RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 TSPY10P0CW01 314 aa14.28□□□□□ -0.12
PGK1-201ENST00000373316 SLC24A1O60721 1099 aa14.27□□□□□ -0.12
PGK1-201ENST00000373316 EIF4G2P78344 907 aaKnown RBP eCLIP14.27□□□□□ -0.133e-16■■■■□ 22.7
PGK1-201ENST00000373316 HNRNPMP52272 730 aaKnown RBP eCLIP14.26□□□□□ -0.132e-12■■■□□ 18.3
PGK1-201ENST00000373316 ZNF326Q5BKZ1 582 aaKnown RBP14.26□□□□□ -0.13
PGK1-201ENST00000373316 KIF14Q15058 1648 aa14.26□□□□□ -0.13
PGK1-201ENST00000373316 ATP10BO94823 1461 aa14.25□□□□□ -0.13
PGK1-201ENST00000373316 SETD5Q9C0A6 1442 aa14.25□□□□□ -0.13
PGK1-201ENST00000373316 CANXP27824 592 aaKnown RBP14.25□□□□□ -0.13
PGK1-201ENST00000373316 SUPT6HQ7KZ85 1726 aaKnown RBP14.24□□□□□ -0.13
PGK1-201ENST00000373316 CCDC18Q5T9S5 1454 aa14.24□□□□□ -0.13
PGK1-201ENST00000373316 EHBP1L1Q8N3D4 1523 aa14.24□□□□□ -0.13
PGK1-201ENST00000373316 EIF5BO60841 1220 aaKnown RBP14.23□□□□□ -0.13
PGK1-201ENST00000373316 ARHGEF11O15085 1522 aa14.23□□□□□ -0.13
PGK1-201ENST00000373316 CDCA8Q53HL2 280 aa14.21□□□□□ -0.13
PGK1-201ENST00000373316 PTPN23Q9H3S7 1636 aa14.21□□□□□ -0.13
PGK1-201ENST00000373316 OSCARQ8IYS5 282 aa14.21□□□□□ -0.14
PGK1-201ENST00000373316 HNRNPUQ00839 825 aaKnown RBP eCLIP14.19□□□□□ -0.14
PGK1-201ENST00000373316 FKBP8Q14318 412 aa14.18□□□□□ -0.14
PGK1-201ENST00000373316 UPF2Q9HAU5 1272 aaKnown RBP14.18□□□□□ -0.14
PGK1-201ENST00000373316 TROQ12816 1431 aaPredicted RBP14.18□□□□□ -0.14
PGK1-201ENST00000373316 DDX10Q13206 875 aaKnown RBP14.17□□□□□ -0.14
PGK1-201ENST00000373316 KDM6BO15054 1643 aa14.17□□□□□ -0.14
PGK1-201ENST00000373316 CYB5RLQ6IPT4 315 aa14.16□□□□□ -0.14
PGK1-201ENST00000373316 BCANQ96GW7 911 aa14.16□□□□□ -0.14
PGK1-201ENST00000373316 UACAQ9BZF9 1416 aa14.16□□□□□ -0.14
PGK1-201ENST00000373316 NPM1P06748 294 aaKnown RBP eCLIP14.16□□□□□ -0.14
PGK1-201ENST00000373316 ERICH6BQ5W0A0 696 aa14.16□□□□□ -0.14
PGK1-201ENST00000373316 CCER2I3L3R5 266 aa14.16□□□□□ -0.14
PGK1-201ENST00000373316 TMC1Q8TDI8 760 aa14.15□□□□□ -0.14
PGK1-201ENST00000373316 ABCA8O94911 1581 aa14.15□□□□□ -0.14
PGK1-201ENST00000373316 NAIPQ13075 1403 aa14.14□□□□□ -0.15
PGK1-201ENST00000373316 GPATCH8Q9UKJ3 1502 aaKnown RBP14.14□□□□□ -0.15
PGK1-201ENST00000373316 MAPKBP1O60336 1514 aa14.13□□□□□ -0.15
PGK1-201ENST00000373316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.157e-21■■□□□ 14.1
PGK1-201ENST00000373316 ABCC5O15440 1437 aa14.12□□□□□ -0.15
PGK1-201ENST00000373316 MIER1Q8N108 512 aa14.11□□□□□ -0.15
PGK1-201ENST00000373316 DDRGK1Q96HY6 314 aa14.11□□□□□ -0.15
PGK1-201ENST00000373316 CNGB1Q14028 1251 aaPredicted RBP14.1□□□□□ -0.15
PGK1-201ENST00000373316 MRS2Q9HD23 443 aa14.1□□□□□ -0.15
PGK1-201ENST00000373316 CAMSAP2Q08AD1 1489 aa14.1□□□□□ -0.15
PGK1-201ENST00000373316 DAPK1P53355 1430 aa14.09□□□□□ -0.15
PGK1-201ENST00000373316 ANP32EQ9BTT0 268 aa14.09□□□□□ -0.15
PGK1-201ENST00000373316 CLASP1Q7Z460 1538 aa14.09□□□□□ -0.15
PGK1-201ENST00000373316 WDR43Q15061 677 aaKnown RBP eCLIP14.09□□□□□ -0.15
PGK1-201ENST00000373316 CCDC136Q96JN2 1154 aa14.07□□□□□ -0.16
PGK1-201ENST00000373316 HFM1A2PYH4 1435 aa14.07□□□□□ -0.16
PGK1-201ENST00000373316 AFAP1Q8N556 730 aa14.07□□□□□ -0.16
PGK1-201ENST00000373316 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
PGK1-201ENST00000373316 MPHOSPH9Q99550 1183 aa14.06□□□□□ -0.16
PGK1-201ENST00000373316 ANP32BQ92688 251 aaKnown RBP14.06□□□□□ -0.16
PGK1-201ENST00000373316 SHROOM2Q13796 1616 aa14.06□□□□□ -0.16
PGK1-201ENST00000373316 TTC37Q6PGP7 1564 aa14.04□□□□□ -0.16
PGK1-201ENST00000373316 ARID4BQ4LE39 1312 aaPredicted RBP14.04□□□□□ -0.16
PGK1-201ENST00000373316 MIA2Q96PC5 1412 aa14.03□□□□□ -0.16
PGK1-201ENST00000373316 ABCC2Q92887 1545 aa14.02□□□□□ -0.16
PGK1-201ENST00000373316 ABCC10Q5T3U5 1492 aa14.02□□□□□ -0.16
PGK1-201ENST00000373316 ESF1Q9H501 851 aaKnown RBP14.02□□□□□ -0.16
PGK1-201ENST00000373316 TCOF1Q13428 1488 aaKnown RBP14.02□□□□□ -0.17
PGK1-201ENST00000373316 ARHGAP5Q13017 1502 aa14.02□□□□□ -0.17
PGK1-201ENST00000373316 FAM9BQ8IZU0 186 aa14.02□□□□□ -0.17
PGK1-201ENST00000373316 CDC42BPAQ5VT25 1732 aa14.01□□□□□ -0.17
PGK1-201ENST00000373316 SENP3Q9H4L4 574 aaPredicted RBP14.01□□□□□ -0.17
PGK1-201ENST00000373316 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14□□□□□ -0.174e-13■■■■■ 30.7
PGK1-201ENST00000373316 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.99□□□□□ -0.172e-10■□□□□ 10.1
PGK1-201ENST00000373316 ZCCHC11Q5TAX3 1644 aaKnown RBP13.99□□□□□ -0.17
PGK1-201ENST00000373316 CHMP4BQ9H444 224 aaKnown RBP13.99□□□□□ -0.17
PGK1-201ENST00000373316 DENND4BO75064 1496 aaPredicted RBP13.99□□□□□ -0.17
PGK1-201ENST00000373316 ADCY10Q96PN6 1610 aa13.98□□□□□ -0.17
PGK1-201ENST00000373316 PKD2Q13563 968 aa13.98□□□□□ -0.17
PGK1-201ENST00000373316 PPP4R2Q9NY27 417 aa13.97□□□□□ -0.17
PGK1-201ENST00000373316 SYCP2Q9BX26 1530 aa13.97□□□□□ -0.17
PGK1-201ENST00000373316 NCOA1Q15788 1441 aa13.97□□□□□ -0.17
PGK1-201ENST00000373316 MS4A1P11836 297 aa13.96□□□□□ -0.17
PGK1-201ENST00000373316 C9orf84Q5VXU9 1444 aa13.96□□□□□ -0.17
PGK1-201ENST00000373316 BECN1Q14457 450 aa13.96□□□□□ -0.18
PGK1-201ENST00000373316 CFAP53Q96M91 514 aa13.96□□□□□ -0.18
PGK1-201ENST00000373316 KDM2AQ9Y2K7 1162 aa13.95□□□□□ -0.18
PGK1-201ENST00000373316 NUP155O75694 1391 aa13.95□□□□□ -0.18
PGK1-201ENST00000373316 AKNAQ7Z591 1439 aa13.95□□□□□ -0.18
PGK1-201ENST00000373316 DNMT1P26358 1616 aaKnown RBP13.95□□□□□ -0.18
PGK1-201ENST00000373316 ARHGEF12Q9NZN5 1544 aa13.94□□□□□ -0.18
PGK1-201ENST00000373316 RSPH4AQ5TD94 716 aa13.94□□□□□ -0.18
PGK1-201ENST00000373316 KIF15Q9NS87 1388 aa13.94□□□□□ -0.18
PGK1-201ENST00000373316 SAMD9LQ8IVG5 1584 aa13.94□□□□□ -0.18
PGK1-201ENST00000373316 CDC42BPBQ9Y5S2 1711 aa13.94□□□□□ -0.18
PGK1-201ENST00000373316 ASXL2Q76L83 1435 aa13.94□□□□□ -0.18
PGK1-201ENST00000373316 L3MBTL2Q969R5 705 aa13.93□□□□□ -0.18
PGK1-201ENST00000373316 ROCK2O75116 1388 aaKnown RBP13.93□□□□□ -0.18
PGK1-201ENST00000373316 RGL3Q3MIN7 710 aa13.93□□□□□ -0.18
PGK1-201ENST00000373316 TRAPPC8Q9Y2L5 1435 aa13.93□□□□□ -0.18
PGK1-201ENST00000373316 KANK1Q14678 1352 aa13.93□□□□□ -0.18
PGK1-201ENST00000373316 ANKRD50Q9ULJ7 1429 aa13.92□□□□□ -0.18
PGK1-201ENST00000373316 ANKRD30AQ9BXX3 1397 aa13.92□□□□□ -0.18
PGK1-201ENST00000373316 STAG3Q9UJ98 1225 aa13.92□□□□□ -0.18
PGK1-201ENST00000373316 PPM1GO15355 546 aaPredicted RBP13.92□□□□□ -0.18
PGK1-201ENST00000373316 PPP1R15AO75807 674 aaPredicted RBP13.92□□□□□ -0.18
PGK1-201ENST00000373316 RAPGEF3O95398 923 aa13.92□□□□□ -0.18
PGK1-201ENST00000373316 EFCAB2Q5VUJ9 269 aa13.92□□□□□ -0.18
PGK1-201ENST00000373316 PNNQ9H307 717 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms