RNA–Protein interactions for RNA: ENST00000374919.5

SPIN3-201, Transcript of spindlin family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPIN3, Length 4,642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-201ENST00000374919 DCAF8L2P0C7V8 631 aa23.78■■□□□ 1.4
SPIN3-201ENST00000374919 NISCHQ9Y2I1 1504 aa23.68■■□□□ 1.38
SPIN3-201ENST00000374919 SHROOM4Q9ULL8 1493 aa21.95■■□□□ 1.1
SPIN3-201ENST00000374919 SUPT5HO00267 1087 aaKnown RBP21.93■■□□□ 1.1
SPIN3-201ENST00000374919 EHMT2Q96KQ7 1210 aa20.98■□□□□ 0.95
SPIN3-201ENST00000374919 ABCC9O60706 1549 aa20.85■□□□□ 0.93
SPIN3-201ENST00000374919 FAM9AQ8IZU1 332 aaPredicted RBP20.63■□□□□ 0.89
SPIN3-201ENST00000374919 PABPN1Q86U42 306 aaKnown RBP eCLIP20.5■□□□□ 0.87
SPIN3-201ENST00000374919 APLP2Q06481 763 aa20.42■□□□□ 0.86
SPIN3-201ENST00000374919 TRIM41Q8WV44 630 aa20.37■□□□□ 0.85
SPIN3-201ENST00000374919 RANGAP1P46060 587 aaPredicted RBP20.34■□□□□ 0.85
SPIN3-201ENST00000374919 ATP1B4Q9UN42 357 aaPredicted RBP20.14■□□□□ 0.81
SPIN3-201ENST00000374919 UBTFP17480 764 aaKnown RBP20.09■□□□□ 0.81
SPIN3-201ENST00000374919 TTBK1Q5TCY1 1321 aaPredicted RBP20.09■□□□□ 0.81
SPIN3-201ENST00000374919 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.68■□□□□ 0.74
SPIN3-201ENST00000374919 HNRNPUL2Q1KMD3 747 aaKnown RBP19.68■□□□□ 0.74
SPIN3-201ENST00000374919 CCDC180Q9P1Z9 1646 aa19.65■□□□□ 0.74
SPIN3-201ENST00000374919 SCRIBQ14160 1630 aa19.61■□□□□ 0.73
SPIN3-201ENST00000374919 ZCCHC6Q5VYS8 1495 aaKnown RBP19.52■□□□□ 0.72
SPIN3-201ENST00000374919 PCGF6Q9BYE7 350 aa19.51■□□□□ 0.71
SPIN3-201ENST00000374919 MYT1LQ9UL68 1186 aa19.5■□□□□ 0.71
SPIN3-201ENST00000374919 CHIC1Q5VXU3 224 aa19.5■□□□□ 0.71
SPIN3-201ENST00000374919 FBLN2P98095 1184 aa19.49■□□□□ 0.71
SPIN3-201ENST00000374919 PPARGC1BQ86YN6 1023 aaKnown RBP19.45■□□□□ 0.7
SPIN3-201ENST00000374919 RB1CC1Q8TDY2 1594 aa19.4■□□□□ 0.7
SPIN3-201ENST00000374919 LOC105371045A0A1W2PR82 267 aa19.36■□□□□ 0.69
SPIN3-201ENST00000374919 ITGAEP38570 1179 aa19.26■□□□□ 0.67
SPIN3-201ENST00000374919 CCER1Q8TC90 406 aaPredicted RBP19.25■□□□□ 0.67
SPIN3-201ENST00000374919 NACADO15069 1562 aa19.2■□□□□ 0.66
SPIN3-201ENST00000374919 P3H3Q8IVL6 736 aa18.99■□□□□ 0.63
SPIN3-201ENST00000374919 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
SPIN3-201ENST00000374919 ARID3CA6NKF2 412 aa18.95■□□□□ 0.62
SPIN3-201ENST00000374919 PELP1Q8IZL8 1130 aaKnown RBP18.9■□□□□ 0.62
SPIN3-201ENST00000374919 FAM50AQ14320 339 aaKnown RBP18.89■□□□□ 0.61
SPIN3-201ENST00000374919 ZEB1P37275 1124 aaPredicted RBP18.88■□□□□ 0.61
SPIN3-201ENST00000374919 TRIM26Q12899 539 aaPredicted RBP18.88■□□□□ 0.61
SPIN3-201ENST00000374919 BAZ1BQ9UIG0 1483 aaKnown RBP18.8■□□□□ 0.6
SPIN3-201ENST00000374919 NPM1P06748 294 aaKnown RBP eCLIP18.79■□□□□ 0.6
SPIN3-201ENST00000374919 CHMP7Q8WUX9 453 aaPredicted RBP18.79■□□□□ 0.6
SPIN3-201ENST00000374919 RSF1Q96T23 1441 aaPredicted RBP18.76■□□□□ 0.59
SPIN3-201ENST00000374919 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
SPIN3-201ENST00000374919 POLR3GLQ9BT43 218 aa18.71■□□□□ 0.59
SPIN3-201ENST00000374919 TRIM52Q96A61 297 aa18.71■□□□□ 0.59
SPIN3-201ENST00000374919 CDK11AQ9UQ88 783 aaPredicted RBP18.7■□□□□ 0.58
SPIN3-201ENST00000374919 ERCC6Q03468 1493 aa18.68■□□□□ 0.58
SPIN3-201ENST00000374919 ZNF777Q9ULD5 760 aaPredicted RBP18.66■□□□□ 0.58
SPIN3-201ENST00000374919 CECR2Q9BXF3 1484 aa18.66■□□□□ 0.58
SPIN3-201ENST00000374919 BAZ1AQ9NRL2 1556 aaPredicted RBP18.6■□□□□ 0.57
SPIN3-201ENST00000374919 MYT1Q01538 1121 aa18.53■□□□□ 0.56
SPIN3-201ENST00000374919 SLC4A1APQ9BWU0 796 aaKnown RBP18.52■□□□□ 0.55
SPIN3-201ENST00000374919 CNGB1Q14028 1251 aaPredicted RBP18.5■□□□□ 0.55
SPIN3-201ENST00000374919 ESF1Q9H501 851 aaKnown RBP18.5■□□□□ 0.55
SPIN3-201ENST00000374919 WRNQ14191 1432 aaPredicted RBP eCLIP18.44■□□□□ 0.54
SPIN3-201ENST00000374919 NEUROD1Q13562 356 aa18.42■□□□□ 0.54
SPIN3-201ENST00000374919 PLPPR3Q6T4P5 718 aa18.42■□□□□ 0.54
SPIN3-201ENST00000374919 BCANQ96GW7 911 aa18.42■□□□□ 0.54
SPIN3-201ENST00000374919 HRCP23327 699 aa18.41■□□□□ 0.54
SPIN3-201ENST00000374919 ZNF326Q5BKZ1 582 aaKnown RBP18.4■□□□□ 0.54
SPIN3-201ENST00000374919 MYO15BQ96JP2 1530 aa18.39■□□□□ 0.53
SPIN3-201ENST00000374919 KCNH8Q96L42 1107 aa18.36■□□□□ 0.53
SPIN3-201ENST00000374919 MROH2BQ7Z745 1585 aa18.34■□□□□ 0.53
SPIN3-201ENST00000374919 PDS5BQ9NTI5 1447 aa18.32■□□□□ 0.52
SPIN3-201ENST00000374919 CENPBP07199 599 aaPredicted RBP18.32■□□□□ 0.52
SPIN3-201ENST00000374919 SMARCA2P51531 1590 aa18.31■□□□□ 0.52
SPIN3-201ENST00000374919 KIF27Q86VH2 1401 aa18.31■□□□□ 0.52
SPIN3-201ENST00000374919 YTHDC1Q96MU7 727 aaKnown RBP18.29■□□□□ 0.52
SPIN3-201ENST00000374919 PLEKHD1A6NEE1 506 aa18.26■□□□□ 0.51
SPIN3-201ENST00000374919 TSPY4P0CV99 314 aa18.25■□□□□ 0.51
SPIN3-201ENST00000374919 TSPY10P0CW01 314 aa18.25■□□□□ 0.51
SPIN3-201ENST00000374919 STAG3Q9UJ98 1225 aa18.25■□□□□ 0.51
SPIN3-201ENST00000374919 MTUS2Q5JR59 1369 aa18.25■□□□□ 0.51
SPIN3-201ENST00000374919 CHGAP10645 457 aaKnown RBP18.24■□□□□ 0.51
SPIN3-201ENST00000374919 CHIC2Q9UKJ5 165 aa18.22■□□□□ 0.51
SPIN3-201ENST00000374919 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.19■□□□□ 0.5
SPIN3-201ENST00000374919 EEA1Q15075 1411 aa18.18■□□□□ 0.5
SPIN3-201ENST00000374919 CLIP1P30622 1438 aa18.18■□□□□ 0.5
SPIN3-201ENST00000374919 CCDC88BA6NC98 1476 aa18.17■□□□□ 0.5
SPIN3-201ENST00000374919 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
SPIN3-201ENST00000374919 TRHP20396 242 aaPredicted RBP18.16■□□□□ 0.5
SPIN3-201ENST00000374919 CUX2O14529 1486 aa18.15■□□□□ 0.5
SPIN3-201ENST00000374919 ATAD2BQ9ULI0 1458 aa18.14■□□□□ 0.5
SPIN3-201ENST00000374919 NEFLP07196 543 aa18.14■□□□□ 0.49
SPIN3-201ENST00000374919 TDRD9Q8NDG6 1382 aaKnown RBP18.13■□□□□ 0.49
SPIN3-201ENST00000374919 CARMIL1Q5VZK9 1371 aa18.09■□□□□ 0.49
SPIN3-201ENST00000374919 SOGA1O94964 1423 aa18.08■□□□□ 0.48
SPIN3-201ENST00000374919 GOLGA3Q08378 1498 aa18.07■□□□□ 0.48
SPIN3-201ENST00000374919 ARID4BQ4LE39 1312 aaPredicted RBP18.04■□□□□ 0.48
SPIN3-201ENST00000374919 CFDP1Q9UEE9 299 aaPredicted RBP18.01■□□□□ 0.47
SPIN3-201ENST00000374919 WIZO95785 1651 aa18■□□□□ 0.47
SPIN3-201ENST00000374919 CEP164Q9UPV0 1460 aa17.98■□□□□ 0.47
SPIN3-201ENST00000374919 EIF4G1Q04637 1599 aaKnown RBP17.96■□□□□ 0.47
SPIN3-201ENST00000374919 RRP7BPQ9NSQ0 103 aa17.95■□□□□ 0.46
SPIN3-201ENST00000374919 TOP2AP11388 1531 aaKnown RBP17.95■□□□□ 0.46
SPIN3-201ENST00000374919 SMARCA4P51532 1647 aa17.94■□□□□ 0.46
SPIN3-201ENST00000374919 CEP162Q5TB80 1403 aa17.94■□□□□ 0.46
SPIN3-201ENST00000374919 TNIKQ9UKE5 1360 aa17.89■□□□□ 0.45
SPIN3-201ENST00000374919 ABCC8Q09428 1581 aa17.89■□□□□ 0.45
SPIN3-201ENST00000374919 FANCD2Q9BXW9 1451 aa17.87■□□□□ 0.45
SPIN3-201ENST00000374919 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
SPIN3-201ENST00000374919 TONSLQ96HA7 1378 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 562.6 ms