RNA–Protein interactions for RNA: ENST00000374595.8

CTNNAL1-204, Transcript of catenin alpha like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTNNAL1, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNAL1-204ENST00000374595 ABCC5O15440 1437 aa24.58■■□□□ 1.53
CTNNAL1-204ENST00000374595 CFDP1Q9UEE9 299 aaPredicted RBP24.58■■□□□ 1.52
CTNNAL1-204ENST00000374595 KDM5BQ9UGL1 1544 aa24.55■■□□□ 1.52
CTNNAL1-204ENST00000374595 KIF14Q15058 1648 aa24.53■■□□□ 1.52
CTNNAL1-204ENST00000374595 NUP160Q12769 1436 aa24.53■■□□□ 1.52
CTNNAL1-204ENST00000374595 TROQ12816 1431 aaPredicted RBP24.52■■□□□ 1.52
CTNNAL1-204ENST00000374595 CARMIL2Q6F5E8 1435 aa24.52■■□□□ 1.52
CTNNAL1-204ENST00000374595 AKNAQ7Z591 1439 aa24.5■■□□□ 1.51
CTNNAL1-204ENST00000374595 L3MBTL2Q969R5 705 aa24.5■■□□□ 1.51
CTNNAL1-204ENST00000374595 SLC4A1APQ9BWU0 796 aaKnown RBP24.49■■□□□ 1.51
CTNNAL1-204ENST00000374595 DNMT1P26358 1616 aaKnown RBP24.48■■□□□ 1.51
CTNNAL1-204ENST00000374595 CAMSAP2Q08AD1 1489 aa24.46■■□□□ 1.51
CTNNAL1-204ENST00000374595 GPATCH8Q9UKJ3 1502 aaKnown RBP24.46■■□□□ 1.51
CTNNAL1-204ENST00000374595 HSPA5P11021 654 aaKnown RBP24.44■■□□□ 1.5
CTNNAL1-204ENST00000374595 PLEKHD1A6NEE1 506 aa24.43■■□□□ 1.5
CTNNAL1-204ENST00000374595 ANP32CO43423 234 aa24.43■■□□□ 1.5
CTNNAL1-204ENST00000374595 ROCK1Q13464 1354 aa24.43■■□□□ 1.5
CTNNAL1-204ENST00000374595 ATP10BO94823 1461 aa24.39■■□□□ 1.49
CTNNAL1-204ENST00000374595 ANKRD30BQ9BXX2 1392 aa24.38■■□□□ 1.49
CTNNAL1-204ENST00000374595 NBPF8Q3BBV2 869 aa24.36■■□□□ 1.49
CTNNAL1-204ENST00000374595 NCOA1Q15788 1441 aa24.36■■□□□ 1.49
CTNNAL1-204ENST00000374595 WASHC2AQ641Q2 1341 aa24.35■■□□□ 1.49
CTNNAL1-204ENST00000374595 SUPT16HQ9Y5B9 1047 aaKnown RBP24.34■■□□□ 1.49
CTNNAL1-204ENST00000374595 ABCA8O94911 1581 aa24.33■■□□□ 1.49
CTNNAL1-204ENST00000374595 HNRNPMP52272 730 aaKnown RBP eCLIP24.32■■□□□ 1.48
CTNNAL1-204ENST00000374595 ITSN2Q9NZM3 1697 aa24.32■■□□□ 1.48
CTNNAL1-204ENST00000374595 EIF4G2P78344 907 aaKnown RBP eCLIP24.32■■□□□ 1.48
CTNNAL1-204ENST00000374595 PTPRGP23470 1445 aa24.31■■□□□ 1.48
CTNNAL1-204ENST00000374595 C11orf95C9JLR9 678 aaPredicted RBP24.31■■□□□ 1.48
CTNNAL1-204ENST00000374595 ZNF326Q5BKZ1 582 aaKnown RBP24.29■■□□□ 1.48
CTNNAL1-204ENST00000374595 PELP1Q8IZL8 1130 aaKnown RBP24.29■■□□□ 1.48
CTNNAL1-204ENST00000374595 ADCY10Q96PN6 1610 aa24.29■■□□□ 1.48
CTNNAL1-204ENST00000374595 PZPP20742 1482 aa24.29■■□□□ 1.48
CTNNAL1-204ENST00000374595 PKD2Q13563 968 aa24.28■■□□□ 1.48
CTNNAL1-204ENST00000374595 RPRD2Q5VT52 1461 aaKnown RBP24.28■■□□□ 1.48
CTNNAL1-204ENST00000374595 CDC42BPAQ5VT25 1732 aa24.27■■□□□ 1.48
CTNNAL1-204ENST00000374595 ABCC10Q5T3U5 1492 aa24.25■■□□□ 1.47
CTNNAL1-204ENST00000374595 ANKRD30AQ9BXX3 1397 aa24.25■■□□□ 1.47
CTNNAL1-204ENST00000374595 CCER2I3L3R5 266 aa24.24■■□□□ 1.47
CTNNAL1-204ENST00000374595 CHD1O14646 1710 aa24.24■■□□□ 1.47
CTNNAL1-204ENST00000374595 TEX14Q8IWB6 1497 aa24.23■■□□□ 1.47
CTNNAL1-204ENST00000374595 ANKRD50Q9ULJ7 1429 aa24.23■■□□□ 1.47
CTNNAL1-204ENST00000374595 TSPY4P0CV99 314 aa24.21■■□□□ 1.47
CTNNAL1-204ENST00000374595 TSPY10P0CW01 314 aa24.21■■□□□ 1.47
CTNNAL1-204ENST00000374595 ADGBQ8N7X0 1667 aa24.21■■□□□ 1.47
CTNNAL1-204ENST00000374595 CROCC2H7BZ55 1655 aa24.2■■□□□ 1.47
CTNNAL1-204ENST00000374595 BCANQ96GW7 911 aa24.2■■□□□ 1.46
CTNNAL1-204ENST00000374595 C9orf84Q5VXU9 1444 aa24.2■■□□□ 1.46
CTNNAL1-204ENST00000374595 NUP155O75694 1391 aa24.19■■□□□ 1.46
CTNNAL1-204ENST00000374595 ERCC6L2Q5T890 1561 aa24.18■■□□□ 1.46
CTNNAL1-204ENST00000374595 CNGB1Q14028 1251 aaPredicted RBP24.18■■□□□ 1.46
CTNNAL1-204ENST00000374595 ADGRL2O95490 1459 aa24.18■■□□□ 1.46
CTNNAL1-204ENST00000374595 KIAA1107Q9UPP5 1409 aa24.14■■□□□ 1.46
CTNNAL1-204ENST00000374595 CCDC184Q52MB2 194 aa24.14■■□□□ 1.46
CTNNAL1-204ENST00000374595 POLR3GLQ9BT43 218 aa24.14■■□□□ 1.45
CTNNAL1-204ENST00000374595 KIF15Q9NS87 1388 aa24.12■■□□□ 1.45
CTNNAL1-204ENST00000374595 CCDC7Q96M83 1385 aa24.1■■□□□ 1.45
CTNNAL1-204ENST00000374595 FKBP8Q14318 412 aa24.1■■□□□ 1.45
CTNNAL1-204ENST00000374595 KDM2AQ9Y2K7 1162 aa24.1■■□□□ 1.45
CTNNAL1-204ENST00000374595 KIF7Q2M1P5 1343 aa24.08■■□□□ 1.45
CTNNAL1-204ENST00000374595 MBD5Q9P267 1494 aa24.08■■□□□ 1.44
CTNNAL1-204ENST00000374595 HNRNPUQ00839 825 aaKnown RBP eCLIP24.08■■□□□ 1.44
CTNNAL1-204ENST00000374595 CDC42BPBQ9Y5S2 1711 aa24.07■■□□□ 1.44
CTNNAL1-204ENST00000374595 SAMD9LQ8IVG5 1584 aa24.06■■□□□ 1.44
CTNNAL1-204ENST00000374595 CNTLNQ9NXG0 1405 aa24.06■■□□□ 1.44
CTNNAL1-204ENST00000374595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.05■■□□□ 1.443e-6■■■■■ 27.3
CTNNAL1-204ENST00000374595 SPATA31E1Q6ZUB1 1445 aa24.04■■□□□ 1.44
CTNNAL1-204ENST00000374595 TTC37Q6PGP7 1564 aa24.03■■□□□ 1.44
CTNNAL1-204ENST00000374595 SHANK2Q9UPX8 1470 aa24.02■■□□□ 1.44
CTNNAL1-204ENST00000374595 ARHGAP5Q13017 1502 aa24■■□□□ 1.43
CTNNAL1-204ENST00000374595 SYCP2Q9BX26 1530 aa24■■□□□ 1.43
CTNNAL1-204ENST00000374595 PRKRIP1Q9H875 184 aaPredicted RBP24■■□□□ 1.43
CTNNAL1-204ENST00000374595 FAM9BQ8IZU0 186 aa23.99■■□□□ 1.43
CTNNAL1-204ENST00000374595 CCDC141Q6ZP82 1450 aa23.99■■□□□ 1.43
CTNNAL1-204ENST00000374595 DCAF11Q8TEB1 546 aa23.99■■□□□ 1.43
CTNNAL1-204ENST00000374595 USP47Q96K76 1375 aa23.98■■□□□ 1.43
CTNNAL1-204ENST00000374595 PREX2Q70Z35 1606 aa23.98■■□□□ 1.43
CTNNAL1-204ENST00000374595 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.98■■□□□ 1.436e-7■■■■■ 45.1
CTNNAL1-204ENST00000374595 SHROOM2Q13796 1616 aa23.97■■□□□ 1.43
CTNNAL1-204ENST00000374595 RGL3Q3MIN7 710 aa23.95■■□□□ 1.42
CTNNAL1-204ENST00000374595 ARHGEF5Q12774 1597 aa23.94■■□□□ 1.42
CTNNAL1-204ENST00000374595 MRS2Q9HD23 443 aa23.93■■□□□ 1.42
CTNNAL1-204ENST00000374595 CARD11Q9BXL7 1154 aa23.93■■□□□ 1.42
CTNNAL1-204ENST00000374595 ABCC2Q92887 1545 aa23.92■■□□□ 1.42
CTNNAL1-204ENST00000374595 BCORL1Q5H9F3 1711 aa23.91■■□□□ 1.42
CTNNAL1-204ENST00000374595 SENP3-EIF4A1A0A087X0R7 540 aa23.9■■□□□ 1.42
CTNNAL1-204ENST00000374595 IRX6P78412 446 aaPredicted RBP23.9■■□□□ 1.42
CTNNAL1-204ENST00000374595 FAM135AQ9P2D6 1515 aa23.89■■□□□ 1.41
CTNNAL1-204ENST00000374595 NEFLP07196 543 aa23.88■■□□□ 1.41
CTNNAL1-204ENST00000374595 ARHGEF12Q9NZN5 1544 aa23.87■■□□□ 1.41
CTNNAL1-204ENST00000374595 ST20-MTHFSA0A0A6YYL1 179 aa23.86■■□□□ 1.41
CTNNAL1-204ENST00000374595 RSPH4AQ5TD94 716 aa23.86■■□□□ 1.41
CTNNAL1-204ENST00000374595 PLEKHH2Q8IVE3 1493 aa23.86■■□□□ 1.41
CTNNAL1-204ENST00000374595 KDM5DQ9BY66 1539 aa23.85■■□□□ 1.41
CTNNAL1-204ENST00000374595 KDM5CP41229 1560 aa23.83■■□□□ 1.4
CTNNAL1-204ENST00000374595 MYO5CQ9NQX4 1742 aa23.83■■□□□ 1.4
CTNNAL1-204ENST00000374595 ZCCHC11Q5TAX3 1644 aaKnown RBP23.81■■□□□ 1.4
CTNNAL1-204ENST00000374595 POLR1AO95602 1720 aaPredicted RBP23.8■■□□□ 1.4
CTNNAL1-204ENST00000374595 NBPF1Q3BBV0 1214 aa23.79■■□□□ 1.4
CTNNAL1-204ENST00000374595 AFAP1Q8N556 730 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 274 ms