RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 RICTORQ6R327 1708 aa17.62■□□□□ 0.41
CSGALNACT2-201ENST00000374466 PTPN23Q9H3S7 1636 aa17.61■□□□□ 0.41
CSGALNACT2-201ENST00000374466 PLXNC1O60486 1568 aa17.59■□□□□ 0.41
CSGALNACT2-201ENST00000374466 ADGBQ8N7X0 1667 aa17.59■□□□□ 0.41
CSGALNACT2-201ENST00000374466 AKNAQ7Z591 1439 aa17.59■□□□□ 0.41
CSGALNACT2-201ENST00000374466 P3H3Q8IVL6 736 aa17.59■□□□□ 0.41
CSGALNACT2-201ENST00000374466 FRMPD1Q5SYB0 1578 aa17.58■□□□□ 0.4
CSGALNACT2-201ENST00000374466 INO80Q9ULG1 1556 aaPredicted RBP17.58■□□□□ 0.4
CSGALNACT2-201ENST00000374466 PLEKHD1A6NEE1 506 aa17.57■□□□□ 0.4
CSGALNACT2-201ENST00000374466 ADGRL2O95490 1459 aa17.56■□□□□ 0.4
CSGALNACT2-201ENST00000374466 MTUS2Q5JR59 1369 aa17.56■□□□□ 0.4
CSGALNACT2-201ENST00000374466 FGD6Q6ZV73 1430 aa17.55■□□□□ 0.4
CSGALNACT2-201ENST00000374466 MBD5Q9P267 1494 aa17.54■□□□□ 0.4
CSGALNACT2-201ENST00000374466 NPM1P06748 294 aaKnown RBP eCLIP17.53■□□□□ 0.4
CSGALNACT2-201ENST00000374466 FAM135AQ9P2D6 1515 aa17.53■□□□□ 0.4
CSGALNACT2-201ENST00000374466 MAGI2Q86UL8 1455 aa17.52■□□□□ 0.4
CSGALNACT2-201ENST00000374466 CYB5RLQ6IPT4 315 aa17.52■□□□□ 0.4
CSGALNACT2-201ENST00000374466 RTEL1-TNFRSF6BF6WH68 1400 aa17.52■□□□□ 0.4
CSGALNACT2-201ENST00000374466 CAMSAP2Q08AD1 1489 aa17.51■□□□□ 0.39
CSGALNACT2-201ENST00000374466 GCC2Q8IWJ2 1684 aa17.51■□□□□ 0.39
CSGALNACT2-201ENST00000374466 EIF2AK4Q9P2K8 1649 aaKnown RBP17.5■□□□□ 0.39
CSGALNACT2-201ENST00000374466 CD109Q6YHK3 1445 aa17.5■□□□□ 0.39
CSGALNACT2-201ENST00000374466 KANK4Q5T7N3 995 aaPredicted RBP17.48■□□□□ 0.39
CSGALNACT2-201ENST00000374466 MLH3Q9UHC1 1453 aa17.48■□□□□ 0.39
CSGALNACT2-201ENST00000374466 FANCAO15360 1455 aa17.47■□□□□ 0.39
CSGALNACT2-201ENST00000374466 CCNB3Q8WWL7 1395 aa17.46■□□□□ 0.39
CSGALNACT2-201ENST00000374466 ROCK1Q13464 1354 aa17.46■□□□□ 0.39
CSGALNACT2-201ENST00000374466 POGZQ7Z3K3 1410 aa17.45■□□□□ 0.38
CSGALNACT2-201ENST00000374466 RSPH4AQ5TD94 716 aa17.45■□□□□ 0.38
CSGALNACT2-201ENST00000374466 ARHGAP5Q13017 1502 aa17.45■□□□□ 0.38
CSGALNACT2-201ENST00000374466 HECW2Q9P2P5 1572 aa17.44■□□□□ 0.38
CSGALNACT2-201ENST00000374466 ZFYVE16Q7Z3T8 1539 aa17.44■□□□□ 0.38
CSGALNACT2-201ENST00000374466 ARHGEF12Q9NZN5 1544 aa17.44■□□□□ 0.38
CSGALNACT2-201ENST00000374466 CCDC141Q6ZP82 1450 aa17.43■□□□□ 0.38
CSGALNACT2-201ENST00000374466 ZNF518AQ6AHZ1 1483 aa17.42■□□□□ 0.38
CSGALNACT2-201ENST00000374466 KIDINS220Q9ULH0 1771 aa17.42■□□□□ 0.38
CSGALNACT2-201ENST00000374466 DEPDC5O75140 1603 aa17.42■□□□□ 0.38
CSGALNACT2-201ENST00000374466 ARHGEF40Q8TER5 1519 aa17.41■□□□□ 0.38
CSGALNACT2-201ENST00000374466 AGLP35573 1532 aa17.4■□□□□ 0.38
CSGALNACT2-201ENST00000374466 RNF17Q9BXT8 1623 aaKnown RBP17.4■□□□□ 0.38
CSGALNACT2-201ENST00000374466 ACIN1Q9UKV3 1341 aaKnown RBP17.39■□□□□ 0.38
CSGALNACT2-201ENST00000374466 SYCP2Q9BX26 1530 aa17.39■□□□□ 0.37
CSGALNACT2-201ENST00000374466 APLP2Q06481 763 aa17.39■□□□□ 0.37
CSGALNACT2-201ENST00000374466 DAPK1P53355 1430 aa17.38■□□□□ 0.37
CSGALNACT2-201ENST00000374466 KDM5DQ9BY66 1539 aa17.37■□□□□ 0.37
CSGALNACT2-201ENST00000374466 ADGRL1O94910 1474 aa17.36■□□□□ 0.37
CSGALNACT2-201ENST00000374466 ABCC5O15440 1437 aa17.36■□□□□ 0.37
CSGALNACT2-201ENST00000374466 UNC13BO14795 1591 aa17.35■□□□□ 0.37
CSGALNACT2-201ENST00000374466 EHMT2Q96KQ7 1210 aa17.35■□□□□ 0.37
CSGALNACT2-201ENST00000374466 DENND4BO75064 1496 aaPredicted RBP17.35■□□□□ 0.37
CSGALNACT2-201ENST00000374466 DIP2CQ9Y2E4 1556 aa17.35■□□□□ 0.37
CSGALNACT2-201ENST00000374466 ATP7AQ04656 1500 aa17.34■□□□□ 0.37
CSGALNACT2-201ENST00000374466 EFCAB2Q5VUJ9 269 aa17.34■□□□□ 0.37
CSGALNACT2-201ENST00000374466 ABCA6Q8N139 1617 aa17.33■□□□□ 0.37
CSGALNACT2-201ENST00000374466 VWDEQ8N2E2 1590 aa17.33■□□□□ 0.37
CSGALNACT2-201ENST00000374466 DUOX2Q9NRD8 1548 aa17.32■□□□□ 0.36
CSGALNACT2-201ENST00000374466 ZC3H13Q5T200 1668 aaKnown RBP17.32■□□□□ 0.36
CSGALNACT2-201ENST00000374466 RANGAP1P46060 587 aaPredicted RBP17.32■□□□□ 0.36
CSGALNACT2-201ENST00000374466 KDM6BO15054 1643 aa17.31■□□□□ 0.36
CSGALNACT2-201ENST00000374466 TSPOAP1O95153 1857 aa17.3■□□□□ 0.36
CSGALNACT2-201ENST00000374466 HRCP23327 699 aa17.3■□□□□ 0.36
CSGALNACT2-201ENST00000374466 ERBINQ96RT1 1412 aa17.3■□□□□ 0.36
CSGALNACT2-201ENST00000374466 HFM1A2PYH4 1435 aa17.28■□□□□ 0.36
CSGALNACT2-201ENST00000374466 LMTK2Q8IWU2 1503 aa17.27■□□□□ 0.36
CSGALNACT2-201ENST00000374466 MROH2AA6NES4 1674 aa17.27■□□□□ 0.35
CSGALNACT2-201ENST00000374466 PRDM15P57071 1507 aaPredicted RBP17.26■□□□□ 0.35
CSGALNACT2-201ENST00000374466 TRAPPC8Q9Y2L5 1435 aa17.26■□□□□ 0.35
CSGALNACT2-201ENST00000374466 MROH1Q8NDA8 1641 aa17.25■□□□□ 0.35
CSGALNACT2-201ENST00000374466 COL17A1Q9UMD9 1497 aaPredicted RBP17.25■□□□□ 0.35
CSGALNACT2-201ENST00000374466 SCAPERQ9BY12 1400 aa17.25■□□□□ 0.35
CSGALNACT2-201ENST00000374466 FAM69CQ0P6D2 419 aa17.24■□□□□ 0.35
CSGALNACT2-201ENST00000374466 NCOA1Q15788 1441 aa17.24■□□□□ 0.35
CSGALNACT2-201ENST00000374466 C9orf84Q5VXU9 1444 aa17.24■□□□□ 0.35
CSGALNACT2-201ENST00000374466 PTPRKQ15262 1439 aa17.24■□□□□ 0.35
CSGALNACT2-201ENST00000374466 IQGAP3Q86VI3 1631 aa17.23■□□□□ 0.35
CSGALNACT2-201ENST00000374466 CFDP1Q9UEE9 299 aaPredicted RBP17.23■□□□□ 0.35
CSGALNACT2-201ENST00000374466 SIGLEC1Q9BZZ2 1709 aa17.2■□□□□ 0.34
CSGALNACT2-201ENST00000374466 ATP10AO60312 1499 aa17.19■□□□□ 0.34
CSGALNACT2-201ENST00000374466 NEURL4Q96JN8 1562 aa17.19■□□□□ 0.34
CSGALNACT2-201ENST00000374466 NAIPQ13075 1403 aa17.17■□□□□ 0.34
CSGALNACT2-201ENST00000374466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.15■□□□□ 0.34
CSGALNACT2-201ENST00000374466 HNRNPUL2Q1KMD3 747 aaKnown RBP17.15■□□□□ 0.34
CSGALNACT2-201ENST00000374466 ADAMTSL3P82987 1691 aa17.14■□□□□ 0.33
CSGALNACT2-201ENST00000374466 ANKRD30AQ9BXX3 1397 aa17.14■□□□□ 0.33
CSGALNACT2-201ENST00000374466 DHX29Q7Z478 1369 aaKnown RBP17.14■□□□□ 0.33
CSGALNACT2-201ENST00000374466 ATP1B4Q9UN42 357 aaPredicted RBP17.13■□□□□ 0.33
CSGALNACT2-201ENST00000374466 A2MP01023 1474 aa17.13■□□□□ 0.33
CSGALNACT2-201ENST00000374466 TET3O43151 1660 aa17.13■□□□□ 0.33
CSGALNACT2-201ENST00000374466 KDM5AP29375 1690 aaKnown RBP17.12■□□□□ 0.33
CSGALNACT2-201ENST00000374466 PPP6R1Q9UPN7 881 aa17.12■□□□□ 0.33
CSGALNACT2-201ENST00000374466 KCNH8Q96L42 1107 aa17.11■□□□□ 0.33
CSGALNACT2-201ENST00000374466 TTBK1Q5TCY1 1321 aaPredicted RBP17.11■□□□□ 0.33
CSGALNACT2-201ENST00000374466 TRIM26Q12899 539 aaPredicted RBP17.11■□□□□ 0.33
CSGALNACT2-201ENST00000374466 ARHGAP31Q2M1Z3 1444 aa17.08■□□□□ 0.32
CSGALNACT2-201ENST00000374466 ZNF644Q9H582 1327 aaPredicted RBP17.07■□□□□ 0.32
CSGALNACT2-201ENST00000374466 RPRD2Q5VT52 1461 aaKnown RBP17.07■□□□□ 0.32
CSGALNACT2-201ENST00000374466 ARID3CA6NKF2 412 aa17.05■□□□□ 0.32
CSGALNACT2-201ENST00000374466 SETD5Q9C0A6 1442 aa17.05■□□□□ 0.32
CSGALNACT2-201ENST00000374466 CAMSAP1Q5T5Y3 1602 aa17.04■□□□□ 0.32
CSGALNACT2-201ENST00000374466 SPAG9O60271 1321 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms