RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 ARHGAP5Q13017 1502 aa28.84■■■□□ 2.21
PBX3-205ENST00000373492 SUPT6HQ7KZ85 1726 aaKnown RBP28.82■■■□□ 2.2
PBX3-205ENST00000373492 FRMPD1Q5SYB0 1578 aa28.81■■■□□ 2.2
PBX3-205ENST00000373492 CDC42BPAQ5VT25 1732 aa28.8■■■□□ 2.2
PBX3-205ENST00000373492 SCAPERQ9BY12 1400 aa28.8■■■□□ 2.2
PBX3-205ENST00000373492 PREX2Q70Z35 1606 aa28.78■■■□□ 2.2
PBX3-205ENST00000373492 RICTORQ6R327 1708 aa28.77■■■□□ 2.2
PBX3-205ENST00000373492 CDC42BPBQ9Y5S2 1711 aa28.77■■■□□ 2.2
PBX3-205ENST00000373492 AEBP2Q6ZN18 517 aaPredicted RBP28.77■■■□□ 2.2
PBX3-205ENST00000373492 LRRC9Q6ZRR7 1453 aa28.75■■■□□ 2.19
PBX3-205ENST00000373492 POGZQ7Z3K3 1410 aa28.75■■■□□ 2.19
PBX3-205ENST00000373492 GPATCH8Q9UKJ3 1502 aaKnown RBP28.74■■■□□ 2.19
PBX3-205ENST00000373492 KDM4FA0A1W2PPD8 638 aa28.73■■■□□ 2.19
PBX3-205ENST00000373492 ITSN2Q9NZM3 1697 aa28.73■■■□□ 2.19
PBX3-205ENST00000373492 CCNB3Q8WWL7 1395 aa28.73■■■□□ 2.19
PBX3-205ENST00000373492 ZMYM4Q5VZL5 1548 aa28.72■■■□□ 2.19
PBX3-205ENST00000373492 MAGI2Q86UL8 1455 aa28.7■■■□□ 2.18
PBX3-205ENST00000373492 ZNF518AQ6AHZ1 1483 aa28.67■■■□□ 2.18
PBX3-205ENST00000373492 CFDP1Q9UEE9 299 aaPredicted RBP28.67■■■□□ 2.18
PBX3-205ENST00000373492 ABCC1P33527 1531 aa28.64■■■□□ 2.18
PBX3-205ENST00000373492 ARHGEF40Q8TER5 1519 aa28.64■■■□□ 2.18
PBX3-205ENST00000373492 NCOA2Q15596 1464 aa28.64■■■□□ 2.17
PBX3-205ENST00000373492 KANK4Q5T7N3 995 aaPredicted RBP28.63■■■□□ 2.17
PBX3-205ENST00000373492 ZNF777Q9ULD5 760 aaPredicted RBP28.63■■■□□ 2.17
PBX3-205ENST00000373492 AFAP1Q8N556 730 aa28.62■■■□□ 2.17
PBX3-205ENST00000373492 ZFYVE16Q7Z3T8 1539 aa28.62■■■□□ 2.17
PBX3-205ENST00000373492 ARHGEF12Q9NZN5 1544 aa28.6■■■□□ 2.17
PBX3-205ENST00000373492 KDM5CP41229 1560 aa28.59■■■□□ 2.17
PBX3-205ENST00000373492 YEATS2Q9ULM3 1422 aa28.59■■■□□ 2.17
PBX3-205ENST00000373492 PLEKHH2Q8IVE3 1493 aa28.59■■■□□ 2.17
PBX3-205ENST00000373492 SAMD9LQ8IVG5 1584 aa28.58■■■□□ 2.17
PBX3-205ENST00000373492 KIAA1107Q9UPP5 1409 aa28.58■■■□□ 2.17
PBX3-205ENST00000373492 TRAPPC8Q9Y2L5 1435 aa28.57■■■□□ 2.16
PBX3-205ENST00000373492 MLH3Q9UHC1 1453 aa28.53■■■□□ 2.16
PBX3-205ENST00000373492 ARID4BQ4LE39 1312 aaPredicted RBP28.53■■■□□ 2.16
PBX3-205ENST00000373492 SYCP2Q9BX26 1530 aa28.52■■■□□ 2.16
PBX3-205ENST00000373492 ATP10AO60312 1499 aa28.52■■■□□ 2.16
PBX3-205ENST00000373492 HNRNPMP52272 730 aaKnown RBP eCLIP28.51■■■□□ 2.15
PBX3-205ENST00000373492 HECW2Q9P2P5 1572 aa28.5■■■□□ 2.15
PBX3-205ENST00000373492 MYT1LQ9UL68 1186 aa28.5■■■□□ 2.15
PBX3-205ENST00000373492 C9orf84Q5VXU9 1444 aa28.48■■■□□ 2.15
PBX3-205ENST00000373492 ZNF644Q9H582 1327 aaPredicted RBP28.47■■■□□ 2.15
PBX3-205ENST00000373492 MYOM3Q5VTT5 1437 aa28.43■■■□□ 2.14
PBX3-205ENST00000373492 BCORL1Q5H9F3 1711 aa28.43■■■□□ 2.14
PBX3-205ENST00000373492 SPAG9O60271 1321 aaKnown RBP28.43■■■□□ 2.14
PBX3-205ENST00000373492 MBD5Q9P267 1494 aa28.42■■■□□ 2.14
PBX3-205ENST00000373492 ADAMTSL3P82987 1691 aa28.42■■■□□ 2.14
PBX3-205ENST00000373492 DIP2CQ9Y2E4 1556 aa28.41■■■□□ 2.14
PBX3-205ENST00000373492 RSPH4AQ5TD94 716 aa28.39■■■□□ 2.14
PBX3-205ENST00000373492 CAMSAP2Q08AD1 1489 aa28.39■■■□□ 2.13
PBX3-205ENST00000373492 REREQ9P2R6 1566 aa28.38■■■□□ 2.13
PBX3-205ENST00000373492 MIA2Q96PC5 1412 aa28.38■■■□□ 2.13
PBX3-205ENST00000373492 KIDINS220Q9ULH0 1771 aa28.38■■■□□ 2.13
PBX3-205ENST00000373492 SIGLEC1Q9BZZ2 1709 aa28.38■■■□□ 2.13
PBX3-205ENST00000373492 ABCA6Q8N139 1617 aa28.37■■■□□ 2.13
PBX3-205ENST00000373492 PTPN23Q9H3S7 1636 aa28.35■■■□□ 2.13
PBX3-205ENST00000373492 ATP7AQ04656 1500 aa28.33■■■□□ 2.13
PBX3-205ENST00000373492 PPARGC1BQ86YN6 1023 aaKnown RBP28.32■■■□□ 2.12
PBX3-205ENST00000373492 CCDC141Q6ZP82 1450 aa28.32■■■□□ 2.12
PBX3-205ENST00000373492 INO80Q9ULG1 1556 aaPredicted RBP28.32■■■□□ 2.12
PBX3-205ENST00000373492 RTEL1-TNFRSF6BF6WH68 1400 aa28.31■■■□□ 2.12
PBX3-205ENST00000373492 AGLP35573 1532 aa28.3■■■□□ 2.12
PBX3-205ENST00000373492 MLECQ14165 292 aa28.3■■■□□ 2.12
PBX3-205ENST00000373492 MADDQ8WXG6 1647 aa28.29■■■□□ 2.12
PBX3-205ENST00000373492 PTPRMP28827 1452 aa28.29■■■□□ 2.12
PBX3-205ENST00000373492 FGD6Q6ZV73 1430 aa28.29■■■□□ 2.12
PBX3-205ENST00000373492 ARHGEF5Q12774 1597 aa28.28■■■□□ 2.12
PBX3-205ENST00000373492 TSPY4P0CV99 314 aa28.25■■■□□ 2.11
PBX3-205ENST00000373492 TSPY10P0CW01 314 aa28.25■■■□□ 2.11
PBX3-205ENST00000373492 A2MP01023 1474 aa28.22■■■□□ 2.11
PBX3-205ENST00000373492 TCOF1Q13428 1488 aaKnown RBP28.22■■■□□ 2.11
PBX3-205ENST00000373492 CROCC2H7BZ55 1655 aa28.22■■■□□ 2.11
PBX3-205ENST00000373492 RIMS1Q86UR5 1692 aaKnown RBP28.2■■■□□ 2.11
PBX3-205ENST00000373492 PLXNC1O60486 1568 aa28.18■■■□□ 2.1
PBX3-205ENST00000373492 ADGBQ8N7X0 1667 aa28.18■■■□□ 2.1
PBX3-205ENST00000373492 FER1L4A9Z1Z3 1794 aa28.18■■■□□ 2.1
PBX3-205ENST00000373492 DNMT1P26358 1616 aaKnown RBP28.18■■■□□ 2.1
PBX3-205ENST00000373492 DHX29Q7Z478 1369 aaKnown RBP28.15■■■□□ 2.1
PBX3-205ENST00000373492 MAST1Q9Y2H9 1570 aa28.13■■■□□ 2.09
PBX3-205ENST00000373492 ESF1Q9H501 851 aaKnown RBP28.12■■■□□ 2.09
PBX3-205ENST00000373492 FAM50AQ14320 339 aaKnown RBP28.11■■■□□ 2.09
PBX3-205ENST00000373492 ABCC5O15440 1437 aa28.09■■■□□ 2.09
PBX3-205ENST00000373492 DAPK1P53355 1430 aa28.08■■■□□ 2.09
PBX3-205ENST00000373492 CNTLNQ9NXG0 1405 aa28.08■■■□□ 2.09
PBX3-205ENST00000373492 PPP6R1Q9UPN7 881 aa28.07■■■□□ 2.08
PBX3-205ENST00000373492 SHANK2Q9UPX8 1470 aa28.07■■■□□ 2.08
PBX3-205ENST00000373492 GGT6Q6P531 493 aa28.04■■■□□ 2.08
PBX3-205ENST00000373492 PLPPR3Q6T4P5 718 aa28.04■■■□□ 2.08
PBX3-205ENST00000373492 RRBP1Q9P2E9 1410 aaKnown RBP28.03■■■□□ 2.08
PBX3-205ENST00000373492 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.02■■■□□ 2.08
PBX3-205ENST00000373492 KIF3BO15066 747 aa28.01■■■□□ 2.07
PBX3-205ENST00000373492 CEBPAP49715 358 aaPredicted RBP28■■■□□ 2.07
PBX3-205ENST00000373492 DUOX2Q9NRD8 1548 aa27.95■■■□□ 2.06
PBX3-205ENST00000373492 ZMYM3Q14202 1370 aa27.95■■■□□ 2.06
PBX3-205ENST00000373492 MROH2AA6NES4 1674 aa27.94■■■□□ 2.06
PBX3-205ENST00000373492 KIF15Q9NS87 1388 aa27.94■■■□□ 2.06
PBX3-205ENST00000373492 ANKRD30AQ9BXX3 1397 aa27.93■■■□□ 2.06
PBX3-205ENST00000373492 LMTK3Q96Q04 1460 aa27.93■■■□□ 2.06
PBX3-205ENST00000373492 C3P01024 1663 aa27.93■■■□□ 2.06
PBX3-205ENST00000373492 RRP7BPQ9NSQ0 103 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms