RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 CRBNQ96SW2 442 aa19.61■□□□□ 0.73
SRPK1-204ENST00000373825 WRNQ14191 1432 aaPredicted RBP eCLIP19.6■□□□□ 0.73
SRPK1-204ENST00000373825 MFAP1P55081 439 aaKnown RBP19.6■□□□□ 0.73
SRPK1-204ENST00000373825 PABPN1Q86U42 306 aaKnown RBP eCLIP19.6■□□□□ 0.731e-9■□□□□ 9.3
SRPK1-204ENST00000373825 SETD5Q9C0A6 1442 aa19.6■□□□□ 0.73
SRPK1-204ENST00000373825 VPS8Q8N3P4 1428 aa19.59■□□□□ 0.73
SRPK1-204ENST00000373825 ZNF771Q7L3S4 317 aaPredicted RBP19.59■□□□□ 0.73
SRPK1-204ENST00000373825 PRDM10Q9NQV6 1147 aa19.59■□□□□ 0.73
SRPK1-204ENST00000373825 KIAA2012Q0VF49 1180 aa19.58■□□□□ 0.73
SRPK1-204ENST00000373825 ZHX1Q9UKY1 873 aaPredicted RBP19.57■□□□□ 0.72
SRPK1-204ENST00000373825 CCDC88BA6NC98 1476 aa19.56■□□□□ 0.72
SRPK1-204ENST00000373825 KIAA1211Q6ZU35 1233 aa19.56■□□□□ 0.72
SRPK1-204ENST00000373825 SKAP1Q86WV1 359 aa19.56■□□□□ 0.72
SRPK1-204ENST00000373825 AKNAQ7Z591 1439 aa19.56■□□□□ 0.72
SRPK1-204ENST00000373825 TPM2P07951 284 aa19.55■□□□□ 0.72
SRPK1-204ENST00000373825 CARD11Q9BXL7 1154 aa19.55■□□□□ 0.72
SRPK1-204ENST00000373825 CCDC184Q52MB2 194 aa19.54■□□□□ 0.72
SRPK1-204ENST00000373825 FOXD1Q16676 465 aa19.54■□□□□ 0.72
SRPK1-204ENST00000373825 ESPNB1AK53 854 aa19.53■□□□□ 0.72
SRPK1-204ENST00000373825 FTSJ3Q8IY81 847 aaKnown RBP19.53■□□□□ 0.72
SRPK1-204ENST00000373825 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.52■□□□□ 0.72
SRPK1-204ENST00000373825 C11orf95C9JLR9 678 aaPredicted RBP19.52■□□□□ 0.72
SRPK1-204ENST00000373825 MRE11P49959 708 aa19.52■□□□□ 0.72
SRPK1-204ENST00000373825 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
SRPK1-204ENST00000373825 DDX49Q9Y6V7 483 aaKnown RBP19.5■□□□□ 0.71
SRPK1-204ENST00000373825 CALD1Q05682 793 aaKnown RBP19.5■□□□□ 0.71
SRPK1-204ENST00000373825 MTUS2Q5JR59 1369 aa19.5■□□□□ 0.71
SRPK1-204ENST00000373825 CEP164Q9UPV0 1460 aa19.49■□□□□ 0.71
SRPK1-204ENST00000373825 DDX11L8A8MPP1 907 aa19.49■□□□□ 0.71
SRPK1-204ENST00000373825 CENPQQ7L2Z9 268 aaPredicted RBP19.48■□□□□ 0.71
SRPK1-204ENST00000373825 MAP7D2Q96T17 732 aa19.47■□□□□ 0.71
SRPK1-204ENST00000373825 TRAK2O60296 914 aa19.46■□□□□ 0.71
SRPK1-204ENST00000373825 BBXQ8WY36 941 aaPredicted RBP19.46■□□□□ 0.71
SRPK1-204ENST00000373825 MROH2BQ7Z745 1585 aa19.45■□□□□ 0.7
SRPK1-204ENST00000373825 WASHC2AQ641Q2 1341 aa19.44■□□□□ 0.7
SRPK1-204ENST00000373825 RGL3Q3MIN7 710 aa19.44■□□□□ 0.7
SRPK1-204ENST00000373825 PDCL3Q9H2J4 239 aa19.44■□□□□ 0.7
SRPK1-204ENST00000373825 DRC7Q8IY82 874 aa19.4■□□□□ 0.7
SRPK1-204ENST00000373825 FOXD4L5Q5VV16 416 aaPredicted RBP19.4■□□□□ 0.7
SRPK1-204ENST00000373825 FOXD4L4Q8WXT5 416 aaPredicted RBP19.4■□□□□ 0.7
SRPK1-204ENST00000373825 CLUAP1Q96AJ1 413 aa19.4■□□□□ 0.7
SRPK1-204ENST00000373825 CHMP5Q9NZZ3 219 aa19.39■□□□□ 0.7
SRPK1-204ENST00000373825 L3MBTL2Q969R5 705 aa19.39■□□□□ 0.69
SRPK1-204ENST00000373825 BCL11BQ9C0K0 894 aaPredicted RBP19.39■□□□□ 0.69
SRPK1-204ENST00000373825 KNSTRNQ9Y448 316 aa19.39■□□□□ 0.69
SRPK1-204ENST00000373825 NASPP49321 788 aaPredicted RBP19.38■□□□□ 0.69
SRPK1-204ENST00000373825 RRAGDQ9NQL2 400 aaPredicted RBP19.37■□□□□ 0.69
SRPK1-204ENST00000373825 GRPEL1Q9HAV7 217 aa19.36■□□□□ 0.69
SRPK1-204ENST00000373825 WASHC2CQ9Y4E1 1318 aa19.35■□□□□ 0.69
SRPK1-204ENST00000373825 UQCRHLA0A096LP55 91 aa19.34■□□□□ 0.69
SRPK1-204ENST00000373825 UQCRHP07919 91 aa19.34■□□□□ 0.69
SRPK1-204ENST00000373825 PTMSP20962 102 aa19.34■□□□□ 0.69
SRPK1-204ENST00000373825 PDE3BQ13370 1112 aa19.34■□□□□ 0.69
SRPK1-204ENST00000373825 RUSC2Q8N2Y8 1516 aa19.34■□□□□ 0.69
SRPK1-204ENST00000373825 MTERF4Q7Z6M4 381 aaKnown RBP19.34■□□□□ 0.69
SRPK1-204ENST00000373825 PANK2Q9BZ23 570 aa19.32■□□□□ 0.68
SRPK1-204ENST00000373825 MPNDQ8N594 471 aa19.32■□□□□ 0.68
SRPK1-204ENST00000373825 CDCA7LQ96GN5 454 aa19.31■□□□□ 0.68
SRPK1-204ENST00000373825 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.31■□□□□ 0.684e-8■■□□□ 12.9
SRPK1-204ENST00000373825 SKOR2Q2VWA4 1001 aaPredicted RBP19.3■□□□□ 0.68
SRPK1-204ENST00000373825 FOXD4L6Q3SYB3 417 aaPredicted RBP19.3■□□□□ 0.68
SRPK1-204ENST00000373825 FOXD4L3Q6VB84 417 aaPredicted RBP19.3■□□□□ 0.68
SRPK1-204ENST00000373825 KTN1Q86UP2 1357 aaKnown RBP19.3■□□□□ 0.68
SRPK1-204ENST00000373825 CSPP1Q1MSJ5 1256 aa19.3■□□□□ 0.68
SRPK1-204ENST00000373825 DCAF11Q8TEB1 546 aa19.29■□□□□ 0.68
SRPK1-204ENST00000373825 RWDD1Q9H446 243 aaPredicted RBP19.29■□□□□ 0.68
SRPK1-204ENST00000373825 PLCD3Q8N3E9 789 aa19.28■□□□□ 0.68
SRPK1-204ENST00000373825 CLCN1P35523 988 aa19.28■□□□□ 0.68
SRPK1-204ENST00000373825 RNF214Q8ND24 703 aa19.28■□□□□ 0.68
SRPK1-204ENST00000373825 CBX1P83916 185 aa19.28■□□□□ 0.68
SRPK1-204ENST00000373825 WIZO95785 1651 aa19.28■□□□□ 0.68
SRPK1-204ENST00000373825 APPP05067 770 aa19.27■□□□□ 0.68
SRPK1-204ENST00000373825 GOLGA2Q08379 1002 aa19.27■□□□□ 0.68
SRPK1-204ENST00000373825 COG6Q9Y2V7 657 aa19.27■□□□□ 0.68
SRPK1-204ENST00000373825 MCM4P33991 863 aa19.26■□□□□ 0.67
SRPK1-204ENST00000373825 AEBP1Q8IUX7 1158 aa19.26■□□□□ 0.67
SRPK1-204ENST00000373825 RALBP1Q15311 655 aa19.25■□□□□ 0.67
SRPK1-204ENST00000373825 NLRP13Q86W25 1043 aa19.25■□□□□ 0.67
SRPK1-204ENST00000373825 CCDC146Q8IYE0 955 aa19.25■□□□□ 0.67
SRPK1-204ENST00000373825 MAPK8IP3Q9UPT6 1336 aa19.24■□□□□ 0.67
SRPK1-204ENST00000373825 XRCC6P12956 609 aaKnown RBP eCLIP19.24■□□□□ 0.67
SRPK1-204ENST00000373825 CGNQ9P2M7 1197 aaKnown RBP19.23■□□□□ 0.67
SRPK1-204ENST00000373825 CASC1Q6TDU7 716 aa19.23■□□□□ 0.67
SRPK1-204ENST00000373825 BCL2L13Q9BXK5 485 aa19.22■□□□□ 0.67
SRPK1-204ENST00000373825 PMFBP1Q8TBY8 1022 aa19.22■□□□□ 0.67
SRPK1-204ENST00000373825 NOL8Q76FK4 1167 aaKnown RBP19.21■□□□□ 0.67
SRPK1-204ENST00000373825 APBB1O00213 710 aa19.2■□□□□ 0.66
SRPK1-204ENST00000373825 PDIA4P13667 645 aaKnown RBP19.2■□□□□ 0.66
SRPK1-204ENST00000373825 XPCQ01831 940 aaPredicted RBP19.2■□□□□ 0.66
SRPK1-204ENST00000373825 ZNF592Q92610 1267 aa19.2■□□□□ 0.66
SRPK1-204ENST00000373825 E9PSI1 815 aa19.19■□□□□ 0.66
SRPK1-204ENST00000373825 CCDC173Q0VFZ6 552 aa19.19■□□□□ 0.66
SRPK1-204ENST00000373825 CHMP4AQ9BY43 222 aa19.19■□□□□ 0.66
SRPK1-204ENST00000373825 ZSCAN30Q86W11 494 aa19.19■□□□□ 0.66
SRPK1-204ENST00000373825 SYAP1Q96A49 352 aaPredicted RBP19.18■□□□□ 0.66
SRPK1-204ENST00000373825 CAVIN1Q6NZI2 390 aaKnown RBP19.18■□□□□ 0.66
SRPK1-204ENST00000373825 ZRSR1Q15695 479 aaKnown RBP19.17■□□□□ 0.66
SRPK1-204ENST00000373825 MCTP1Q6DN14 999 aa19.17■□□□□ 0.66
SRPK1-204ENST00000373825 C22orf23Q9BZE7 217 aa19.17■□□□□ 0.66
SRPK1-204ENST00000373825 GOLGA6L4A6NEF3 574 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms