RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 ZMYM4Q5VZL5 1548 aa36.4■■■■□ 3.42
COL9A2-201ENST00000372736 ARHGEF40Q8TER5 1519 aa36.39■■■■□ 3.42
COL9A2-201ENST00000372736 POGZQ7Z3K3 1410 aa36.37■■■■□ 3.41
COL9A2-201ENST00000372736 EFCAB2Q5VUJ9 269 aa36.37■■■■□ 3.41
COL9A2-201ENST00000372736 SCAPERQ9BY12 1400 aa36.36■■■■□ 3.41
COL9A2-201ENST00000372736 CDC42BPAQ5VT25 1732 aa36.36■■■■□ 3.41
COL9A2-201ENST00000372736 ZFYVE16Q7Z3T8 1539 aa36.26■■■■□ 3.4
COL9A2-201ENST00000372736 EHBP1L1Q8N3D4 1523 aa36.26■■■■□ 3.4
COL9A2-201ENST00000372736 VPS8Q8N3P4 1428 aa36.25■■■■□ 3.39
COL9A2-201ENST00000372736 MTUS2Q5JR59 1369 aa36.25■■■■□ 3.39
COL9A2-201ENST00000372736 MAGI2Q86UL8 1455 aa36.24■■■■□ 3.39
COL9A2-201ENST00000372736 ABCC1P33527 1531 aa36.24■■■■□ 3.39
COL9A2-201ENST00000372736 YEATS2Q9ULM3 1422 aa36.23■■■■□ 3.39
COL9A2-201ENST00000372736 KDM5CP41229 1560 aa36.21■■■■□ 3.39
COL9A2-201ENST00000372736 ZNF518AQ6AHZ1 1483 aa36.21■■■■□ 3.39
COL9A2-201ENST00000372736 GPATCH8Q9UKJ3 1502 aaKnown RBP36.21■■■■□ 3.39
COL9A2-201ENST00000372736 ITSN2Q9NZM3 1697 aa36.19■■■■□ 3.38
COL9A2-201ENST00000372736 TIAM1Q13009 1591 aa36.17■■■■□ 3.38
COL9A2-201ENST00000372736 ARHGEF12Q9NZN5 1544 aa36.16■■■■□ 3.38
COL9A2-201ENST00000372736 BCORL1Q5H9F3 1711 aa36.16■■■■□ 3.38
COL9A2-201ENST00000372736 ADAMTSL3P82987 1691 aa36.16■■■■□ 3.38
COL9A2-201ENST00000372736 SIGLEC1Q9BZZ2 1709 aa36.15■■■■□ 3.38
COL9A2-201ENST00000372736 SAMD9LQ8IVG5 1584 aa36.15■■■■□ 3.38
COL9A2-201ENST00000372736 CCNB3Q8WWL7 1395 aa36.11■■■■□ 3.37
COL9A2-201ENST00000372736 HECW2Q9P2P5 1572 aa36.1■■■■□ 3.37
COL9A2-201ENST00000372736 AFAP1Q8N556 730 aa36.09■■■■□ 3.37
COL9A2-201ENST00000372736 TRAPPC8Q9Y2L5 1435 aa36.08■■■■□ 3.37
COL9A2-201ENST00000372736 SYCP2Q9BX26 1530 aa36.05■■■■□ 3.36
COL9A2-201ENST00000372736 SUPT6HQ7KZ85 1726 aaKnown RBP36.05■■■■□ 3.36
COL9A2-201ENST00000372736 ARID4BQ4LE39 1312 aaPredicted RBP36.05■■■■□ 3.36
COL9A2-201ENST00000372736 ATP10AO60312 1499 aa36.04■■■■□ 3.36
COL9A2-201ENST00000372736 MADDQ8WXG6 1647 aa36.03■■■■□ 3.36
COL9A2-201ENST00000372736 C9orf84Q5VXU9 1444 aa36.02■■■■□ 3.36
COL9A2-201ENST00000372736 MLH3Q9UHC1 1453 aa36.02■■■■□ 3.36
COL9A2-201ENST00000372736 DIP2CQ9Y2E4 1556 aa36.02■■■■□ 3.36
COL9A2-201ENST00000372736 ABCA6Q8N139 1617 aa36.01■■■■□ 3.35
COL9A2-201ENST00000372736 NCOA2Q15596 1464 aa36■■■■□ 3.35
COL9A2-201ENST00000372736 MAP3K1Q13233 1512 aa36■■■■□ 3.35
COL9A2-201ENST00000372736 CFDP1Q9UEE9 299 aaPredicted RBP36■■■■□ 3.35
COL9A2-201ENST00000372736 ZNF777Q9ULD5 760 aaPredicted RBP36■■■■□ 3.35
COL9A2-201ENST00000372736 LRRC9Q6ZRR7 1453 aa35.99■■■■□ 3.35
COL9A2-201ENST00000372736 PLEKHH2Q8IVE3 1493 aa35.98■■■■□ 3.35
COL9A2-201ENST00000372736 KIAA1107Q9UPP5 1409 aa35.97■■■■□ 3.35
COL9A2-201ENST00000372736 KIDINS220Q9ULH0 1771 aa35.96■■■■□ 3.35
COL9A2-201ENST00000372736 PTPRMP28827 1452 aa35.94■■■■□ 3.34
COL9A2-201ENST00000372736 REREQ9P2R6 1566 aa35.93■■■■□ 3.34
COL9A2-201ENST00000372736 RIMS1Q86UR5 1692 aaKnown RBP35.91■■■■□ 3.34
COL9A2-201ENST00000372736 HNRNPMP52272 730 aaKnown RBP eCLIP35.88■■■■□ 3.33
COL9A2-201ENST00000372736 MYT1LQ9UL68 1186 aa35.87■■■■□ 3.33
COL9A2-201ENST00000372736 INO80Q9ULG1 1556 aaPredicted RBP35.86■■■■□ 3.33
COL9A2-201ENST00000372736 ZNF644Q9H582 1327 aaPredicted RBP35.85■■■■□ 3.33
COL9A2-201ENST00000372736 FER1L4A9Z1Z3 1794 aa35.84■■■■□ 3.33
COL9A2-201ENST00000372736 KANK4Q5T7N3 995 aaPredicted RBP35.84■■■■□ 3.33
COL9A2-201ENST00000372736 MBD5Q9P267 1494 aa35.82■■■■□ 3.32
COL9A2-201ENST00000372736 ATP7AQ04656 1500 aa35.82■■■■□ 3.32
COL9A2-201ENST00000372736 CAMSAP2Q08AD1 1489 aa35.8■■■■□ 3.32
COL9A2-201ENST00000372736 AGLP35573 1532 aa35.79■■■■□ 3.32
COL9A2-201ENST00000372736 MLECQ14165 292 aa35.79■■■■□ 3.32
COL9A2-201ENST00000372736 SPAG9O60271 1321 aaKnown RBP35.79■■■■□ 3.32
COL9A2-201ENST00000372736 PLXNC1O60486 1568 aa35.69■■■■□ 3.3
COL9A2-201ENST00000372736 CCDC141Q6ZP82 1450 aa35.68■■■■□ 3.3
COL9A2-201ENST00000372736 MYOM3Q5VTT5 1437 aa35.67■■■■□ 3.3
COL9A2-201ENST00000372736 ARHGEF5Q12774 1597 aa35.67■■■■□ 3.3
COL9A2-201ENST00000372736 APLP2Q06481 763 aa35.66■■■■□ 3.3
COL9A2-201ENST00000372736 ADGBQ8N7X0 1667 aa35.65■■■■□ 3.3
COL9A2-201ENST00000372736 RTEL1-TNFRSF6BF6WH68 1400 aa35.63■■■■□ 3.29
COL9A2-201ENST00000372736 A2MP01023 1474 aa35.62■■■■□ 3.29
COL9A2-201ENST00000372736 MIA2Q96PC5 1412 aa35.61■■■■□ 3.29
COL9A2-201ENST00000372736 RSPH4AQ5TD94 716 aa35.55■■■■□ 3.28
COL9A2-201ENST00000372736 LMTK3Q96Q04 1460 aa35.54■■■■□ 3.28
COL9A2-201ENST00000372736 PLPPR3Q6T4P5 718 aa35.53■■■■□ 3.28
COL9A2-201ENST00000372736 C3P01024 1663 aa35.49■■■■□ 3.27
COL9A2-201ENST00000372736 MAST1Q9Y2H9 1570 aa35.49■■■■□ 3.27
COL9A2-201ENST00000372736 PTPN23Q9H3S7 1636 aa35.48■■■■□ 3.27
COL9A2-201ENST00000372736 CNTLNQ9NXG0 1405 aa35.46■■■■□ 3.27
COL9A2-201ENST00000372736 MROH2AA6NES4 1674 aa35.44■■■■□ 3.26
COL9A2-201ENST00000372736 DHX29Q7Z478 1369 aaKnown RBP35.44■■■■□ 3.26
COL9A2-201ENST00000372736 CEBPAP49715 358 aaPredicted RBP35.44■■■■□ 3.26
COL9A2-201ENST00000372736 FGD6Q6ZV73 1430 aa35.43■■■■□ 3.26
COL9A2-201ENST00000372736 PREX1Q8TCU6 1659 aa35.42■■■■□ 3.26
COL9A2-201ENST00000372736 CROCC2H7BZ55 1655 aa35.4■■■■□ 3.26
COL9A2-201ENST00000372736 TSPY4P0CV99 314 aa35.4■■■■□ 3.26
COL9A2-201ENST00000372736 TSPY10P0CW01 314 aa35.4■■■■□ 3.26
COL9A2-201ENST00000372736 ESF1Q9H501 851 aaKnown RBP35.4■■■■□ 3.26
COL9A2-201ENST00000372736 TCOF1Q13428 1488 aaKnown RBP35.4■■■■□ 3.26
COL9A2-201ENST00000372736 CLTCQ00610 1675 aaKnown RBP35.39■■■■□ 3.26
COL9A2-201ENST00000372736 DNMT1P26358 1616 aaKnown RBP35.33■■■■□ 3.25
COL9A2-201ENST00000372736 SHANK2Q9UPX8 1470 aa35.33■■■■□ 3.25
COL9A2-201ENST00000372736 GGT6Q6P531 493 aa35.32■■■■□ 3.24
COL9A2-201ENST00000372736 SETD1BQ9UPS6 1966 aaKnown RBP35.32■■■■□ 3.24
COL9A2-201ENST00000372736 ABCC5O15440 1437 aa35.32■■■■□ 3.24
COL9A2-201ENST00000372736 ZMYM3Q14202 1370 aa35.27■■■■□ 3.24
COL9A2-201ENST00000372736 DAPK1P53355 1430 aa35.27■■■■□ 3.24
COL9A2-201ENST00000372736 PPP6R1Q9UPN7 881 aa35.27■■■■□ 3.24
COL9A2-201ENST00000372736 KIF3BO15066 747 aa35.26■■■■□ 3.24
COL9A2-201ENST00000372736 HSPA2P54652 639 aa35.26■■■■□ 3.24
COL9A2-201ENST00000372736 UHRF1BP1Q6BDS2 1440 aa35.25■■■■□ 3.23
COL9A2-201ENST00000372736 FAM135AQ9P2D6 1515 aa35.25■■■■□ 3.23
COL9A2-201ENST00000372736 EIF2AK4Q9P2K8 1649 aaKnown RBP35.24■■■■□ 3.23
COL9A2-201ENST00000372736 NPATQ14207 1427 aa35.24■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms