPredicted RBP16.67■□□□□ 0.26
SPIN3-201ENST00000374919 UPF2Q9HAU5 1272 aaKnown RBP16.67■□□□□ 0.26
SPIN3-201ENST00000374919 EVC2Q86UK5 1308 aa16.67■□□□□ 0.26
SPIN3-201ENST00000374919 PLEKHH2Q8IVE3 1493 aa16.66■□□□□ 0.26
SPIN3-201ENST00000374919 FRAT1Q92837 279 aaPredicted RBP16.66■□□□□ 0.26
SPIN3-201ENST00000374919 POGZQ7Z3K3 1410 aa16.65■□□□□ 0.26
SPIN3-201ENST00000374919 PSME1Q06323 249 aa16.65■□□□□ 0.26
SPIN3-201ENST00000374919 TMEM132EQ6IEE7 984 aa16.64■□□□□ 0.25
SPIN3-201ENST00000374919 ZNF330Q9Y3S2 320 aaPredicted RBP16.64■□□□□ 0.25
SPIN3-201ENST00000374919 HSP90AA1P07900 732 aaKnown RBP16.63■□□□□ 0.25
SPIN3-201ENST00000374919 PROSER2Q86WR7 435 aaPredicted RBP16.63■□□□□ 0.25
SPIN3-201ENST00000374919 DHX57Q6P158 1386 aaKnown RBP16.63■□□□□ 0.25
SPIN3-201ENST00000374919 C9orf84Q5VXU9 1444 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms